EY756985

Overview
NameEY756985
Unique NameEY756985
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756985 vs. ExPASy Swiss-Prot
Match: NUD27_ARATH (Nudix hydrolase 27, chloroplastic OS=Arabidopsis thaliana GN=NUDT27 PE=1 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 2.562e-69
Identity = 123/167 (73.65%), Postives = 141/167 (84.43%), Query Frame = 2
Query:  197 ALSTETPPDGYRRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPLKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWKWMFPEQVLERAVDFKKPVYEQVLKIFSPYILTD 697
            A + E+PP GYR+NVGICL+ S  +KIF A++IHIP TWQMPQGGADEGEDL NAA RELREETGVTSAEF+AE P WLTYDFP +VK KLNR+W T+YKGQAQKWFLFKFTGKEEEINLLGDG+ KPEF  W WM PEQV+E AV FK+PVYE V+K F+PY + +
Sbjct:   52 ARTVESPPVGYRKNVGICLV-SPCRKIFTASKIHIPDTWQMPQGGADEGEDLRNAAFRELREETGVTSAEFIAEIPNWLTYDFPREVKDKLNRKWRTSYKGQAQKWFLFKFTGKEEEINLLGDGTAKPEFKVWSWMLPEQVIEHAVYFKRPVYEHVIKQFNPYFVDE 217          
BLAST of EY756985 vs. ExPASy Swiss-Prot
Match: NUD26_ARATH (Nudix hydrolase 26, chloroplastic OS=Arabidopsis thaliana GN=NUDT26 PE=1 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 2.100e-63
Identity = 117/204 (57.35%), Postives = 151/204 (74.02%), Query Frame = 2
Query:   77 QSYPTKLVKFASVPLELQQLPRKPXXXXXXXXXXXXXXFTALSTETPPDGYRRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPLKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWKWMFPEQVLERAVDFKKPVYEQVLKIFSPYI 688
            ++YP+K +KF+S+P  L +  +                    S E+PP+GYRRNVG+CL+NSSKK IF A+R+ IP  WQMPQGG DEGED   A +REL+EETGV SAE LAE P+W+TYDFP  V++KL  RWG+++KGQAQKWFL KFTGK+EEINLLGDG+EKPEF EW W  P+QV+E AV+FKKPVY++V+  F+ ++
Sbjct:   22 RNYPSKPIKFSSLPF-LHRCRKSRVSSSSARCCS--------SMESPPEGYRRNVGVCLMNSSKK-IFTASRLDIPSAWQMPQGGIDEGEDPRVAVMRELKEETGVHSAEILAEAPHWITYDFPPDVREKLKVRWGSDWKGQAQKWFLLKFTGKDEEINLLGDGTEKPEFGEWSWTSPDQVVENAVEFKKPVYKEVMSAFASHL 215          
BLAST of EY756985 vs. ExPASy Swiss-Prot
Match: NUD25_ARATH (Nudix hydrolase 25 OS=Arabidopsis thaliana GN=NUDT25 PE=1 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.786e-46
Identity = 88/162 (54.32%), Postives = 118/162 (72.84%), Query Frame = 2
Query:  209 ETPPDGYRRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPLKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEE--EINLLGDGSEKPEFNEWKWMFPEQVLERAVDFKKPVYEQVLKIFSPYI 688
            E  P GYR NVG+CLINS    +F A+R+++P  WQMPQGG ++GED  +AA+REL+EETGV SAE ++E P WLTYDFP  VK K+NR WG  + GQAQKW+L +    E+  EINL  + ++  EF EWKW  PE+V+E+AVD+K+P YE+V+K F  ++
Sbjct:    2 ENLPPGYRPNVGVCLINSDNL-VFVASRLNVPGAWQMPQGGIEDGEDPKSAAMRELQEETGVVSAEIVSEVPNWLTYDFPPAVKAKVNRLWGGEWHGQAQKWYLVRLRNDEDEKEINLANNEADS-EFAEWKWAKPEEVVEQAVDYKRPTYEEVIKTFGSFL 161          
