EY756901

Overview
NameEY756901
Unique NameEY756901
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length361
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4526 contig Csv1_Contig4526:647..1007. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756901 vs. ExPASy Swiss-Prot
Match: TPIS_PETHY (Triosephosphate isomerase, cytosolic OS=Petunia hybrida GN=TPIP1 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.246e-23
Identity = 52/62 (83.87%), Postives = 57/62 (91.94%), Query Frame = 1
Query:    1 LFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSAELK*NS 186
            L AN SPE+AA+TRIIYGGSVNGANCKEL  QPDVDGFLVGGASLKPEFIDIIK+AE+K N+
Sbjct:  193 LAANVSPEVAASTRIIYGGSVNGANCKELGGQPDVDGFLVGGASLKPEFIDIIKAAEVKRNA 254          
BLAST of EY756901 vs. ExPASy Swiss-Prot
Match: TPIS_ORYSJ (Triosephosphate isomerase, cytosolic OS=Oryza sativa subsp. japonica GN=TPI PE=1 SV=3)

HSP 1 Score: 97.4413 bits (241), Expect = 2.324e-20
Identity = 48/59 (81.36%), Postives = 52/59 (88.14%), Query Frame = 1
Query:    1 LFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSAELK 177
            L AN S E+A +TRIIYGGSV GANCKELAA+PDVDGFLVGGASLKPEFIDII SA +K
Sbjct:  193 LAANVSAEVAESTRIIYGGSVTGANCKELAAKPDVDGFLVGGASLKPEFIDIINSATVK 251          
BLAST of EY756901 vs. ExPASy Swiss-Prot
Match: TPIS_SECCE (Triosephosphate isomerase, cytosolic OS=Secale cereale PE=2 SV=3)

HSP 1 Score: 97.0561 bits (240), Expect = 3.035e-20
Identity = 47/59 (79.66%), Postives = 52/59 (88.14%), Query Frame = 1
Query:    1 LFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSAELK 177
            L  N SPE+A +TRIIYGGSV GA+CKELAAQPDVDGFLVGGASLKPEFIDII +A +K
Sbjct:  193 LKTNVSPEVAESTRIIYGGSVTGASCKELAAQPDVDGFLVGGASLKPEFIDIINAATVK 251          
BLAST of EY756901 vs. ExPASy Swiss-Prot
Match: TPIS_MAIZE (Triosephosphate isomerase, cytosolic OS=Zea mays PE=3 SV=3)

HSP 1 Score: 96.6709 bits (239), Expect = 3.964e-20
Identity = 47/59 (79.66%), Postives = 51/59 (86.44%), Query Frame = 1
Query:    1 LFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSAELK 177
            L  N SPE+A +TRIIYGGSV  ANCKELAAQPDVDGFLVGGASLKPEFIDII +A +K
Sbjct:  193 LKTNASPEVAESTRIIYGGSVTAANCKELAAQPDVDGFLVGGASLKPEFIDIINAATVK 251          
BLAST of EY756901 vs. ExPASy Swiss-Prot
Match: TPIS_ARATH (Triosephosphate isomerase, cytosolic OS=Arabidopsis thaliana GN=CTIMC PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 1.153e-19
Identity = 46/59 (77.97%), Postives = 50/59 (84.75%), Query Frame = 1
Query:    1 LFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSAELK 177
            L  N S ++AA TRIIYGGSVNG NCKEL  Q DVDGFLVGGASLKPEFIDIIK+AE+K
Sbjct:  193 LAKNVSADVAATTRIIYGGSVNGGNCKELGGQADVDGFLVGGASLKPEFIDIIKAAEVK 251          
BLAST of EY756901 vs. ExPASy Swiss-Prot
Match: TPIS_HORVU (Triosephosphate isomerase, cytosolic OS=Hordeum vulgare PE=1 SV=3)

