EY756962

Overview
NameEY756962
Unique NameEY756962
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length520
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756962 vs. ExPASy Swiss-Prot
Match: METE_SOLSC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Solenostemon scutellarioides GN=MET PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 3.328e-22
Identity = 51/59 (86.44%), Postives = 52/59 (88.14%), Query Frame = 3
Query:    9 PRIPSTEEIVDRIYEMRTVLETNILWVNPDCGLKTRKYTEVKPALSNMVAATKLLRTQL 185
            PRIPSTEEI DRI +M  VLETNILWVNPDCGLKTRKY EVKPAL NMVAA KLLRTQL
Sbjct:  702 PRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYAEVKPALENMVAAAKLLRTQL 760          
BLAST of EY756962 vs. ExPASy Swiss-Prot
Match: METE_CATRO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Catharanthus roseus GN=METE PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 2.817e-21
Identity = 48/59 (81.36%), Postives = 52/59 (88.14%), Query Frame = 3
Query:    9 PRIPSTEEIVDRIYEMRTVLETNILWVNPDCGLKTRKYTEVKPALSNMVAATKLLRTQL 185
            PRIPSTEEI DRI +M  VL+TNILWVNPDCGLKTRKY EVKPAL NMV+A KL+RTQL
Sbjct:  703 PRIPSTEEIADRINKMLAVLDTNILWVNPDCGLKTRKYAEVKPALENMVSAAKLIRTQL 761          
BLAST of EY756962 vs. ExPASy Swiss-Prot
Match: METE_ARATH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Arabidopsis thaliana GN=CIMS PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.068e-20
Identity = 46/59 (77.97%), Postives = 51/59 (86.44%), Query Frame = 3
Query:    9 PRIPSTEEIVDRIYEMRTVLETNILWVNPDCGLKTRKYTEVKPALSNMVAATKLLRTQL 185
            PRIPS+EEI DR+ +M  VLE NILWVNPDCGLKTRKYTEVKPAL NMV A KL+R+QL
Sbjct:  703 PRIPSSEEIADRVNKMLAVLEQNILWVNPDCGLKTRKYTEVKPALKNMVDAAKLIRSQL 761          
BLAST of EY756962 vs. ExPASy Swiss-Prot
Match: METE_MESCR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mesembryanthemum crystallinum GN=METE PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.002e-18
Identity = 44/59 (74.58%), Postives = 49/59 (83.05%), Query Frame = 3
Query:    9 PRIPSTEEIVDRIYEMRTVLETNILWVNPDCGLKTRKYTEVKPALSNMVAATKLLRTQL 185
            PRIP TEE+ DRI +M  VLE+N+LWVNPDCGLKTRKY EV PALSNMVAA K LR +L
Sbjct:  703 PRIPPTEELADRIRKMLAVLESNVLWVNPDCGLKTRKYGEVNPALSNMVAAAKQLRQEL 761          
BLAST of EY756962 vs. ExPASy Swiss-Prot
Match: METE_BRAJA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bradyrhizobium japonicum GN=metE PE=3 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 8.217e-13
Identity = 34/56 (60.71%), Postives = 44/56 (78.57%), Query Frame = 3
Query:    9 PRIPSTEEIVDRIYEMRTVLETNILWVNPDCGLKTRKYTEVKPALSNMVAATKLLR 176
            PR+P T+E+ + I   RT L+ + LWVNPDCGLKTRK+ EV+PAL+NMVAA + LR
Sbjct:  718 PRVPETDEMKELIVLARTRLQDSQLWVNPDCGLKTRKWEEVRPALANMVAAARELR 773          
BLAST of EY756962 vs. ExPASy Swiss-Prot
Match: METE_BIFAA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=metE PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.078e-12
Identity = 32/59 (54.24%), Postives = 42/59 (71.19%), Query Frame = 3
Query:    9 PRIPSTEEIVDRIYEMRTVLETNILWVNPDCGLKTRKYTEVKPALSNMVAATKLLRTQL 185
            PRIPS +EI DRIYE+   ++   +W+NPDCGLKTR   E  P+L N+VAA K +R +L
Sbjct:  708 PRIPSEQEIEDRIYEILKKMDVEKVWINPDCGLKTRGNAETWPSLENLVAAAKAVRAKL 766          
BLAST of EY756962 vs. ExPASy Swiss-Prot
Match: METE_BIFLO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bifidobacterium longum GN=metE PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.326e-12