BLAST of EY756985 vs. ExPASy Swiss-Prot
Match: RPPH_RHOSK (RNA pyrophosphohydrolase OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=rppH PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.271e-32
Identity = 75/157 (47.77%), Postives = 101/157 (64.33%), Query Frame = 2
Query:  227 YRRNVGICLINSSKKKIFAATRIHIPY-TWQMPQGGADEGEDLINAALRELREETGVTS--AEFLAETPYWLTYDFPLKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWKWMFPEQVLERAVDFKKPVYEQVLKIFSPYI 688
            YR  VGI LIN  +  IFA  RI  P   WQMPQGG DEGE    AALREL EETG+ +   EF+A+ P W+TYD P    + L R WG  Y+GQ QKWFL+++ G +EE+   G G++  EF+ W+W+  E+++   V FK+ VYE+V+  F P++
Sbjct:   12 YRPCVGIVLINR-EGLIFAGQRIDSPVPAWQMPQGGIDEGEKPREAALRELWEETGIPAERVEFVAKAPDWVTYDLP---PELLGRVWGGKYRGQRQKWFLYRYLGTDEEV---GIGTDHAEFSCWRWIGAEEMVAAIVPFKRAVYEEVVATFRPHL 161          
BLAST of EY756985 vs. ExPASy Swiss-Prot
Match: RPPH_RHOS4 (RNA pyrophosphohydrolase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=rppH PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.271e-32
Identity = 75/157 (47.77%), Postives = 101/157 (64.33%), Query Frame = 2
Query:  227 YRRNVGICLINSSKKKIFAATRIHIPY-TWQMPQGGADEGEDLINAALRELREETGVTS--AEFLAETPYWLTYDFPLKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWKWMFPEQVLERAVDFKKPVYEQVLKIFSPYI 688
            YR  VGI LIN  +  IFA  RI  P   WQMPQGG DEGE    AALREL EETG+ +   EF+A+ P W+TYD P    + L R WG  Y+GQ QKWFL+++ G +EE+   G G++  EF+ W+W+  E+++   V FK+ VYE+V+  F P++
Sbjct:   12 YRPCVGIVLINR-EGLIFAGQRIDSPVPAWQMPQGGIDEGEKPREAALRELWEETGIPAERVEFVAKAPDWVTYDLP---PELLGRVWGGKYRGQRQKWFLYRYLGTDEEV---GIGTDHAEFSCWRWIGAEEMVAAIVPFKRAVYEEVVATFRPHL 161          
BLAST of EY756985 vs. ExPASy Swiss-Prot
Match: RPPH_RHORT (RNA pyrophosphohydrolase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=rppH PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.271e-32
Identity = 69/147 (46.94%), Postives = 96/147 (65.31%), Query Frame = 2
Query:  227 YRRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPLKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWKWMFPEQVLERAVDFKKPVYEQVL 667
            YR+ VGI LIN+ + ++F A R+  P  WQMPQGG D GED   AA RE+ EE G  +A  L ET  WL YD P +++ +L   WG  ++GQ QKWF F+FTG++ +INL    +  PEF+ W+W+  + ++   V FK+PVYEQV+
Sbjct:   14 YRQGVGIMLINA-RGQVFVARRLDSPEAWQMPQGGIDAGEDPETAAWREMEEEIGTRNALLLGETAGWLGYDLPEELRGRL---WGGRFQGQRQKWFAFRFTGQDADINL---ATAHPEFDAWRWVDVDTLVALIVPFKRPVYEQVV 153          
BLAST of EY756985 vs. ExPASy Swiss-Prot
Match: RPPH_RHOS1 (RNA pyrophosphohydrolase OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=rppH PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 9.516e-32
