EY756950

Overview
NameEY756950
Unique NameEY756950
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length594
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4536 contig Csv1_Contig4536:216..806. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY756950 vs. ExPASy Swiss-Prot
Match: RL321_ARATH (60S ribosomal protein L32-1 OS=Arabidopsis thaliana GN=RPL32A PE=2 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 4.085e-55
Identity = 101/113 (89.38%), Postives = 110/113 (97.35%), Query Frame = 1 
Query:   55 PQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDIVVTNKLARLRSQEDE 393
            PQSDR+I+VKE+WRRPKGIDSRVRRKFKG TLMPN+GYGSDKKTRHYLPNGFKKFVVHNT ELELLMMHNRTYCAEIAH+VST+KRK IVERA+QLD+VVTN+LARLRSQEDE
Sbjct:   21 PQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGSDKKTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTKKRKAIVERASQLDVVVTNRLARLRSQEDE 133
[Close]
BLAST of EY756950 vs. ExPASy Swiss-Prot
Match: RL322_ARATH (60S ribosomal protein L32-2 OS=Arabidopsis thaliana GN=RPL32B PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 2.648e-54
Identity = 98/113 (86.73%), Postives = 109/113 (96.46%), Query Frame = 1 
Query:   55 PQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDIVVTNKLARLRSQEDE 393
            PQSDR+I+VKE+WRRPKGIDSRVRRKFKG TLMPN+GYGSDKKTRHYLPNGFKKF+VHNT ELELLMMHNRTYCAEIAH++ST+KRK IVERA+QLD+VV+NKL RLRSQEDE
Sbjct:   21 PQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGSDKKTRHYLPNGFKKFIVHNTSELELLMMHNRTYCAEIAHNISTKKRKAIVERASQLDVVVSNKLGRLRSQEDE 133
[Close]
BLAST of EY756950 vs. ExPASy Swiss-Prot
Match: RL32_SPOFR (60S ribosomal protein L32 OS=Spodoptera frugiperda GN=RpL32 PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 2.570e-41
Identity = 81/112 (72.32%), Postives = 94/112 (83.93%), Query Frame = 1 
Query:   58 QSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDIVVTNKLARLRSQEDE 393
            QSDR   +K NWR+P+GID+RVRR+FKG  LMPNIGYGS+KKTRH LPNGF+K +VHN +ELE+LMM NR YCAEIAH VS++KRK IVERA QL I VTN  ARLRSQE+E
Sbjct:   23 QSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPNGFRKVLVHNVRELEILMMQNRKYCAEIAHGVSSKKRKTIVERAQQLSIRVTNSAARLRSQENE 134
[Close]
BLAST of EY756950 vs. ExPASy Swiss-Prot
Match: RL32_RAT (60S ribosomal protein L32 OS=Rattus norvegicus GN=Rpl32 PE=1 SV=2)

HSP 1 Score: 167.162 bits (422), Expect = 5.726e-41
Identity = 78/112 (69.64%), Postives = 98/112 (87.50%), Query Frame = 1 
Query:   58 QSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDIVVTNKLARLRSQEDE 393
            QSDR + +K NWR+P+GID+RVRR+FKG  LMPNIGYGS+KKT+H LP+GF+KF+VHN KELE+L+M N++YCAEIAH+VS++ RK IVERAAQL I VTN  ARLRS+E+E
Sbjct:   24 QSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLRSEENE 135
[Close]
BLAST of EY756950 vs. ExPASy Swiss-Prot
Match: RL32_PIG (60S ribosomal protein L32 OS=Sus scrofa GN=RPL32 PE=2 SV=3)

HSP 1 Score: 167.162 bits (422), Expect = 5.726e-41
Identity = 78/112 (69.64%), Postives = 98/112 (87.50%), Query Frame = 1 
Query:   58 QSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDIVVTNKLARLRSQEDE 393
            QSDR + +K NWR+P+GID+RVRR+FKG  LMPNIGYGS+KKT+H LP+GF+KF+VHN KELE+L+M N++YCAEIAH+VS++ RK IVERAAQL I VTN  ARLRS+E+E
Sbjct:   24 QSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLRSEENE 135
[Close]
BLAST of EY756950 vs. ExPASy Swiss-Prot
Match: RL32_MOUSE (60S ribosomal protein L32 OS=Mus musculus GN=Rpl32 PE=2 SV=2)

HSP 1 Score: 167.162 bits (422), Expect = 5.726e-41
Identity = 78/112 (69.64%), Postives = 98/112 (87.50%), Query Frame = 1 
Query:   58 QSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDIVVTNKLARLRSQEDE 393
            QSDR + +K NWR+P+GID+RVRR+FKG  LMPNIGYGS+KKT+H LP+GF+KF+VHN KELE+L+M N++YCAEIAH+VS++ RK IVERAAQL I VTN  ARLRS+E+E
Sbjct:   24 QSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLRSEENE 135
[Close]
BLAST of EY756950 vs. ExPASy Swiss-Prot
Match: RL32_MACFA (60S ribosomal protein L32 OS=Macaca fascicularis GN=RPL32 PE=2 SV=3)

