EY757105

Overview
NameEY757105
Unique NameEY757105
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length502
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY757105_ssr472 microsatellite EY757105_ssr472:472..486. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig11471 contig Csv1_Contig11471:706..1207. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY757105 vs. ExPASy Swiss-Prot
Match: BAS1_ORYSJ (2-Cys peroxiredoxin BAS1, chloroplastic OS=Oryza sativa subsp. japonica GN=BAS1 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.312e-28
Identity = 59/63 (93.65%), Postives = 61/63 (96.83%), Query Frame = 1
Query:   19 GVIHHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAAI 207
            GVI HSTINNLAIGRSVDET+RTLQALQYVQ+NPDEVCPAGWKPGDKSMKPDPK SKEYFAAI
Sbjct:  199 GVIQHSTINNLAIGRSVDETMRTLQALQYVQDNPDEVCPAGWKPGDKSMKPDPKGSKEYFAAI 261          
BLAST of EY757105 vs. ExPASy Swiss-Prot
Match: BAS1B_ARATH (2-Cys peroxiredoxin BAS1-like, chloroplastic OS=Arabidopsis thaliana GN=At5g06290 PE=2 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 1.312e-28
Identity = 58/63 (92.06%), Postives = 61/63 (96.83%), Query Frame = 1
Query:   19 GVIHHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAAI 207
            GVI HSTINNL IGRSVDET+RTLQALQYVQENPDEVCPAGWKPG+KSMKPDPKLSKEYF+AI
Sbjct:  209 GVIQHSTINNLGIGRSVDETMRTLQALQYVQENPDEVCPAGWKPGEKSMKPDPKLSKEYFSAI 271          
BLAST of EY757105 vs. ExPASy Swiss-Prot
Match: BAS1A_ARATH (2-Cys peroxiredoxin BAS1, chloroplastic OS=Arabidopsis thaliana GN=BAS1 PE=1 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 1.713e-28
Identity = 57/63 (90.48%), Postives = 61/63 (96.83%), Query Frame = 1
Query:   19 GVIHHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAAI 207
            GVI HSTINNL IGRSVDET+RTLQALQY+QENPDEVCPAGWKPG+KSMKPDPKLSKEYF+AI
Sbjct:  204 GVIQHSTINNLGIGRSVDETMRTLQALQYIQENPDEVCPAGWKPGEKSMKPDPKLSKEYFSAI 266          
BLAST of EY757105 vs. ExPASy Swiss-Prot
Match: BAS1_SPIOL (2-Cys peroxiredoxin BAS1, chloroplastic OS=Spinacia oleracea GN=BAS1 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.316e-25
Identity = 55/63 (87.30%), Postives = 58/63 (92.06%), Query Frame = 1
Query:   19 GVIHHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAAI 207
            GVI HSTINNL IGRSVDET+RTLQALQY   NPDEVCPAGWKPG+KSMKPDPKLSKEYF+AI
Sbjct:  204 GVIQHSTINNLGIGRSVDETMRTLQALQYTG-NPDEVCPAGWKPGEKSMKPDPKLSKEYFSAI 265          
BLAST of EY757105 vs. ExPASy Swiss-Prot
Match: BAS1_HORVU (2-Cys peroxiredoxin BAS1, chloroplastic (Fragment) OS=Hordeum vulgare GN=BAS1 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.024e-25
Identity = 56/63 (88.89%), Postives = 59/63 (93.65%), Query Frame = 1
Query:   19 GVIHHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAAI 207
            GVI HSTINNL IGRSVDETLRTLQALQYV++ PDEVCPAGWKPG+KSMKPDPK SKEYFAAI
Sbjct:  149 GVIQHSTINNLGIGRSVDETLRTLQALQYVKK-PDEVCPAGWKPGEKSMKPDPKGSKEYFAAI 210          
BLAST of EY757105 vs. ExPASy Swiss-Prot
Match: BAS1_WHEAT (2-Cys peroxiredoxin BAS1, chloroplastic (Fragment) OS=Triticum aestivum GN=TSA PE=1 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 8.799e-25
Identity = 55/63 (87.30%), Postives = 59/63 (93.65%), Query Frame = 1
Query:   19 GVIHHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAAI 207
            GVI HSTINNL IGRSVDETLRTL+ALQYV++ PDEVCPAGWKPG+KSMKPDPK SKEYFAAI
Sbjct:  149 GVIQHSTINNLGIGRSVDETLRTLRALQYVKK-PDEVCPAGWKPGEKSMKPDPKGSKEYFAAI 210          
BLAST of EY757105 vs. ExPASy Swiss-Prot
Match: YCF42_PORYE (Putative peroxiredoxin ycf42 OS=Porphyra yezoensis GN=ycf42 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.553e-21
