EY757122
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY757122 vs. ExPASy Swiss-Prot
Match: COPB1_ARATH (Coatomer subunit beta-1 OS=Arabidopsis thaliana GN=At4g31480 PE=1 SV=2) HSP 1 Score: 445.662 bits (1145), Expect = 1.718e-124 Identity = 227/296 (76.69%), Postives = 256/296 (86.49%), Query Frame = 1 Query: 13 SNVASAIDVIIFVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGELPFFSVSEEGEDTDSSKKXXXXXXXXXXXXRRPAVLADGTYATQSAASETAFSPPTIVQGTLTSGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVNKASSQALLIMVSMLQLGQSPVLPHPIDNDSFDRIVVCIRLLCNTGDNIRKIWLQSCRQSFVKMLSEKQLRESXELKGKAQISHAQPDDLIDFYHLKSRKGMSQLELEDECR*S-KRAT 897 SNVASA+DV++FVREIIE NPKLRVSIITRLLD FYQIRA +VC CALWIIGEYC SLSEVE+GI+TI QCLGELPF+SVSEE E T++SKK R+P +LADGTYATQSAASET FS PT+VQG+LTSGNLR+LLLTGDFFLGAVVACTLTKLVLRLEEVQ S+ EVNK +QALLIMVSMLQLGQSPV PHPIDNDS++RIV+CI+LLC+ D ++KIWL+SCRQSFVKM+SEKQLRE ELK K Q +HAQPDDLIDF+HLKSRKGMSQLELED+ + KRAT Sbjct: 407 SNVASALDVVVFVREIIETNPKLRVSIITRLLDTFYQIRAGKVCPCALWIIGEYCLSLSEVESGISTITQCLGELPFYSVSEESEPTETSKKIQPTSSAMVSS-RKPVILADGTYATQSAASETTFSSPTVVQGSLTSGNLRALLLTGDFFLGAVVACTLTKLVLRLEEVQSSKTEVNKTVTQALLIMVSMLQLGQSPVSPHPIDNDSYERIVLCIKLLCHRNDEMKKIWLESCRQSFVKMISEKQLREMEELKAKTQTTHAQPDDLIDFFHLKSRKGMSQLELEDQVQDDLKRAT 701
BLAST of EY757122 vs. ExPASy Swiss-Prot
Match: COPB2_ARATH (Coatomer subunit beta-2 OS=Arabidopsis thaliana GN=At4g31490 PE=1 SV=2) HSP 1 Score: 440.654 bits (1132), Expect = 5.527e-123 Identity = 225/296 (76.01%), Postives = 255/296 (86.15%), Query Frame = 1 Query: 13 SNVASAIDVIIFVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGELPFFSVSEEGEDTDSSKKXXXXXXXXXXXXRRPAVLADGTYATQSAASETAFSPPTIVQGTLTSGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVNKASSQALLIMVSMLQLGQSPVLPHPIDNDSFDRIVVCIRLLCNTGDNIRKIWLQSCRQSFVKMLSEKQLRESXELKGKAQISHAQPDDLIDFYHLKSRKGMSQLELEDECR*S-KRAT 897 SNVASA+DV++FVREIIE NPKLRVSIITRLLD FYQIRA +VC CALWIIGEYC SLSEVE+GI+TI QCLGELPF+SVSEE E T++SKK R+P +LADGTYATQSAASET FS PT+VQG+LTSGNLR+LLLTGDFFLGAVVACTLTKLVLRLEEVQ S+ EVNK SQALLIMVS+LQLGQSPV PHPIDNDS++RI++CI+LLC+ ++KIWL+SCRQSFVKM+SEKQLRE ELK K Q +HAQPDDLIDF+HLKSRKGMSQLELED+ + KRAT Sbjct: 407 SNVASALDVVVFVREIIETNPKLRVSIITRLLDTFYQIRAGKVCPCALWIIGEYCLSLSEVESGISTITQCLGELPFYSVSEESEPTETSKKIQPTSSAMVSS-RKPVILADGTYATQSAASETTFSSPTVVQGSLTSGNLRALLLTGDFFLGAVVACTLTKLVLRLEEVQSSKTEVNKTVSQALLIMVSILQLGQSPVSPHPIDNDSYERIMLCIKLLCHRNVEMKKIWLESCRQSFVKMISEKQLREMEELKAKTQTTHAQPDDLIDFFHLKSRKGMSQLELEDQVQDDLKRAT 701
BLAST of EY757122 vs. ExPASy Swiss-Prot
Match: COPB1_ORYSJ (Coatomer subunit beta-1 OS=Oryza sativa subsp. japonica GN=Os11g0174000 PE=2 SV=1) HSP 1 Score: 431.795 bits (1109), Expect = 2.567e-120 Identity = 214/287 (74.56%), Postives = 249/287 (86.76%), Query Frame = 1 Query: 13 SNVASAIDVIIFVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGELPFFSVSEEGEDTDSSKKXXXXXXXXXXXXRRPAVLADGTYATQSAASETAFSPPTIVQGTLTSG-NLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVNKASSQALLIMVSMLQLGQSPVLPHPIDNDSFDRIVVCIRLLCNTGDNIRKIWLQSCRQSFVKMLSEKQLRESXELKGKAQISHAQPDDLIDFYHLKSRKGMSQLELED 