EY757188

Overview
NameEY757188
Unique NameEY757188
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY757188_ssr298 microsatellite EY757188_ssr298:298..307. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY757188 vs. ExPASy Swiss-Prot
Match: DOM3Z_ARATH (Protein Dom3z homolog, chloroplastic OS=Arabidopsis thaliana GN=At4g17620 PE=1 SV=1)

HSP 1 Score: 350.517 bits (898), Expect = 7.818e-96
Identity = 163/207 (78.74%), Postives = 183/207 (88.41%), Query Frame = 1
Query:    7 VRKVQERPKSELDRRRCYWGYCFESLATEDPRRADGEGIHHIDANVEFCAVMKTKLGAHRLLMGAEMDCCDSTDDGRRFYVELKTSRELDYHTEERFEREKLLKFWIQSFLAGVPFIVVGFRDDAGRLVRTERLRTKDITHRVKMKNYWQGGVCLAFADEVLCWLYGTVKENEDYTLHFNPPSNRLELLQASSCPESITCHVEQLQN 627
            V K+ ERP+S+LDRRRCYWGYCFESLATEDP RA GE IHH+DANVEFC+V++TKLGAHR++MGAEMDCCD +D G+RFYVELKT+RELD  T +RFEREKLLKFWIQSF+AGVP+IVVGFRDD GRLVRTERL T+DI HR ++KNYWQGGVCLAFADEVLCWLYGTVKENEDY L F  P  RLELLQA SCP++IT HV  LQN
Sbjct:  329 VHKLPERPQSDLDRRRCYWGYCFESLATEDPGRAYGEEIHHVDANVEFCSVVRTKLGAHRVMMGAEMDCCDVSDKGKRFYVELKTTRELDDRTVDRFEREKLLKFWIQSFVAGVPYIVVGFRDDGGRLVRTERLTTRDIAHRARLKNYWQGGVCLAFADEVLCWLYGTVKENEDYILQFVHPFMRLELLQAQSCPDAITNHVHLLQN 535          
BLAST of EY757188 vs. ExPASy Swiss-Prot
Match: DOM3Z_EMENI (Protein rai1 OS=Emericella nidulans GN=rai1 PE=3 SV=3)

HSP 1 Score: 115.931 bits (289), Expect = 3.241e-25
Identity = 72/187 (38.50%), Postives = 108/187 (57.75%), Query Frame = 1
Query:   58 YWGYCFESLAT-----EDPRRADGEGIHH--IDANVEFCAVMKTKLGAHRLLMGAEMDCCDSTDDGRRF----YVELKTSRELDYHTEE-RFEREKLLKFWIQSFLAGVPFIVVGFRDDAGRLVRTERLRTKDITHRVKM--KNYWQGGVCLAFADEVLCWLYGTVKENEDYTLHFNPPSNRLELLQ 576
            YWGY FE+++      ++  R + EG  +  ++ N ++C+V++T +G  +L++G E+D    +   R+     +VELKTS E+    +  +FER KLLKFW QSFL GVP IVVGFRD  G L R E L T +I +RV+   +  W G +C+ FA   L WL   +KE   + L     S+ +E+ Q
Sbjct:  151 YWGYKFETISVLDKTWDEASREEIEGRENLVVNNNAQYCSVVRTGIGRTKLVLGGEVDAIWDSKPERKEDPINWVELKTSAEIRKDWDMVKFER-KLLKFWAQSFLLGVPKIVVGFRDQGGILRRLEELETANIPNRVRKSGRGTWDGNICINFAATFLEWLKSVIKEGGTWRLRKAEKSSVIEVYQ 336          
BLAST of EY757188 vs. ExPASy Swiss-Prot
Match: DOM3Z_ASPFU (Protein rai1 OS=Aspergillus fumigatus GN=rai1 PE=3 SV=3)

HSP 1 Score: 111.309 bits (277), Expect = 7.982e-24
