EY757034

Overview
NameEY757034
Unique NameEY757034
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY757034_ssr669 microsatellite EY757034_ssr669:669..698. BLAST: Citrus ESTs to Prunus persica proteins V1
EY757034_ssr422 microsatellite EY757034_ssr422:422..433. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY757034 vs. ExPASy Swiss-Prot
Match: NFYB2_ARATH (Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana GN=NFYB2 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 3.573e-49
Identity = 95/112 (84.82%), Postives = 101/112 (90.18%), Query Frame = 3
Query:   18 GGERERQHGSSRELSPREQDRFLPIANVSRIMKKALPANAKISKDAKEIVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEGEK 353
            GG+          LSPREQDRFLPIANVSRIMKKALPANAKISKDAKE +QECVSEFISFVTGEASDKCQ+EKRKTINGDDLLWAMTTLGFE+YVEPLKVYLQRFRE+EGE+
Sbjct:   10 GGQNGNNQNGQSSLSPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQECVSEFISFVTGEASDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGER 121          
BLAST of EY757034 vs. ExPASy Swiss-Prot
Match: NFYB3_ARATH (Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana GN=NFYB3 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 4.368e-47
Identity = 92/105 (87.62%), Postives = 97/105 (92.38%), Query Frame = 3
Query:   39 HGSSRELSPREQDRFLPIANVSRIMKKALPANAKISKDAKEIVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEGEK 353
            H      S REQDRFLPIANVSRIMKKALPANAKISKDAKE VQECVSEFISF+TGEASDKCQREKRKTINGDDLLWAMTTLGFE+YVEPLKVYLQ++RE+EGEK
Sbjct:   11 HKDGGNASTREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEGEK 115          
BLAST of EY757034 vs. ExPASy Swiss-Prot
Match: NFYB8_ARATH (Nuclear transcription factor Y subunit B-8 OS=Arabidopsis thaliana GN=NFYB8 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 5.340e-45
Identity = 91/122 (74.59%), Postives = 100/122 (81.97%), Query Frame = 3
Query:   15 SGGERERQHGSSRELSPREQDRFLPIANVSRIMKKALPANAKISKDAKEIVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEGEKMARDKDAPP 380
            SGG++     S R L  REQDRFLPIAN+SRIMK+ LPAN KI+KDAKEIVQECVSEFISFVT EASDKCQREKRKTINGDDLLWAM TLGFE+Y+EPLKVYL R+REMEG+     K   P
Sbjct:   17 SGGDQ-----SPRSLHVREQDRFLPIANISRIMKRGLPANGKIAKDAKEIVQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYMEPLKVYLMRYREMEGDTKGSAKGGDP 133          
BLAST of EY757034 vs. ExPASy Swiss-Prot
Match: NFYB_MAIZE (Nuclear transcription factor Y subunit B OS=Zea mays GN=NFY2 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 5.904e-44
Identity = 89/123 (72.36%), Postives = 100/123 (81.30%), Query Frame = 3
Query:   18 GGERERQHGSSREL----SPREQDRFLPIANVSRIMKKALPANAKISKDAKEIVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEGEKMARDKDA 374
            GG    + GS R      S REQDRFLPIAN+SRIMKKA+PAN KI+KDAKE VQECVSEFISF+T EASDKCQREKRKTINGDDLLWAM TLGFE+Y+EPLKVYLQ++REMEG+     K +
Sbjct:   10 GGGGSHESGSPRGGGGGGSVREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKVYLQKYREMEGDSKLTAKSS 132          
BLAST of EY757034 vs. ExPASy Swiss-Prot
