EY757045

Overview
NameEY757045
Unique NameEY757045
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length746
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757045 vs. ExPASy Swiss-Prot
Match: PSF3_PHANO (DNA replication complex GINS protein PSF3 OS=Phaeosphaeria nodorum GN=PSF3 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.920e-12
Identity = 41/132 (31.06%), Postives = 69/132 (52.27%), Query Frame = 3
Query:   45 EGAKVELPFWLSQELYLRQA------VSINVPACFNQKTRREIQADAANVDLRSRCPYFYEFGCKIAPIVGDRTIGKMLLSTFQMRYKDILTKAHT--AAYAVASKFLAVLTKEETNLYEAAQSSMAAFKKW 416
            +G+KVELP WL + L L Q+      V+++ P+  + +    ++AD   VDLR+  P+FY+ G +I  +  +  + ++L  TF+ R   I  +AH    A    + F+  L + E  L+ AA  S  A + W
Sbjct:   41 QGSKVELPLWLGEMLALSQSLNTSSLVTLDPPSALSPRVLNALKADPRTVDLRALAPHFYDLGARILELFEEEKMIEVLSDTFKARAAVIADQAHNPRGALGEGADFMRGLDENERQLFRAAHDSAKAARTW 172          
BLAST of EY757045 vs. ExPASy Swiss-Prot
Match: PSF3_BOVIN (DNA replication complex GINS protein PSF3 OS=Bos taurus GN=GINS3 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.228e-11
Identity = 45/143 (31.47%), Postives = 70/143 (48.95%), Query Frame = 3
Query:   12 RVRSAEKD-CVDEGAKVELPFWLSQELY--LRQAVSINVPACFNQKTRREIQADAANVDLRSRCPYFYEFGCKIAPIVG--DRTIGKMLLSTFQMRYKDILTKAHTAAYAVASKFLAVLTKEETNLYEAAQSSMAAFKKWRIG 425
            R   AE D  + EG K+ELP WL++ L+   R+ +S+ +P  + +  R    ADA  VDL    P+FY FG ++       +  I   LL TF  R++ I+  +  A     S  +A L + E  L++  Q  +  F+ W  G
Sbjct:   50 RSGGAETDNAIPEGTKLELPLWLAKGLFDNKRRILSVELPKIYQEGWRTVFSADANVVDLHKMGPHFYGFGSQLLHFDSPENADISHSLLQTFVGRFRRIMDSSQNAYNEDTSALVARLDEMERGLFQTGQKGLNDFQCWEKG 192          
BLAST of EY757045 vs. ExPASy Swiss-Prot
Match: PSF3_PONAB (DNA replication complex GINS protein PSF3 OS=Pongo abelii GN=GINS3 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.392e-11
Identity = 44/143 (30.77%), Postives = 72/143 (50.35%), Query Frame = 3
Query:   12 RVRSAEKD-CVDEGAKVELPFWLSQELY--LRQAVSINVPACFNQKTRREIQADAANVDLRSRCPYFYEFGCKIAPIVG--DRTIGKMLLSTFQMRYKDILTKAHTAAYAVASKFLAVLTKEETNLYEAAQSSMAAFKKWRIG 425
            R   AE D  V +G+K+ELP WL++ L+   R+ +S+ +P  + +  R    AD   VDL    P+FY FG ++       +  I + LL TF  R++ I+  +  A     S  +A L + E  L++  Q+ +  F+ W  G
Sbjct:   50 RSAGAETDNAVPQGSKLELPLWLAKGLFDNKRRILSVELPKIYQEGWRTVFSADPNVVDLHKMGPHFYGFGSQLLHFDSPENADISQSLLQTFIGRFRRIMDSSQNAYNEDTSALVARLDEMERGLFQIGQNGLNDFQCWEKG 192          
BLAST of EY757045 vs. ExPASy Swiss-Prot
Match: PSF3_MOUSE (DNA replication complex GINS protein PSF3 OS=Mus musculus GN=Gins3 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.392e-11
Identity = 40/131 (30.53%), Postives = 67/131 (51.15%), Query Frame = 3