Identity = 69/186 (37.10%), Postives = 103/186 (55.38%), Query Frame = 1
Query:   58 YWGYCFESLATE----DPR-RADGEGIHH--IDANVEFCAVMKTKLGAHRLLMGAEMD----CCDSTDDGRRFYVELKTSRELDYHTEERFEREKLLKFWIQSFLAGVPFIVVGFRDDAGRLVRTERLRTKDITHRVKM--KNYWQGGVCLAFADEVLCWLYGTVKENEDYTLHFNPPSNRLELLQ 576
            YWGY FE+L       DP  RA+ E      ++ N ++C+V++T +G+ RL++G E+D    C     +    +VELKTS E+    +      KLLKFW QSFL GVP I+VGFRD+ G + R E L T  I ++VK   +  W G +C+ FA   L WL  T+KE   + +     S+ +++ +
Sbjct:  159 YWGYKFETLCLLQQPWDPTPRAEIESREDLVVNNNAQYCSVVRTGIGSTRLIIGGEVDAVWDCKPDRKEDPINWVELKTSAEIRNDRDMIKYERKLLKFWAQSFLLGVPKIIVGFRDNHGIVHRLEELETASIPNKVKKLGRGTWDGNICINFAAAFLEWLKSTIKEGGTWRIRKLEKSSLIQVFK 344          
BLAST of EY757188 vs. ExPASy Swiss-Prot
Match: DOM3Z_XENLA (Protein Dom3Z OS=Xenopus laevis GN=dom3z PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.505e-22
Identity = 63/176 (35.80%), Postives = 98/176 (55.68%), Query Frame = 1
Query:   19 QERPKSELDRRRC-YWGYCFES-LATEDPRRADGEGIHHIDANVEFCAVMKTKLGAHRLLMGAEMDCCDSTDDGR---RFYVELKTSREL-DYHTEERFEREKLLKFWIQSFLAGVPFIVVGFRDDAGRLVRTERLRTKDITHRVK-MKNYWQGGVCLAFADEVLCWLYGTVKENE 525
            ++R +  L++ R  Y GY FES +  + P R   +    ++ N  FC+V+  +L +H LL+  E+DC D +         Y+ELK+S ++ + H +  F R KLLK+W QSFL G+P IV GFR   GR+V  E  +T DI H V+  +N W   VC+ F ++ L  +   V  ++
Sbjct:  190 KKRKERSLEQERLMYSGYKFESYICADSPDRQPSQSAV-VNTNEGFCSVLLARLTSHSLLISGEVDCTDPSAKKSIPPTCYIELKSSAQIRNPHQQRSFNRYKLLKWWCQSFLLGIPIIVAGFRSPEGRIVSLETFKTSDIPHLVRGERNSWDPAVCMNFCNKFLSHIKSVVTRDD 364          
BLAST of EY757188 vs. ExPASy Swiss-Prot
Match: DOM3Z_NEUCR (Protein rai-1 OS=Neurospora crassa GN=rai-1 PE=3 SV=3)

HSP 1 Score: 100.523 bits (249), Expect = 1.409e-20
Identity = 65/188 (34.57%), Postives = 95/188 (50.53%), Query Frame = 1
Query:   58 YWGYCFESLAT-------EDPRRADGEGIHHIDANVEFCAVMKTKLGAHRLLMGAEMDCCDSTDDGRRF------YVELKTSRELDYHTEERFEREKLLKFWIQSFLAGVPFIVVGFRDDAGRLVRTERLRTKDITHRVKM--KNYWQGGVCLAFADEVLCWLYGTVKENEDYTLHFNPPSNRLELLQ 576
            YWGY FE+L+T             +    H ++   ++C+V++T +G   L +G E+D     DD  R       +VELKTS  +    +      KL+KFWIQSFL GVP I+VGFR   G LV T+  RT +I   VK   +  W G  C+ FA+  L WL  T+ +   + +   P S  +E+ +