HSP 1 Score: 167.162 bits (422), Expect = 5.726e-41
Identity = 78/112 (69.64%), Postives = 98/112 (87.50%), Query Frame = 1 
Query:   58 QSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDIVVTNKLARLRSQEDE 393
            QSDR + +K NWR+P+GID+RVRR+FKG  LMPNIGYGS+KKT+H LP+GF+KF+VHN KELE+L+M N++YCAEIAH+VS++ RK IVERAAQL I VTN  ARLRS+E+E
Sbjct:   24 QSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLRSEENE 135
[Close]
BLAST of EY756950 vs. ExPASy Swiss-Prot
Match: RL32_HUMAN (60S ribosomal protein L32 OS=Homo sapiens GN=RPL32 PE=1 SV=2)

HSP 1 Score: 167.162 bits (422), Expect = 5.726e-41
Identity = 78/112 (69.64%), Postives = 98/112 (87.50%), Query Frame = 1 
Query:   58 QSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDIVVTNKLARLRSQEDE 393
            QSDR + +K NWR+P+GID+RVRR+FKG  LMPNIGYGS+KKT+H LP+GF+KF+VHN KELE+L+M N++YCAEIAH+VS++ RK IVERAAQL I VTN  ARLRS+E+E
Sbjct:   24 QSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLRSEENE 135
[Close]
BLAST of EY756950 vs. ExPASy Swiss-Prot
Match: RL32_BOVIN (60S ribosomal protein L32 OS=Bos taurus GN=RPL32 PE=2 SV=3)

HSP 1 Score: 166.777 bits (421), Expect = 7.479e-41
Identity = 77/112 (68.75%), Postives = 98/112 (87.50%), Query Frame = 1 
Query:   58 QSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDIVVTNKLARLRSQEDE 393
            QSDR + +K NWR+P+GID+RVRR+FKG  LMPNIGYGS+KKT+H LP+GF+KF+VHN KELE+L+M N++YCAEIAH+VS++ RK IVERAAQL I +TN  ARLRS+E+E
Sbjct:   24 QSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRITNPNARLRSEENE 135
[Close]
BLAST of EY756950 vs. ExPASy Swiss-Prot
Match: RL32_ICTPU (60S ribosomal protein L32 OS=Ictalurus punctatus GN=rpl32 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 4.847e-40
Identity = 77/112 (68.75%), Postives = 96/112 (85.71%), Query Frame = 1 
Query:   58 QSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDIVVTNKLARLRSQEDE 393
            QSDR + ++ NWR+P+GID+RVR  FKG  LMPNIGYGS+KKT+H LP+GFKKF+VHN KELE+L+M N++YCAEIAH+VS++ RK IVERAAQL I VTN  ARLRS+E+E
Sbjct:   24 QSDRYVKIRRNWRKPRGIDNRVRSGFKGQMLMPNIGYGSNKKTKHMLPSGFKKFLVHNVKELEVLLMSNKSYCAEIAHNVSSKNRKVIVERAAQLAIKVTNPNARLRSEENE 135
The following BLAST results are available for this feature:
BLAST of EY756950 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
RL321_ARATH4.085e-5589.3860S ribosomal protein L32-1 OS=Arabidopsis thalian... [more]
RL322_ARATH2.648e-5486.7360S ribosomal protein L32-2 OS=Arabidopsis thalian... [more]
RL32_SPOFR2.570e-4172.3260S ribosomal protein L32 OS=Spodoptera frugiperda... [more]
RL32_RAT5.726e-4169.6460S ribosomal protein L32 OS=Rattus norvegicus GN=... [more]
RL32_PIG5.726e-4169.6460S ribosomal protein L32 OS=Sus scrofa GN=RPL32 P... [more]
RL32_MOUSE5.726e-4169.6460S ribosomal protein L32 OS=Mus musculus GN=Rpl32... [more]
RL32_MACFA5.726e-4169.6460S ribosomal protein L32 OS=Macaca fascicularis G... [more]
RL32_HUMAN5.726e-4169.6460S ribosomal protein L32 OS=Homo sapiens GN=RPL32... [more]
RL32_BOVIN7.479e-4168.7560S ribosomal protein L32 OS=Bos taurus GN=RPL32 P... [more]
RL32_ICTPU4.847e-4068.7560S ribosomal protein L32 OS=Ictalurus punctatus G... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-015-E07-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756950 ID=EY756950; Name=EY756950; organism=Citrus sinensis; type=EST; length=594bp
CCACGCGTCCGGTCGAAGAAGACAGTGAAGAAGAGGCTGAAGAAGTTCAA
GAGGCCTCAGAGCGATCGCAAGATCTCCGTCAAGGAAAATTGGCGCAGAC
CAAAGGGTATTGATTCCCGGGTGCGAAGAAAGTTCAAGGGATGCACTCTA
ATGCCCAACATTGGTTATGGTTCGGACAAGAAGACACGCCACTATCTTCC
AAATGGTTTCAAGAAATTTGTGGTGCACAATACGAAAGAGCTTGAATTGT
TGATGATGCACAACAGGACCTACTGTGCTGAAATTGCCCATGATGTTTCC
ACGAGGAAGAGGAAAGAGATTGTGGAGCGAGCTGCCCAACTTGATATTGT
TGTGACTAACAAGCTTGCTAGATTGAGAAGCCAGGAAGATGAATGAGATT
AAACAATCTGTTCTTTTTAGTAGTAGTGAGTCTTGTTTTGTACGCTTTAT
CAAAATTTTGAAAATTTTGACTTACAAAGATACGACCGTTTGTGATTTTT
TATTTTTTTTGGGATGAGTGATAATACAGTAGTTTTTATTTCATAAAAAT
ATTATTATTGCCGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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