EY757044

Overview
NameEY757044
Unique NameEY757044
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length572
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig415 contig Csv1_Contig415:231..798. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY757044 vs. ExPASy Swiss-Prot
Match: Y4844_ARATH (Uncharacterized protein At4g28440 OS=Arabidopsis thaliana GN=At4g28440 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 4.804e-26
Identity = 57/82 (69.51%), Postives = 65/82 (79.27%), Query Frame = 3 
Query:    3 TRP-----QPSRPPRIAECLVGDDTGAIYFTARNDQVDIMTPGTTVILRNAKIDMFKGSMRLAVDKWGRIEVTEPADFEVKE 233
            TRP     +PS+P RI ECL+GD+TG I FTARNDQVD+M PG TVILRN++IDMFKG+MRL VDKWGRIE T  A F VKE
Sbjct:   54 TRPASSLSRPSQPSRIVECLIGDETGCILFTARNDQVDLMKPGATVILRNSRIDMFKGTMRLGVDKWGRIEATGAASFTVKE 135
The following BLAST results are available for this feature:
BLAST of EY757044 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4844_ARATH4.804e-2669.51Uncharacterized protein At4g28440 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-016-F12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757044 ID=EY757044; Name=EY757044; organism=Citrus sinensis; type=EST; length=572bp
CCACGCGTCCGCAGCCTTCTCGACCACCTCGCATCGCCGAGTGCCTCGTC
GGCGACGACACCGGTGCCATCTACTTCACTGCCCGCAACGACCAAGTTGA
TATTATGACGCCGGGCACCACTGTGATTCTACGTAATGCTAAGATTGATA
TGTTCAAGGGCTCAATGAGGCTAGCAGTCGACAAATGGGGACGCATTGAA
GTCACCGAACCTGCTGACTTTGAAGTTAAAGAGAGTAACAATCTTTCTTT
AGTTGAGTATGAGTTAGTTAATGTGGAGTGATTGGTATCATTTGGAGGTG
AATATTTGTAGGTTAGTATTTCTGGAGGTTCGATTCTTCTTGTTCCCCGT
CAAAACTGTTAACTGGGATCCAGTTTTTATGGATGGTGGTACAAAGATCT
TGCTTATATGGTTTTTTCCAGCTTTGATATCAATGTGATGATAGACACAA
GTAATTAAGTTTCTGATTGAGTTTGAAATGGATCAGTTAATGTTATATTT
TAATTAANNAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAGG
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