Sbjct:  161 YWGYKFETLSTLPKPWGQTSRDFIESRPDHVVNNKEQYCSVVRTGIGKTILCIGGEVDAI--WDDKPRTQGDPINWVELKTSAVIQNERQANNFERKLMKFWIQSFLLGVPKIIVGFRTQDGLLVETKEFRTMEIPLMVKKNGRPKWDGDTCVNFANGFLEWLRHTITDEGVWRIKRRPRSAEIEVFK 346          
BLAST of EY757188 vs. ExPASy Swiss-Prot
Match: DOM3Z_HUMAN (Protein Dom3Z OS=Homo sapiens GN=DOM3Z PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.840e-20
Identity = 61/181 (33.70%), Postives = 93/181 (51.38%), Query Frame = 1
Query:   13 KVQERPKSELDRRRCYWGYCFESLATEDPRRADGEGIHHIDANVEFCAVMKTKLGAHRLLMGAEMDCCDSTDDGRR---FYVELKTSRELDYHTEER-FEREKLLKFWIQSFLAGVPFIVVGFRDDAGRLVRTERLRTKDITHRVKM-KNYWQGGVCLAFADEVLCWLYGTVKENEDYTLH 540
            + Q   +  L R   Y GY FE     D   +  +    ++ NV FC+V++++LG+H LL   E+DC D      +    YVELKTS+E+    + R F R KLLK+W QSFL GVP +V GFR+  G +   +   T  +   V+  ++ W   VC+ F    L +   TV +++   +H
Sbjct:  171 RAQRLARPPLLRELMYMGYKFEQYMCADKPGSSPDPSGEVNTNVAFCSVLRSRLGSHPLLFSGEVDCTDPQAPSTQPPTCYVELKTSKEMHSPGQWRSFYRHKLLKWWAQSFLPGVPNVVAGFRNPDGFVSSLKTFPTMKMFEYVRNDRDGWNPSVCMNFCAAFLSFAQSTVVQDDPRLVH 351          
BLAST of EY757188 vs. ExPASy Swiss-Prot
Match: DOM3Z_RAT (Protein Dom3Z OS=Rattus norvegicus GN=Dom3z PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.403e-20
Identity = 60/181 (33.15%), Postives = 92/181 (50.83%), Query Frame = 1
Query:   13 KVQERPKSELDRRRCYWGYCFESLATEDPRRADGEGIHHIDANVEFCAVMKTKLGAHRLLMGAEMDCCDSTDDGRR---FYVELKTSRELDYHTEER-FEREKLLKFWIQSFLAGVPFIVVGFRDDAGRLVRTERLRTKDITHRVKM-KNYWQGGVCLAFADEVLCWLYGTVKENEDYTLH 540
            + Q   +  L R   Y GY FE     D      +    ++ NV FC+V++++LG H LL   E+DC +      +    YVELKTS+E+    + R F R KLLK+W QSFL GVP++V GFR+  G +   +   T ++   V+  +  W   VC+ F    L +   TV +++   +H
Sbjct:  171 RAQRLARPPLLRELMYMGYKFEQYMCADKPGGSPDPSGEVNTNVAFCSVLRSRLGNHPLLFSGEVDCLNPQAPCTQPPSCYVELKTSKEMHSPGQWRSFYRHKLLKWWAQSFLPGVPYVVAGFRNPEGFVCSLKTFPTMEMFENVRNDQEGWNPSVCMNFCAAFLSFAQSTVVQDDPRLVH 351          
BLAST of EY757188 vs. ExPASy Swiss-Prot
Match: DOM3Z_BOVIN (Protein Dom3Z OS=Bos taurus GN=DOM3Z PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.133e-20
Identity = 59/176 (33.52%), Postives = 90/176 (51.14%), Query Frame = 1
Query:   13 KVQERPKSELDRRRCYWGYCFESLATEDPRRADGEGIHHIDANVEFCAVMKTKLGAHRLLMGAEMDCCDSTDDGRR---FYVELKTSRELDYHTE-ERFEREKLLKFWIQSFLAGVPFIVVGFRDDAGRLVRTERLRTKDITHRVKM-KNYWQGGVCLAFADEVLCWLYGTVKENE 525