Identity = 74/157 (47.13%), Postives = 101/157 (64.33%), Query Frame = 2
Query:  227 YRRNVGICLINSSKKKIFAATRIHIPY-TWQMPQGGADEGEDLINAALRELREETGVTS--AEFLAETPYWLTYDFPLKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWKWMFPEQVLERAVDFKKPVYEQVLKIFSPYI 688
            YR  VGI LIN  +  IFA  RI  P   WQMPQGG DEGE    AALREL EETG+ +   EF+A+ P W+TYD P    + L R WG  Y+GQ QKWFL+++ G ++E+   G G++  EF+ W+W+  E+++   V FK+ VYE+V+  F P++
Sbjct:   12 YRPCVGIVLINR-EGLIFAGQRIDSPVPAWQMPQGGIDEGEKPREAALRELWEETGIPAERVEFVAKAPDWVTYDLP---PELLGRVWGGKYRGQRQKWFLYRYLGTDDEV---GIGTDHAEFSCWRWIGAEEMVAAIVPFKRAVYEEVVATFRPHL 161          
BLAST of EY756985 vs. ExPASy Swiss-Prot
Match: RPPH_RHOS5 (RNA pyrophosphohydrolase OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=rppH PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.052e-30
Identity = 74/157 (47.13%), Postives = 99/157 (63.06%), Query Frame = 2
Query:  227 YRRNVGICLINSSKKKIFAATRIHIPY-TWQMPQGGADEGEDLINAALRELREETGVTS--AEFLAETPYWLTYDFPLKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWKWMFPEQVLERAVDFKKPVYEQVLKIFSPYI 688
            YR  VGI LIN  +  IFA  RI  P   WQMPQGG D  E    AALREL+EETG+     EF+A+ P W+TYD P  +   L R WG  Y+GQ QKWFLF++ G +E+I   G  +E  EF+ W+W+  E+++   V FK+PVYE+V+ +F  ++
Sbjct:   12 YRPCVGIVLINR-EGLIFAGQRIDSPVPAWQMPQGGIDADEKPRQAALRELQEETGIPEDLVEFVAKAPEWVTYDLPPDL---LGRVWGGKYRGQRQKWFLFRYLGTDEQI---GIATEHAEFSCWRWIGAEEMVASIVPFKRPVYERVVAMFREHL 161          
BLAST of EY756985 vs. ExPASy Swiss-Prot
Match: RPPH_DINSH (RNA pyrophosphohydrolase OS=Dinoroseobacter shibae (strain DFL 12) GN=rppH PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.374e-30
Identity = 72/158 (45.57%), Postives = 99/158 (62.66%), Query Frame = 2
Query:  227 YRRNVGICLINSSKKKIFAATRI--HIPYTWQMPQGGADEGEDLINAALRELREETGVT--SAEFLAETPYWLTYDFPLKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWKWMFPEQVLERAVDFKKPVYEQVLKIFSPYI 688
            YR+ VG+ L + + + +F   R    +P  WQMPQGG ++GED   AALREL EETGV     E LAETP W+ YD P ++  ++   W   YKGQAQ+W L KF G + +IN+    ++ PEF+EW+W+ P  VL+  V FK+ VYEQV   FS ++
Sbjct:   11 YRKCVGVVLWDGAGR-VFTGQRYDSELP-AWQMPQGGIEDGEDARTAALRELVEETGVAVEKVEVLAETPDWIKYDLPPEIVPRI---WKGRYKGQAQRWVLMKFLGSDADINI---ETKHPEFSEWRWLEPASVLDSIVPFKRDVYEQVFDAFSDWL 160          
BLAST of EY756985 vs. ExPASy Swiss-Prot
Match: RPPH_NITWN (RNA pyrophosphohydrolase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=rppH PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 8.907e-30
Identity = 72/157 (45.86%), Postives = 90/157 (57.32%), Query Frame = 2