870 +NVA+A+DV++FVREIIE NPKLRVS+I RL+D FYQIRA+RVC+CALWI+GEY SLSEVE+ I+TIKQCLG+LPF++VSEEGE TD+SK RRP VLADGTYATQSAA+ETA S P + G+L+S NLRSL+L+GDFFL AVVACTLTKLVLRLEEVQPS+ E NKAS+ ALLIMVS+LQLGQS LPHPIDNDS+DRIV+C+RLLCNTGD++RK+WLQSCRQSF KML+EKQ RE+ E+K KAQISHAQPDDLIDFYHLKSR+GMSQLELED Sbjct: 409 TNVAAAVDVVLFVREIIETNPKLRVSMIQRLIDTFYQIRASRVCSCALWILGEYSLSLSEVESAISTIKQCLGDLPFYTVSEEGESTDASKPAQPVVNSVTVSSRRPVVLADGTYATQSAATETAISSPAVAPGSLSSTQNLRSLILSGDFFLAAVVACTLTKLVLRLEEVQPSKAEANKASTGALLIMVSILQLGQSSYLPHPIDNDSYDRIVLCVRLLCNTGDDVRKVWLQSCRQSFTKMLAEKQFRETEEMKAKAQISHAQPDDLIDFYHLKSRRGMSQLELED 695
BLAST of EY757122 vs. ExPASy Swiss-Prot
Match: COPB2_ORYSJ (Coatomer subunit beta-2 OS=Oryza sativa subsp. japonica GN=Os01g0281400 PE=3 SV=1) HSP 1 Score: 424.091 bits (1089), Expect = 5.353e-118 Identity = 211/288 (73.26%), Postives = 249/288 (86.46%), Query Frame = 1 Query: 13 SNVASAIDVIIFVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGELPFFSVSEEGEDTDSSKKXXXXXXXXXXXXRRPAVLADGTYATQSAASETAFSPPTIVQGTLTSG-NLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVNKASSQALLIMVSMLQLGQSPVLPHPIDNDSFDRIVVCIRLLCNTGDNIRKIWLQSCRQSFVKMLSEKQLRESXELKGKAQISHAQPDDLIDFYHLKSRKGMSQLELEDE 873 +NVA+A+DV++FVREIIE NPKLRVS+I RL+D FYQIRA+RVC+CALWI+GEY SLSEVEN I+TIKQCLG++PF++VSEEGE TDS+K RRP VLADGTYATQSAA+E A S P++ G+L+S NLRSL+L+GDFFL AV++CTLTKLVLRLEEVQPS VEVNKA + ALL+M S+LQLGQS LPHPIDNDS+DRIV+C+RLLCNTGD++RK+WLQSCRQSF KML+EKQ RE+ E+K KAQISHAQPDDLIDFYHLKSR+GMSQLELEDE Sbjct: 408 TNVAAAVDVVLFVREIIETNPKLRVSMIQRLIDTFYQIRASRVCSCALWILGEYSLSLSEVENAISTIKQCLGDVPFYTVSEEGEATDSAKPAQPVVNSVTVSSRRPVVLADGTYATQSAATE-AISTPSVAPGSLSSTLNLRSLILSGDFFLAAVISCTLTKLVLRLEEVQPSMVEVNKACTGALLVMTSILQLGQSSYLPHPIDNDSYDRIVLCVRLLCNTGDDVRKVWLQSCRQSFAKMLAEKQFRETEEMKAKAQISHAQPDDLIDFYHLKSRRGMSQLELEDE 694
BLAST of EY757122 vs. ExPASy Swiss-Prot
Match: COPB_DROME (Coatomer subunit beta OS=Drosophila melanogaster GN=betaCop PE=1 SV=2) HSP 1 Score: 150.214 bits (378), Expect = 1.492e-35 Identity = 101/293 (34.47%), Postives = 149/293 (50.85%), Query Frame = 1 Query: 13 SNVASAIDVIIFVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGELPFFSVSEE---GEDTDSSKKXXXXXXXXXXXXRRPA---------VLADGTYATQSAASETAFS-----PPTIVQGTLTSGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVNKASSQALLIMVSMLQLGQSPVLPHPIDNDSFDRIVVCIRLLCNTGDNIRKIWLQSCRQSFVKMLSEKQLRESXELKGKAQ-ISHAQPDDLIDFYHLKS 837 +N +A DV+IF+RE I+ P LR II L++ F QI+++++ A+WI+GEY + S++ IA I+Q LGE+P + G+ T+ K+ V +DGTYATQSA S + PP LR L+ GDFF+GA ++ TLTKL LR E++ N+ ++Q +LIM S+L LG+S PI ND DRI VC+R L ++ CR++ KML + + LK K + + QPDD + F L + Sbjct: 409 TNELAAADVLIFIREAIQKFPALRALIIEHLIEAFPQIKSSKIHRAAVWILGEYVEG-SQILEVIAVIQQTLGEVPMVEAEQRRLAGDQTEEQKQQQGSAGGNAAGSAAEGSGSGNASNKVTSDGTYATQSAYSLAPVAKAEKRPP-----------LRQYLMDGDFFIGAALSATLTKLALRYAELETEARAQNRLTTQVMLIMSSILHLGKSGFPSKPITNDDTDRIFVCLRTLSERTPEAISVFTLYCREALGKMLDAQHDEDQRMLKEKQKATAKVQPDDPVLFAQLSN 689