            +VQ   +  L R   Y GY FE     D      +    ++ NV FC+V++++LG H LL   E+DC D      +    YVELKTS+E+    + + F R KLLK+W QSFL GVP +V GFR+  G +   +   T ++   V+  ++ W   VC+ F    L +   T  +++
Sbjct:  171 RVQRLTRPPLLRELMYMGYKFEQYMCADKPGVSPDPSGEVNTNVAFCSVLRSRLGNHPLLFSGEVDCTDPQAPSTQPPTCYVELKTSKEMHSPGQWKSFYRHKLLKWWAQSFLPGVPNVVAGFRNPEGFVCSLKTFPTMEMFEYVRNDRDGWNPSVCMNFCAAFLSFAQNTAVQDD 346          
BLAST of EY757188 vs. ExPASy Swiss-Prot
Match: DOM3Z_MOUSE (Protein Dom3Z OS=Mus musculus GN=Dom3z PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.193e-19
Identity = 59/181 (32.60%), Postives = 91/181 (50.28%), Query Frame = 1
Query:   13 KVQERPKSELDRRRCYWGYCFESLATEDPRRADGEGIHHIDANVEFCAVMKTKLGAHRLLMGAEMDCCDSTDDGRR---FYVELKTSRELDYHTEER-FEREKLLKFWIQSFLAGVPFIVVGFRDDAGRLVRTERLRTKDITHRVKM-KNYWQGGVCLAFADEVLCWLYGTVKENEDYTLH 540
            + Q   +  L R   Y GY FE     D      +    ++ NV +C+V++++LG H LL   E+DC +      +    YVELKTS+E+    + R F R KLLK+W QSFL GVP +V GFR+  G +   +   T ++   V+  +  W   VC+ F    L +   TV +++   +H
Sbjct:  171 RAQRLARPPLLRELMYMGYKFEQYMCADKPGGSPDPSGEVNTNVAYCSVLRSRLGNHPLLFSGEVDCLNPQAPCTQPPSCYVELKTSKEMHSPGQWRSFYRHKLLKWWAQSFLPGVPHVVAGFRNPEGFVCSLKTFPTMEMFENVRNDREGWNPSVCMNFCAAFLSFAQSTVVQDDPRLVH 351          
BLAST of EY757188 vs. ExPASy Swiss-Prot
Match: DOM3Z_SCHPO (Protein din1 OS=Schizosaccharomyces pombe GN=din1 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.837e-18
Identity = 70/224 (31.25%), Postives = 105/224 (46.88%), Query Frame = 1
Query:   16 VQERPKSELDR----RRCYWGYCFESLATEDPRRADGEGIHHIDA--------NVEFCAVMKTKLGAHRLLMGAEMDC------CDS------TDDG------------RRFYVELKTSRELDYHTEERFEREKLLKFWIQSFLAGVPFIVVGFRDDAGRLVRTERLRTKDITHRVK---MKNYWQGGVCLAFADEVLCWLYGTVKENEDYTLHFNPPSNRLEL 570
            ++ER +SE       R CYWGY FE+++T  P   D      I+         + ++C+++K  +G  +L++  E+DC      C +      +DDG               YVELKTS++  Y  E    R+KLLK+W QSFL G+  I++GFRDD G L+  + L T  I   ++     N W     L   +  L W+  TVK+        +PPS    L
Sbjct:  126 MEERTRSETSYANQDRMCYWGYKFEAISTL-PEIWDACSRDQIEQRDNQDVVPDEQYCSIVKINIGKSKLILAGEVDCIWDKKPCSAKESDVHSDDGTIEEDASNAENPNLHYVELKTSKK--YPLENYGMRKKLLKYWAQSFLLGIGRIIIGFRDDNGILIEMKELFTHQIPKMLRPYFKPNDWTPNRLLVVLEHALEWIKQTVKQ--------HPPSTEFTL 338          