Match: NFYB3_ORYSJ (Nuclear transcription factor Y subunit B-3 OS=Oryza sativa subsp. japonica GN=NFYB3 PE=1 SV=2)

HSP 1 Score: 176.022 bits (445), Expect = 2.243e-43
Identity = 82/95 (86.32%), Postives = 91/95 (95.79%), Query Frame = 3
Query:   66 REQDRFLPIANVSRIMKKALPANAKISKDAKEIVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEGE 350
            REQDRFLPIAN+SRIMKKA+PAN KI+KDAKE VQECVSEFISF+T EASDKCQREKRKTINGDDLLWAM TLGFE+Y+EPLKVYLQ++REMEG+
Sbjct:   37 REQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKVYLQKYREMEGD 131          
BLAST of EY757034 vs. ExPASy Swiss-Prot
Match: NFYBA_ARATH (Nuclear transcription factor Y subunit B-10 OS=Arabidopsis thaliana GN=NFYB10 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.827e-43
Identity = 86/118 (72.88%), Postives = 98/118 (83.05%), Query Frame = 3
Query:   15 SGGERERQHGSSRELSPREQDRFLPIANVSRIMKKALPANAKISKDAKEIVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEGEKMARDK 368
            SGG++     S R L+ REQDRFLPIAN+SRIMK+ LP N KI+KDAKE +QECVSEFISFVT EASDKCQREKRKTINGDDLLWAM TLGFE+Y++PLKVYL R+REMEG+     K
Sbjct:   16 SGGDQ-----SPRSLNVREQDRFLPIANISRIMKRGLPLNGKIAKDAKETMQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLMRYREMEGDTKGSGK 128          
BLAST of EY757034 vs. ExPASy Swiss-Prot
Match: NFYB7_ARATH (Nuclear transcription factor Y subunit B-7 OS=Arabidopsis thaliana GN=NFYB7 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.100e-41
Identity = 81/101 (80.20%), Postives = 90/101 (89.11%), Query Frame = 3
Query:   66 REQDRFLPIANVSRIMKKALPANAKISKDAKEIVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEGEKMARDK 368
            +EQDRFLPIANV RIMKK LP N KISKDAKE VQECVSEFISFVTGEASDKCQREKRKTINGDD++WA+TTLGFE+YV PLKVYL ++R+ EGEK+   K
Sbjct:   35 KEQDRFLPIANVGRIMKKVLPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDIIWAITTLGFEDYVAPLKVYLCKYRDTEGEKVNSPK 135          
BLAST of EY757034 vs. ExPASy Swiss-Prot
Match: NFYB1_ARATH (Nuclear transcription factor Y subunit B-1 OS=Arabidopsis thaliana GN=NFYB1 PE=1 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 3.582e-41
Identity = 78/103 (75.73%), Postives = 90/103 (87.38%), Query Frame = 3
Query:   60 SPREQDRFLPIANVSRIMKKALPANAKISKDAKEIVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEGEKMARDK 368
            S REQDR+LPIAN+SRIMKKALP N KI KDAK+ VQECVSEFISF+T EASDKCQ+EKRKT+NGDDLLWAM TLGFE+Y+EPLK+YL R+RE+EG+     K
Sbjct:   18 SVREQDRYLPIANISRIMKKALPPNGKIGKDAKDTVQECVSEFISFITSEASDKCQKEKRKTVNGDDLLWAMATLGFEDYLEPLKIYLARYRELEGDNKGSGK 120          
BLAST of EY757034 vs. ExPASy Swiss-Prot
Match: NFYB2_ORYSJ (Nuclear transcription factor Y subunit B-2 OS=Oryza sativa subsp. japonica GN=NFYB2 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.352e-39
Identity = 82/125 (65.60%), Postives = 96/125 (76.80%), Query Frame = 3
Query:   12 ISGGERERQHGSSRELSP------REQDRFLPIANVSRIMKKALPANAKISKDAKEIVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEGEKMARDK 368
            + GG      G     SP      REQDRFLPIAN+SRIMKKA+PAN KI+KDAKE +QECVSEFISFVT EASDKCQ+EKRKTING+DLL+AM TLGFEEYV+PLK+YL ++RE+ G+     K