BLAST of EY757122 vs. ExPASy Swiss-Prot
Match: COPB_RAT (Coatomer subunit beta OS=Rattus norvegicus GN=Copb1 PE=1 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 5.670e-35 Identity = 96/282 (34.04%), Postives = 154/282 (54.61%), Query Frame = 1 Query: 13 SNVASAIDVIIFVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGELPFFSVSEEGEDTDSSKKXXXXXXXXXXXXRRPAVLADGTYATQSAASETAFSPPTIVQGTLTSGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVNKASSQALLIMVSMLQLGQSPVLPHPIDNDSFDRIVVCIRLLCNTGDNIRKIWLQSCRQSFVKMLSEKQLRESXELKGKAQISH--AQPDDLIDFYHLKSRKGMS 852 SN A+A DV+ FVRE I+ LR+ I+ ++L+ F+ I++ ++ ALWI+GEYC + ++++ + +++ LGE+P SE ++ K + V GTYATQSA S S PT + LR LL GDFF+ A +A TLTK+ LR + + + N ++A+L+M ++L LG+S + PI +D DRI +C+++L + I+ + CRQS +MLS K E K +++ + QPDD I F L ++ M+ Sbjct: 412 SNEAAAADVLEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEVRRSLGEIPIVE-SEIKKEAGELKPEEEITVGPV----QKLVTEMGTYATQSALSS---SRPTKKEEDRPP--LRGFLLDGDFFVAASLATTLTKIALRYVALVQEKKKQNSFVAEAMLLMATILHLGKSSLPKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSQMLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAKNEMN 683
BLAST of EY757122 vs. ExPASy Swiss-Prot
Match: COPB_MOUSE (Coatomer subunit beta OS=Mus musculus GN=Copb1 PE=1 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 5.670e-35 Identity = 96/282 (34.04%), Postives = 154/282 (54.61%), Query Frame = 1 Query: 13 SNVASAIDVIIFVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGELPFFSVSEEGEDTDSSKKXXXXXXXXXXXXRRPAVLADGTYATQSAASETAFSPPTIVQGTLTSGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVNKASSQALLIMVSMLQLGQSPVLPHPIDNDSFDRIVVCIRLLCNTGDNIRKIWLQSCRQSFVKMLSEKQLRESXELKGKAQISH--AQPDDLIDFYHLKSRKGMS 852 SN A+A DV+ FVRE I+ LR+ I+ ++L+ F+ I++ ++ ALWI+GEYC + ++++ + +++ LGE+P SE ++ K + V GTYATQSA S S PT + LR LL GDFF+ A +A TLTK+ LR + + + N ++A+L+M ++L LG+S + PI +D DRI +C+++L + I+ + CRQS +MLS K E K +++ + QPDD I F L ++ M+ Sbjct: 412 SNEAAAADVLEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEVRRSLGEIPIVE-SEIKKEAGELKPEEEITVGPV----QKLVTEMGTYATQSALSS---SRPTKKEEDRPP--LRGFLLDGDFFVAASLATTLTKIALRYVALVQEKKKQNSFVAEAMLLMATILHLGKSSLPKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSQMLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAKNEMN 683
BLAST of EY757122 vs. ExPASy Swiss-Prot
Match: COPB_CHICK (Coatomer subunit beta OS=Gallus gallus GN=COPB1 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 7.405e-35 Identity = 97/285 (34.04%), Postives = 153/285 (53.68%), Query Frame = 1 Query: 13 SNVASAIDVIIFVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGELPFFSVSEEGEDTDSSKKXXXXXXXXXXXXRRPAVLADGTYATQSAASETAFSPPTIVQGTLTSGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVNKASSQALLIMVSMLQLGQSPVLPHPIDNDSFDRIVVCIRLLCNTGDNIRKIWLQSCRQSFVKMLSEKQLRESXELKGKAQISH--AQPDDLIDFYHLKSRKGMSQLE 861 +N A+A DV+ FVRE I+ LR I+ ++L+ F+ I++ ++ ALWI+GEYC + ++++ + +++ LGE+P SE ++ K + V GTYATQSA S S PT + LR