Query:   45 EGAKVELPFWLSQELY--LRQAVSINVPACFNQKTRREIQADAANVDLRSRCPYFYEFGCKIAPIVG--DRTIGKMLLSTFQMRYKDILTKAHTAAYAVASKFLAVLTKEETNLYEAAQSSMAAFKKWRIG 425
            +G K+ELP WL++ L+   R+ +S+ +P  + +  R    ADA  VDL    P+FY FG ++       +  I + LL TF  R++ I+  +  +     S  +A L + E  L++  Q S+  F+ W  G
Sbjct:   62 QGTKLELPLWLAKGLFDHKRRILSVELPKMYQEGWRTVFSADANVVDLHKMGPHFYGFGSQLLHFDSPENADISQSLLKTFIGRFRRIMDSSQNSYNEDTSALVARLDETERGLFQIGQRSLNDFQSWEKG 192          
BLAST of EY757045 vs. ExPASy Swiss-Prot
Match: PSF3_HUMAN (DNA replication complex GINS protein PSF3 OS=Homo sapiens GN=GINS3 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.392e-11
Identity = 44/143 (30.77%), Postives = 71/143 (49.65%), Query Frame = 3
Query:   12 RVRSAEKD-CVDEGAKVELPFWLSQELY--LRQAVSINVPACFNQKTRREIQADAANVDLRSRCPYFYEFGCKIAPIVG--DRTIGKMLLSTFQMRYKDILTKAHTAAYAVASKFLAVLTKEETNLYEAAQSSMAAFKKWRIG 425
            R   AE D  V +G+K+ELP WL++ L+   R+ +S+ +P  + +  R    AD   VDL    P+FY FG ++       +  I + LL TF  R++ I+  +  A     S  +A L + E  L++  Q  +  F+ W  G
Sbjct:   50 RSAGAETDNAVPQGSKLELPLWLAKGLFDNKRRILSVELPKIYQEGWRTVFSADPNVVDLHKMGPHFYGFGSQLLHFDSPENADISQSLLQTFIGRFRRIMDSSQNAYNEDTSALVARLDEMERGLFQTGQKGLNDFQCWEKG 192          
The following BLAST results are available for this feature:
BLAST of EY757045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PSF3_PHANO2.920e-1231.06DNA replication complex GINS protein PSF3 OS=Phaeo... [more]
PSF3_BOVIN3.228e-1131.47DNA replication complex GINS protein PSF3 OS=Bos t... [more]
PSF3_PONAB9.392e-1130.77DNA replication complex GINS protein PSF3 OS=Pongo... [more]
PSF3_MOUSE9.392e-1130.53DNA replication complex GINS protein PSF3 OS=Mus m... [more]
PSF3_HUMAN9.392e-1130.77DNA replication complex GINS protein PSF3 OS=Homo ... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-016-G02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757045 ID=EY757045; Name=EY757045; organism=Citrus sinensis; type=EST; length=746bp
TTCTCGACCCACGCGTCCGCAGTGCTGAAAAAGACTGTGTTGATGAAGGT
GCAAAAGTAGAGCTTCCCTTCTGGCTTTCTCAGGAGTTATATTTGAGGCA
AGCTGTATCAATAAATGTTCCAGCTTGCTTCAATCAAAAAACAAGACGGG
AAATCCAGGCTGATGCTGCAAATGTGGATCTAAGATCTCGGTGTCCATAT
TTCTATGAATTTGGATGTAAGATAGCACCAATAGTTGGTGATCGCACCAT
TGGGAAGATGCTCTTGTCGACATTTCAGATGAGGTATAAGGACATCTTGA
CCAAGGCACACACTGCAGCATATGCAGTGGCTTCCAAATTCTTAGCAGTG
TTAACGAAAGAAGAAACTAACTTGTATGAGGCAGCTCAATCCTCCATGGC
AGCCTTCAAGAAGTGGCGGATTGGCGGTCCCAGAATTCAGAGGGCTTCAG
TTCTCGGAAGGAAGAGGAAGCCAATCGACTAGGCACTTTTTCCTAACCCA
ATTATAATATCCATCCAATAAATCGAGTTCATTCTCGCCATCTTGAGCTT
TGTAAGTGTATGAAATTGGCCCCAAATGATTTCATAAATGCCTGATGTAG
CGTAGCGGCTAGCTCCTGATATAAAATTAAGAGTTCTAGGNTTTCCTTAC
CTGNTTAATTTATAACAAATTAACAATTAGCTGATAAGNTGTAAAGTAAA
TAATTATATAAAAACGAAATACCAATTTACTTTGTGGGGNANAAAA
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