EY757098

Overview
NameEY757098
Unique NameEY757098
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length497
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10075 contig Csv1_Contig10075:708..1194. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY757098 vs. ExPASy Swiss-Prot
Match: UCRI_MAIZE (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Zea mays PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 2.823e-28
Identity = 52/56 (92.86%), Postives = 55/56 (98.21%), Query Frame = 3
Query:   18 HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLLIG 185
            HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVP Y+FL+ENKLL+G
Sbjct:  218 HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPTYSFLEENKLLVG 273          
BLAST of EY757098 vs. ExPASy Swiss-Prot
Match: UCRI_SOLTU (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Solanum tuberosum GN=FES1 PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 4.816e-28
Identity = 52/56 (92.86%), Postives = 55/56 (98.21%), Query Frame = 3
Query:   18 HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLLIG 185
            HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAP+NLEVP Y+FL+ENKLLIG
Sbjct:  210 HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 265          
BLAST of EY757098 vs. ExPASy Swiss-Prot
Match: UCRI4_TOBAC (Cytochrome b-c1 complex subunit Rieske-4, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 4.816e-28
Identity = 52/56 (92.86%), Postives = 55/56 (98.21%), Query Frame = 3
Query:   18 HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLLIG 185
            HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAP+NLEVP Y+FL+ENKLLIG
Sbjct:  181 HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 236          
BLAST of EY757098 vs. ExPASy Swiss-Prot
Match: UCRI2_TOBAC (Cytochrome b-c1 complex subunit Rieske-2, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 4.816e-28
Identity = 52/56 (92.86%), Postives = 55/56 (98.21%), Query Frame = 3
Query:   18 HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLLIG 185
            HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAP+NLEVP Y+FL+ENKLLIG
Sbjct:  217 HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 272          
BLAST of EY757098 vs. ExPASy Swiss-Prot
Match: UCRI1_TOBAC (Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment) OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 4.816e-28
Identity = 52/56 (92.86%), Postives = 55/56 (98.21%), Query Frame = 3
Query:   18 HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLLIG 185
            HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAP+NLEVP Y+FL+ENKLLIG
Sbjct:  203 HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 258          
BLAST of EY757098 vs. ExPASy Swiss-Prot
Match: UCRI5_TOBAC (Cytochrome b-c1 complex subunit Rieske-5, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 8.215e-28
Identity = 51/56 (91.07%), Postives = 55/56 (98.21%), Query Frame = 3
Query:   18 HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLLIG 185
            HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAP+NLEVP Y+F++ENKLLIG
Sbjct:  213 HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFMEENKLLIG 268          
BLAST of EY757098 vs. ExPASy Swiss-Prot
Match: UCRI3_TOBAC (Cytochrome b-c1 complex subunit Rieske-3, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 8.215e-28
Identity = 51/56 (91.07%), Postives = 55/56 (98.21%), Query Frame = 3
Query:   18 HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLLIG 185
            HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAP+NLEVP Y+F++ENKLLIG
Sbjct:  213 HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFMEENKLLIG 268          
BLAST of EY757098 vs. ExPASy Swiss-Prot
Match: UCRI_NEUCR (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Neurospora crassa GN=NCU06606 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.603e-23
Identity = 43/56 (76.79%), Postives = 50/56 (89.29%), Query Frame = 3
Query:   18 HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLLIG 185
            HLGC+P+  AGD+GGWFCPCHGSHYDISGRIRKGPAP NLE+P+Y F +E KL+IG
Sbjct:  176 HLGCVPIGEAGDYGGWFCPCHGSHYDISGRIRKGPAPLNLEIPLYEFPEEGKLVIG 231          
BLAST of EY757098 vs. ExPASy Swiss-Prot
Match: UCRI_YEAST (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Saccharomyces cerevisiae GN=RIP1 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 6.736e-22
Identity = 42/56 (75.00%), Postives = 49/56 (87.50%), Query Frame = 3
Query:   18 HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLLIG 185
            HLGC+P+  AGDFGGWFCPCHGSHYDISGRIRKGPAP NLE+P Y F D +K+++G
Sbjct:  161 HLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPAYEF-DGDKVIVG 215          
BLAST of EY757098 vs. ExPASy Swiss-Prot
Match: UCRI_SAISC (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Saimiri sciureus GN=UQCRFS1 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.149e-21
Identity = 40/56 (71.43%), Postives = 49/56 (87.50%), Query Frame = 3
Query:   18 HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLLIG 185
            HLGC+P+ NAGDFGG++CPCHGSHYD SGRIRKGPAP NLEVP Y FL ++ +++G
Sbjct:  219 HLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPTYEFLSDDMVVVG 274          
The following BLAST results are available for this feature:
BLAST of EY757098 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
UCRI_MAIZE2.823e-2892.86Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI_SOLTU4.816e-2892.86Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI4_TOBAC4.816e-2892.86Cytochrome b-c1 complex subunit Rieske-4, mitochon... [more]
UCRI2_TOBAC4.816e-2892.86Cytochrome b-c1 complex subunit Rieske-2, mitochon... [more]
UCRI1_TOBAC4.816e-2892.86Cytochrome b-c1 complex subunit Rieske-1, mitochon... [more]
UCRI5_TOBAC8.215e-2891.07Cytochrome b-c1 complex subunit Rieske-5, mitochon... [more]
UCRI3_TOBAC8.215e-2891.07Cytochrome b-c1 complex subunit Rieske-3, mitochon... [more]
UCRI_NEUCR1.603e-2376.79Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI_YEAST6.736e-2275.00Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI_SAISC1.149e-2171.43Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-017-D02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757098 ID=EY757098; Name=EY757098; organism=Citrus sinensis; type=EST; length=497bp
TCCGACCCACGCGTCCGCATTTGGGGTGCATTCCTTTACCAAATGCTGGT
GACTTTGGAGGTTGGTTCTGCCCCTGCCATGGTTCGCACTATGACATATC
TGGCAGGATCCGCAAGGGGCCAGCACCATTCAATCTAGAGGTACCCATGT
ACAATTTCTTGGACGAGAACAAGTTACTGATTGGGTGATCATTGATAGTG
GATATCTTTTTGGAGCAGTTCCTTTTGAATGAGTGTTGTAATAGTTTCCT
TTTTTTTTTTTTTATTTTTTTTATTTTCCCCCTCTCTTCCACCAAAGGAA
AATTTGATTCCACAAATTGATTTTGTTTTGCTTTAAGCTATTCAGCTATG
CTTTACATATAAAGCAATTCTGAAGTTGAGAATAATGCAACTGGAAATTT
GTTGAGCACTTTCACCTTGAATGGTTCTTAAATTTTGTTAAATAATCTAA
GTTTATGAAAAAAAAAAAAAAAAAGAACAAAAAACTTAAAGGAAAAA
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