Sbjct:    9 LEGGAGMADAGHDESGSPPRSGGVREQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVSEFISFVTSEASDKCQKEKRKTINGEDLLFAMGTLGFEEYVDPLKIYLHKYREVIGDSKLSSK 133          
BLAST of EY757034 vs. ExPASy Swiss-Prot
Match: NFYB4_ORYSJ (Nuclear transcription factor Y subunit B-4 OS=Oryza sativa subsp. japonica GN=NFYB4 PE=2 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 4.098e-37
Identity = 73/105 (69.52%), Postives = 91/105 (86.67%), Query Frame = 3
Query:   66 REQDRFLPIANVSRIMKKALPANAKISKDAKEIVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEGE-KMARDKDAP 377
            +EQDRFLPIAN+ RIM++A+P N KI+KD+KE VQECVSEFISF+T EASDKC +EKRKTINGDDL+W+M TLGFE+YVEPLK+YL+ +RE EG+ K +R  + P
Sbjct:   21 KEQDRFLPIANIGRIMRRAVPENGKIAKDSKESVQECVSEFISFITSEASDKCLKEKRKTINGDDLIWSMGTLGFEDYVEPLKLYLRLYRETEGDTKGSRASELP 125          
The following BLAST results are available for this feature:
BLAST of EY757034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
NFYB2_ARATH3.573e-4984.82Nuclear transcription factor Y subunit B-2 OS=Arab... [more]
NFYB3_ARATH4.368e-4787.62Nuclear transcription factor Y subunit B-3 OS=Arab... [more]
NFYB8_ARATH5.340e-4574.59Nuclear transcription factor Y subunit B-8 OS=Arab... [more]
NFYB_MAIZE5.904e-4472.36Nuclear transcription factor Y subunit B OS=Zea ma... [more]
NFYB3_ORYSJ2.243e-4386.32Nuclear transcription factor Y subunit B-3 OS=Oryz... [more]
NFYBA_ARATH3.827e-4372.88Nuclear transcription factor Y subunit B-10 OS=Ara... [more]
NFYB7_ARATH2.100e-4180.20Nuclear transcription factor Y subunit B-7 OS=Arab... [more]
NFYB1_ARATH3.582e-4175.73Nuclear transcription factor Y subunit B-1 OS=Arab... [more]
NFYB2_ORYSJ3.352e-3965.60Nuclear transcription factor Y subunit B-2 OS=Oryz... [more]
NFYB4_ORYSJ4.098e-3769.52Nuclear transcription factor Y subunit B-4 OS=Oryz... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-016-E12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757034 ID=EY757034; Name=EY757034; organism=Citrus sinensis; type=EST; length=832bp
CTCGGATAATGATCTCGGGAGGTGAAAGAGAGAGGCAGCACGGCTCATCC
AGGGAGCTGTCGCCGAGGGAGCAGGACAGGTTCCTGCCGATAGCAAACGT
GAGCAGGATCATGAAAAAGGCCCTGCCCGCGAATGCCAAGATATCCAAGG
ATGCCAAGGAGATCGTGCAAGAGTGCGTCTCCGAGTTCATTAGCTTCGTC
ACCGGCGAGGCCTCCGATAAGTGCCAAAGGGAGAAGCGAAAGACCATCAA
TGGAGACGATCTCCTGTGGGCAATGACCACTCTGGGCTTCGAGGAATACG
TGGAGCCGCTCAAGGTTTACCTGCAGAGGTTCAGGGAGATGGAAGGGGAG
AAAATGGCGCGTGACAAGGACGCGCCGCCGGGTCACGGTGTTGGCGGTGC
GATTGGCGGAGAGTACGGTGGGATGATGATGATGGGACACGGAGGTCAAC
TCAATCAAGGGAACGTGTATGGCTCTGGTGGGTTTCATCATCAAATGGCT
ATGAGTAGCAAGGGTGGGCCTACCAGTGGTGGTAGCTTAGGTAGGCCCAG
ATAGTGGAAAAAGAGTCTGGAGGTGTGATCTCTGATGACGGGGAAACGCG
TACGGTGTAGATCCGTGGGAACATGTGATTGGATCTCTGGTGCTTAGTTT
ACCAGCTTATTTGTTTTGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAT
ATATCTCCATGTGATTAACTTTCAGTCTGTGTGTAGGTTTAAGACTTTCT
TGAATGCAATATTAGGGNGTTATAACAAAGGAAAAAATTTGCTTGAAAAA
ACNCNANCATCNTCCCCCCCTTCTTAATAAGG
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