Query:  227 YRRNVGICLINSSKKKIFAATRIHIP-----YTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPLKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDG-SEKPEFNEWKWMFPEQVLERAVDFKKPVYEQVLKIFS 679
            YR  VG+ LIN  +  +F   R  +      Y WQMPQGG D GED   AA REL EET V S E LAE P WLTYD P  V     R W   Y+GQ QKW+  +F G++ EIN+   G   KPEF  W+W   + +    + FK+PVYE+V+K F+
Sbjct:    9 YRTCVGMMLINE-RGLVFVGRRAGVEQVDDSYVWQMPQGGVDPGEDTWLAAKRELYEETSVRSIEKLAEIPDWLTYDIPRVV---AGRAWKGRYRGQRQKWYAVRFIGEDNEINIANPGDGHKPEFTAWRWEPMQNLTGLIIPFKRPVYERVVKEFA 161          
The following BLAST results are available for this feature:
BLAST of EY756985 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 325
Match NameE-valueIdentityDescription
NUD27_ARATH2.562e-6973.65Nudix hydrolase 27, chloroplastic OS=Arabidopsis t... [more]
NUD26_ARATH2.100e-6357.35Nudix hydrolase 26, chloroplastic OS=Arabidopsis t... [more]
NUD25_ARATH1.786e-4654.32Nudix hydrolase 25 OS=Arabidopsis thaliana GN=NUDT... [more]
RPPH_RHOSK4.271e-3247.77RNA pyrophosphohydrolase OS=Rhodobacter sphaeroide... [more]
RPPH_RHOS44.271e-3247.77RNA pyrophosphohydrolase OS=Rhodobacter sphaeroide... [more]
RPPH_RHORT4.271e-3246.94RNA pyrophosphohydrolase OS=Rhodospirillum rubrum ... [more]
RPPH_RHOS19.516e-3247.13RNA pyrophosphohydrolase OS=Rhodobacter sphaeroide... [more]
RPPH_RHOS51.052e-3047.13RNA pyrophosphohydrolase OS=Rhodobacter sphaeroide... [more]
RPPH_DINSH1.374e-3045.57RNA pyrophosphohydrolase OS=Dinoroseobacter shibae... [more]
RPPH_NITWN8.907e-3045.86RNA pyrophosphohydrolase OS=Nitrobacter winogradsk... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-015-H11-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756985 ID=EY756985; Name=EY756985; organism=Citrus sinensis; type=EST; length=873bp
CCACGCGTCCGCGACGCGTAAAATGGCTGTAACTGGAGTGAGCGGAAATT
CCCTGTTTTATCGGGTGGTGGTAAGTCAGAGTTACCCTACGAAGTTGGTT
AAATTTGCGAGTGTGCCACTGGAGCTGCAGCAGCTGCCACGTAAGCCCTT
GTGCTGTTCCTGTGATGATTCTTCTTCATCGTTATCTTCTTTTACGGCTT
TATCTACGGAGACGCCGCCAGATGGGTATAGAAGAAATGTCGGGATTTGT
CTCATTAATTCTTCTAAAAAGAAAATCTTTGCAGCTACGAGAATACACAT
ACCATATACATGGCAAATGCCTCAGGGCGGTGCTGATGAGGGTGAGGATT
TGATAAATGCAGCTCTACGAGAATTAAGAGAAGAAACTGGGGTTACTTCA
GCAGAATTTCTTGCAGAGACACCTTATTGGCTGACCTATGATTTCCCACT
TAAAGTCAAACAAAAACTTAATCGTCGGTGGGGAACAAATTATAAAGGTC
AAGCACAGAAGTGGTTTCTTTTCAAGTTCACTGGAAAGGAGGAAGAGATC
AATCTGTTGGGCGATGGATCAGAAAAGCCAGAGTTCAATGAGTGGAAGTG
GATGTTTCCCGAACAAGTTTTAGAGCGAGCTGTGGATTTCAAGAAGCCAG
TCTATGAACAAGTTTTGAAGATATTTAGTCCTTATATTTTGACGGACGCT
GATGAAAGAATTGNTTTGAACGGACGAAGGCCATATTAATTTCANGGCGA
CAGGCAGAAATTTTACACATTGAAAACATGAAGGGGACTAAATTATTTTG
TGACTTCTTGGGGTGTCTTGAATTGCTTGGACTCTGATCCGGAAGTGATT
ATGCCCATCCTTTTTGGATTTGG
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