HSP 1 Score: 93.9745 bits (232), Expect = 2.570e-19
Identity = 46/59 (77.97%), Postives = 51/59 (86.44%), Query Frame = 1
Query:    1 LFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSAELK 177
            L  N SPE+A +TRIIYGGSV GA+CKELAAQ DVDGFLVGGASLKPEFIDII +A +K
Sbjct:  193 LKTNVSPEVAESTRIIYGGSVTGASCKELAAQADVDGFLVGGASLKPEFIDIINAAAVK 251          
BLAST of EY756901 vs. ExPASy Swiss-Prot
Match: TPIS_LACSA (Triosephosphate isomerase, cytosolic (Fragment) OS=Lactuca sativa PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.356e-19
Identity = 44/56 (78.57%), Postives = 51/56 (91.07%), Query Frame = 1
Query:   10 NTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSAELK 177
            N S E++A+TRIIYGGSV+G+NCKEL  Q DVDGFLVGGASLKPEFIDIIK+AE+K
Sbjct:  137 NVSAEVSASTRIIYGGSVSGSNCKELGGQTDVDGFLVGGASLKPEFIDIIKAAEVK 192          
BLAST of EY756901 vs. ExPASy Swiss-Prot
Match: TPIS_COPJA (Triosephosphate isomerase, cytosolic OS=Coptis japonica PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.841e-18
Identity = 42/56 (75.00%), Postives = 48/56 (85.71%), Query Frame = 1
Query:   10 NTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSAELK 177
            N   ++A + RIIYGGSVNGAN KELA QPD+DGFLVGGASLKPEF+DIIKSA +K
Sbjct:  196 NVGADVAGSVRIIYGGSVNGANSKELAGQPDIDGFLVGGASLKPEFVDIIKSATVK 251          
BLAST of EY756901 vs. ExPASy Swiss-Prot
Match: TPIS_RABIT (Triosephosphate isomerase OS=Oryctolagus cuniculus GN=TPI1 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.141e-17
Identity = 41/57 (71.93%), Postives = 48/57 (84.21%), Query Frame = 1
Query:    1 LFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSAE 171
            L +N S  +A +TRIIYGGSV GA CKELA+QPDVDGFLVGGASLKPEF+DII + +
Sbjct:  192 LKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFVDIINAKQ 248          
BLAST of EY756901 vs. ExPASy Swiss-Prot
Match: TPIS_PONAB (Triosephosphate isomerase OS=Pongo abelii GN=TPI1 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.141e-17
Identity = 41/57 (71.93%), Postives = 48/57 (84.21%), Query Frame = 1
Query:    1 LFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSAE 171
            L +N S  +A +TRIIYGGSV GA CKELA+QPDVDGFLVGGASLKPEF+DII + +
Sbjct:  193 LKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFVDIINAKQ 249          
The following BLAST results are available for this feature:
BLAST of EY756901 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
TPIS_PETHY2.246e-2383.87Triosephosphate isomerase, cytosolic OS=Petunia hy... [more]
TPIS_ORYSJ2.324e-2081.36Triosephosphate isomerase, cytosolic OS=Oryza sati... [more]
TPIS_SECCE3.035e-2079.66Triosephosphate isomerase, cytosolic OS=Secale cer... [more]
TPIS_MAIZE3.964e-2079.66Triosephosphate isomerase, cytosolic OS=Zea mays P... [more]
TPIS_ARATH1.153e-1977.97Triosephosphate isomerase, cytosolic OS=Arabidopsi... [more]
TPIS_HORVU2.570e-1977.97Triosephosphate isomerase, cytosolic OS=Hordeum vu... [more]
TPIS_LACSA3.356e-1978.57Triosephosphate isomerase, cytosolic (Fragment) OS... [more]
TPIS_COPJA2.841e-1875.00Triosephosphate isomerase, cytosolic OS=Coptis jap... [more]
TPIS_RABIT3.141e-1771.93Triosephosphate isomerase OS=Oryctolagus cuniculus... [more]
TPIS_PONAB3.141e-1771.93Triosephosphate isomerase OS=Pongo abelii GN=TPI1 ... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-014-H11-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756901 ID=EY756901; Name=EY756901; organism=Citrus sinensis; type=EST; length=361bp
CTTTTTGCTAACACCAGTCCTGAAATTGCTGCAGCAACACGGATCATCTA
CGGAGGATCCGTAAATGGTGCAAACTGCAAGGAATTGGCTGCACAGCCTG
ATGTTGACGGATTTTTGGTTGGTGGTGCTTCGTTGAAGCCGGAGTTCATT
GACATCATCAAATCTGCTGAGCTGAAGTAAAATTCTTGAGCTTTATTTCA
AGGGCAGTTTGCTGATGAAGTATTTACTGTTTGTGGATATATAGAATACG
TTTGGTATAATTTCAGAATTACTTTTGTTTTTGATAAGCGCGACCAACTG
AAACCTTTTTTTAAACTTTTTTAATTATCTTTGTTTCCTAAAAAAAAAAA
AAAAAAAAAAA
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