EY756945

Overview
NameEY756945
Unique NameEY756945
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length556
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig454 contig Csv1_Contig454:758..1313. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY756945 vs. ExPASy Swiss-Prot
Match: Y4744_ARATH (Uncharacterized protein At4g06744 OS=Arabidopsis thaliana GN=At4g06744 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.235e-16
Identity = 49/111 (44.14%), Postives = 66/111 (59.46%), Query Frame = 2 
Query:    5 ASDQFYGPVPEIVCQLPK--LVNLSLSYNYFTQVGPECRKLIKRKVLDVRMNCILDLPNQRSREECGKFFSESKK--CPNERSLTLVPCARNRYTLNLTETFDKKLTAPAP 325
            A +  +G VPE VC L +  LVNLSLS NYFT VGP CR L+++ VLDV  NCI   P QRS +EC +FF + KK  CP+    +   C  +  + + +  F   + AP+P
Sbjct:  295 AGNLLFGAVPEAVCMLLRDNLVNLSLSDNYFTHVGPWCRGLLEKGVLDVGNNCIPFFPGQRSMQECAEFFVKPKKYYCPHMWFHSFFSCRYSHISSSSSSAF-MPMVAPSP 404
The following BLAST results are available for this feature:
BLAST of EY756945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4744_ARATH3.235e-1644.14Uncharacterized protein At4g06744 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-015-E01-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756945 ID=EY756945; Name=EY756945; organism=Citrus sinensis; type=EST; length=556bp
CCACGCGTCCGACCAATTTTACGGGCCAGTGCCGGAGATTGTGTGCCAGC
TGCCGAAGCTTGTCAACCTGTCTCTGTCTTACAATTATTTTACTCAGGTT
GGTCCTGAATGCAGGAAATTGATAAAGAGAAAGGTTCTTGATGTGAGAAT
GAACTGCATTTTGGATCTTCCGAATCAGAGATCGCGGGAGGAGTGCGGGA
AATTCTTCTCCGAGTCAAAGAAGTGTCCGAACGAGAGGTCGTTGACTTTG
GTTCCTTGTGCGAGGAATCGTTATACATTGAATTTAACCGAGACGTTTGA
TAAAAAATTAACGGCTCCAGCTCCATCACCTAGGACTTATGATGCCCTCA
AAAAGCATTTCTGATGATACCTATCATCATATGTAGTGCAACCAAATCTG
CATTCATCCAAGATGATTGATTGTTGCTATTTGTACGTAATTCTCCTACG
TTTCTAAGTGATTTATATGTTCTCCGTAGAAGCCATGTAAACTAGTTATT
TCCAATCCAATAAATCAATTTTTATTTAAAAAAAAAAAAAAAAAAAAAAA
AAAAAA
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