Identity = 46/62 (74.19%), Postives = 52/62 (83.87%), Query Frame = 1
Query:   19 GVIHHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAA 204
            G+I +STINNL  GRSV+ETLR LQA+QYVQ +PDEVCPA WKPGDK+M PDP  SK YFAA
Sbjct:  137 GIIQYSTINNLEFGRSVEETLRVLQAIQYVQSHPDEVCPANWKPGDKTMNPDPIKSKNYFAA 198          
BLAST of EY757105 vs. ExPASy Swiss-Prot
Match: YCF42_PORPU (Putative peroxiredoxin ycf42 OS=Porphyra purpurea GN=ycf42 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 5.902e-21
Identity = 44/62 (70.97%), Postives = 52/62 (83.87%), Query Frame = 1
Query:   19 GVIHHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAA 204
            G+I +ST+NNL  GRSV+ETLR LQA+QYVQ +PDEVCPA WKPGD++M PDP  SK YFAA
Sbjct:  137 GIIQYSTVNNLEFGRSVEETLRVLQAIQYVQAHPDEVCPANWKPGDRTMNPDPIKSKNYFAA 198          
BLAST of EY757105 vs. ExPASy Swiss-Prot
Match: Y755_SYNY3 (Putative peroxiredoxin sll0755 OS=Synechocystis sp. (strain PCC 6803) GN=sll0755 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.504e-16
Identity = 35/65 (53.85%), Postives = 52/65 (80.00%), Query Frame = 1
Query:   19 GVIHHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAAI*E 213
            G++ ++T+NNL+ GRSVDETLR L+A+++VQ +P+EVCP  W+ GDK+M PDP+ +K YF  + E
Sbjct:  135 GILQYATVNNLSFGRSVDETLRVLKAIRHVQSHPNEVCPVDWQEGDKTMIPDPEKAKTYFETVAE 199          
BLAST of EY757105 vs. ExPASy Swiss-Prot
Match: PRDX1_CHICK (Peroxiredoxin-1 OS=Gallus gallus GN=PRDX1 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 4.097e-14
Identity = 35/61 (57.38%), Postives = 47/61 (77.05%), Query Frame = 1
Query:   19 GVIHHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFA 201
            G++   TIN+L +GRSVDETLR +QA Q+  ++  EVCPAGWKPG  ++KPD + SKEYF+
Sbjct:  137 GILRQITINDLPVGRSVDETLRLVQAFQFTDKH-GEVCPAGWKPGSDTIKPDVQKSKEYFS 196          
The following BLAST results are available for this feature:
BLAST of EY757105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
BAS1_ORYSJ1.312e-2893.652-Cys peroxiredoxin BAS1, chloroplastic OS=Oryza s... [more]
BAS1B_ARATH1.312e-2892.062-Cys peroxiredoxin BAS1-like, chloroplastic OS=Ar... [more]
BAS1A_ARATH1.713e-2890.482-Cys peroxiredoxin BAS1, chloroplastic OS=Arabido... [more]
BAS1_SPIOL2.316e-2587.302-Cys peroxiredoxin BAS1, chloroplastic OS=Spinaci... [more]
BAS1_HORVU3.024e-2588.892-Cys peroxiredoxin BAS1, chloroplastic (Fragment)... [more]
BAS1_WHEAT8.799e-2587.302-Cys peroxiredoxin BAS1, chloroplastic (Fragment)... [more]
YCF42_PORYE1.553e-2174.19Putative peroxiredoxin ycf42 OS=Porphyra yezoensis... [more]
YCF42_PORPU5.902e-2170.97Putative peroxiredoxin ycf42 OS=Porphyra purpurea ... [more]
Y755_SYNY31.504e-1653.85Putative peroxiredoxin sll0755 OS=Synechocystis sp... [more]
PRDX1_CHICK4.097e-1457.38Peroxiredoxin-1 OS=Gallus gallus GN=PRDX1 PE=1 SV=... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-017-D11-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757105 ID=EY757105; Name=EY757105; organism=Citrus sinensis; type=EST; length=502bp
TGCCCGACCCACGCGTCCGGAGTCATCCATCACTCAACCATTAACAACCT
TGCCATTGGTAGGAGTGTTGACGAGACACTGAGAACACTTCAGGCCTTGC
AGTACGTGCAGGAGAACCCAGATGAAGTTTGCCCAGCAGGATGGAAGCCC
GGGGACAAATCCATGAAGCCAGACCCAAAACTCAGCAAGGAGTACTTTGC
GGCTATATAAGAGGGGTTAGCATTGGAACCTCGTATGCATATCTATGTCT
ATTAGGGAGGTGTAGATGAGTTTTGTTTTTACATGTAATGTGATTTTACT
ACTTACTGTGAGTTCTGCGGAGCAGCCTATGGGGAATAAATGCATTGGAC
TGGATTTGTCCATCTCTTTTCTTCCTTTGTAATGCAGACACAACAAACAA
TCTCTGGTTATTGTCCTCTTCATATTATCAATGTTCTGTGAATCATATTT
TGGCCAATTGGATGCAAAAATAAATAAAATAAAATAAAAAGAAAAAAAAA
AG
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