Identity = 32/59 (54.24%), Postives = 42/59 (71.19%), Query Frame = 3
Query:    9 PRIPSTEEIVDRIYEMRTVLETNILWVNPDCGLKTRKYTEVKPALSNMVAATKLLRTQL 185
            PRIPS +EI DRIYE+   ++   +W+NPDCGLKTR   E  P+L N+VAA K +R +L
Sbjct:  707 PRIPSEKEIEDRIYEILDKMDVKKVWINPDCGLKTRGNAETWPSLENLVAAAKAVRAKL 765          
BLAST of EY756962 vs. ExPASy Swiss-Prot
Match: METE_BIFLD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bifidobacterium longum (strain DJO10A) GN=metE PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.326e-12
Identity = 32/59 (54.24%), Postives = 42/59 (71.19%), Query Frame = 3
Query:    9 PRIPSTEEIVDRIYEMRTVLETNILWVNPDCGLKTRKYTEVKPALSNMVAATKLLRTQL 185
            PRIPS +EI DRIYE+   ++   +W+NPDCGLKTR   E  P+L N+VAA K +R +L
Sbjct:  707 PRIPSEKEIEDRIYEILDKMDVKKVWINPDCGLKTRGNAETWPSLENLVAAAKAVRAKL 765          
BLAST of EY756962 vs. ExPASy Swiss-Prot
Match: METE_BIFLI (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=metE PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.643e-11
Identity = 31/59 (52.54%), Postives = 42/59 (71.19%), Query Frame = 3
Query:    9 PRIPSTEEIVDRIYEMRTVLETNILWVNPDCGLKTRKYTEVKPALSNMVAATKLLRTQL 185
            PRIPS +EI DRIYE+   ++   +W+NPDCGLKTR   E  P+L ++VAA K +R +L
Sbjct:  707 PRIPSEKEIEDRIYEILDKIDVKKVWINPDCGLKTRGNDETWPSLEHLVAAAKAVRARL 765          
BLAST of EY756962 vs. ExPASy Swiss-Prot
Match: METE_CYTH3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=metE PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.509e-11
Identity = 30/60 (50.00%), Postives = 43/60 (71.67%), Query Frame = 3
Query:    9 PRIPSTEEIVDRIYEMRTVLETNILWVNPDCGLKTRKYTEVKPALSNMVAATKLLRTQLT 188
            PRIP+T+E+ D + +   VL    +WVNPDCGLKTR++ E + AL NMVAA + +R ++T
Sbjct:  713 PRIPTTDEMADLLNKAMHVLPVRNIWVNPDCGLKTRRWPETEAALINMVAAAQKIRKEIT 772          
The following BLAST results are available for this feature:
BLAST of EY756962 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
METE_SOLSC3.328e-2286.445-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CATRO2.817e-2181.365-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ARATH4.068e-2077.975-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MESCR1.002e-1874.585-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BRAJA8.217e-1360.715-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BIFAA4.078e-1254.245-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BIFLO5.326e-1254.245-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BIFLD5.326e-1254.245-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BIFLI2.643e-1152.545-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CYTH34.509e-1150.005-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-015-F09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756962 ID=EY756962; Name=EY756962; organism=Citrus sinensis; type=EST; length=520bp
CCACGCGTCCGAGAATACCATCAACCGAAGAAATTGTTGACAGAATCTAC
GAGATGCGTACTGTGCTAGAAACCAACATTTTGTGGGTTAACCCTGACTG
TGGTCTCAAGACTCGCAAGTACACTGAGGTGAAGCCAGCCCTCTCAAACA
TGGTTGCTGCCACCAAGCTACTCCGCACCCAGCTGACAGTGCCAAGGAGA
TTGGAGGGATCCTTTCTGAGCCATTGTGCTTCTATATTCGAACAAACAAA
GGCATTCCTGTCTTATTACCTATTCGAGTAACTGTGGGTCGTGACGAAAA
TTTTCCGTGGGCATATTAGGCACTTTTGAACAATTGGCTTTTCTTTTTCT
CTGCTTGTATTTTCCGTTTTTAAAGGCCCCGGATTGCTATCCGTTTTTAA
AGGCCCCGGATTGCTATCCGTTTTTAAGGGCATGTTTGGTGTATTGGATT
ACATAGTATTAAAACCCTGTATAATATTAAATTTACACGANNNANANAAA
AAANAAAAANAAAAAAAAAA
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