LL GDFF+ A +A TLTK+ LR + + + N ++A+L+M ++L LG+S + PI +D DRI +C+++L + I+ + CRQS MLS K E K +++ + QPDD I F L ++ MS E Sbjct: 412 NNEAAAADVLEFVREAIQRFDNLRPLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEVRRSLGEIPIVE-SEIKKEAGELKPEEEVTVGPV----QKLVTEMGTYATQSALSS---SRPTKKEEDRPP--LRGFLLDGDFFVAASLATTLTKIALRYVSLVQEKKKQNSFIAEAMLLMATILHLGKSSLPKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSHMLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAKNEMSSKE 686
BLAST of EY757122 vs. ExPASy Swiss-Prot
Match: COPB_BOVIN (Coatomer subunit beta OS=Bos taurus GN=COPB1 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 9.671e-35 Identity = 96/282 (34.04%), Postives = 153/282 (54.26%), Query Frame = 1 Query: 13 SNVASAIDVIIFVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGELPFFSVSEEGEDTDSSKKXXXXXXXXXXXXRRPAVLADGTYATQSAASETAFSPPTIVQGTLTSGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVNKASSQALLIMVSMLQLGQSPVLPHPIDNDSFDRIVVCIRLLCNTGDNIRKIWLQSCRQSFVKMLSEKQLRESXELKGKAQISH--AQPDDLIDFYHLKSRKGMS 852 SN A+A DV+ FVRE I+ LR+ I+ ++L+ F+ I++ ++ ALWI+GEYC + ++++ + +++ LGE+P SE ++ K + V GTYATQSA S S PT + LR LL GDFF+ A +A TLTK+ LR + + + N ++A+L+M ++L LG+S + PI +D DRI +C+++L + I+ + CRQS MLS K E K +++ + QPDD I F L ++ M+ Sbjct: 412 SNEAAAADVLEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKDDIQSVMTEVRRSLGEIPIVE-SEIKKEAGELKPEEEITVGPV----QKLVTEMGTYATQSALSS---SRPTKKEEERPP--LRGFLLDGDFFVAASLATTLTKIALRYVALVQEKKKQNSFVAEAMLLMATILHLGKSSLPKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSHMLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAKNEMN 683
BLAST of EY757122 vs. ExPASy Swiss-Prot
Match: COPB_PONAB (Coatomer subunit beta OS=Pongo abelii GN=COPB1 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.650e-34 Identity = 96/282 (34.04%), Postives = 153/282 (54.26%), Query Frame = 1 Query: 13 SNVASAIDVIIFVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGELPFFSVSEEGEDTDSSKKXXXXXXXXXXXXRRPAVLADGTYATQSAASETAFSPPTIVQGTLTSGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVNKASSQALLIMVSMLQLGQSPVLPHPIDNDSFDRIVVCIRLLCNTGDNIRKIWLQSCRQSFVKMLSEKQLRESXELKGKAQISH--AQPDDLIDFYHLKSRKGMS 852 +N A+A DV+ FVRE I+ LR+ I+ ++L+ F+ I++ ++ ALWI+GEYC + ++++ + I++ LGE+P SE ++ K + V GTYATQSA S S PT + LR LL GDFF+ A +A TLTK+ LR + + + N ++A+L+M ++L LG+S + PI +D DRI +C+++L + I+ + CRQS MLS K E K +++ + QPDD I F L ++ M+ Sbjct: 412 NNEAAAADVLEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEIRRSLGEIPIVE-SEIKKEAGELKPEEEITVGPV----QKLVTEMGTYATQSALSS---SRPTKKEEDRPP--LRGFLLDGDFFVAASLATTLTKIALRYVALVQEKKKQNSFVAEAMLLMATILHLGKSSLPKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSHMLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAKNEMN 683 The following BLAST results are available for this feature:
BLAST of EY757122 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY757122 ID=EY757122; Name=EY757122; organism=Citrus sinensis; type=EST; length=897bpback to top |