The following BLAST results are available for this feature:
BLAST of EY757188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
DOM3Z_ARATH7.818e-9678.74Protein Dom3z homolog, chloroplastic OS=Arabidopsi... [more]
DOM3Z_EMENI3.241e-2538.50Protein rai1 OS=Emericella nidulans GN=rai1 PE=3 S... [more]
DOM3Z_ASPFU7.982e-2437.10Protein rai1 OS=Aspergillus fumigatus GN=rai1 PE=3... [more]
DOM3Z_XENLA1.505e-2235.80Protein Dom3Z OS=Xenopus laevis GN=dom3z PE=2 SV=1[more]
DOM3Z_NEUCR1.409e-2034.57Protein rai-1 OS=Neurospora crassa GN=rai-1 PE=3 S... [more]
DOM3Z_HUMAN1.840e-2033.70Protein Dom3Z OS=Homo sapiens GN=DOM3Z PE=1 SV=2[more]
DOM3Z_RAT2.403e-2033.15Protein Dom3Z OS=Rattus norvegicus GN=Dom3z PE=2 S... [more]
DOM3Z_BOVIN9.133e-2033.52Protein Dom3Z OS=Bos taurus GN=DOM3Z PE=2 SV=1[more]
DOM3Z_MOUSE1.193e-1932.60Protein Dom3Z OS=Mus musculus GN=Dom3z PE=1 SV=2[more]
DOM3Z_SCHPO3.837e-1831.25Protein din1 OS=Schizosaccharomyces pombe GN=din1 ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-018-E02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757188 ID=EY757188; Name=EY757188; organism=Citrus sinensis; type=EST; length=926bp
CCACGCGTCCGCAAAGTACAAGAAAGGCCAAAAAGTGAGTTGGATCGCCG
AAGATGTTACTGGGGTTATTGTTTCGAGAGCCTTGCCACTGAAGATCCTA
GAAGAGCTGACGGAGAAGGGATACATCATATTGATGCCAATGTTGAATTC
TGTGCTGTGATGAAAACCAAATTAGGGGCTCATCGTCTTTTGATGGGTGC
TGAAATGGATTGCTGTGACTCAACTGATGATGGAAGGAGGTTTTATGTGG
AGTTAAAGACAAGTCGTGAGCTGGATTATCATACTGAAGAAAGATTTGAG
AGAGAGAAACTGCTCAAGTTTTGGATTCAATCTTTCCTGGCTGGTGTTCC
ATTTATCGTTGTTGGATTTAGGGATGATGCAGGTCGACTTGTTCGTACAG
AGAGACTAAGAACCAAAGATATTACTCACAGAGTGAAAATGAAGAATTAT
TGGCAGGGTGGAGTTTGTTTGGCATTTGCCGATGAGGTATTATGCTGGCT
CTATGGAACAGTAAAAGAAAATGAAGATTACACATTGCATTTTAATCCAC
CATCCAACCGACTGGAGCTTCTACAAGCCTCTTCTTGCCCAGAGTCAATT
ACTTGCCACGTCGAGCAATTACAAAATATTTAGATACTTGACTTGATGAT
ACTTTTCATAANTGAAATACAGATACGGAGGGGAGTTATATTGAAATACA
GGAATGAAAGGAGGGTAGNTTAAATATTGGTGGTATCANGATATTTGCTT
CAAAAAGCTGTTGTAATTTTGAGATAAAAGAACTGTGCACTTGCGAGATT
ACNTATATGCCAGGCCAAGCTAGTAGCTTACCCCAAAATAGGTGGGGGGT
GCATTTGCCACCCATTGAGTGGGGAATCTTGNTCCTTCTACAGATCATCG
GAGCTTTGAATTATTTTATGATGAAC
back to top