EY720153

Overview
NameEY720153
Unique NameEY720153
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY720153_ssr80 microsatellite EY720153_ssr80:80..91. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY720153 vs. ExPASy Swiss-Prot
Match: APRR7_ARATH (Two-component response regulator-like APRR7 OS=Arabidopsis thaliana GN=APRR7 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.846e-27
Identity = 70/132 (53.03%), Postives = 79/132 (59.85%), Query Frame = 2
Query:  185 PQCGSSNVFESTNEGNAG--NYXXXXXXXXXXXXXXXXXXXXTALNAGVTNLDSDNGAAGNS---GVGGITERISGNVVDEVWVAQREAALTKFRHKRKERCFGKRVRYQSRKPLAEARPRVRGQFVRQLPA 565
            PQCGSSNV+  T EGN    NY                      +NAG  N+ SDNGA  N    G G  +   SGN+ DE  ++QREAALTKFR KRKERCF K+VRYQSRK LAE RPRVRGQFVR+  A
Sbjct:  583 PQCGSSNVYNETIEGNNNTVNYSVNGSVSGSGHGSNGPYGSSNGMNAGGMNMGSDNGAGKNGNGDGSGSGSGSGSGNLADENKISQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRKTAA 714          
BLAST of EY720153 vs. ExPASy Swiss-Prot
Match: PRR37_ORYSJ (Two-component response regulator-like PRR37 OS=Oryza sativa subsp. japonica GN=PRR37 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.009e-24
Identity = 73/157 (46.50%), Postives = 87/157 (55.41%), Query Frame = 2
Query:  152 DVSFKNMVAAAPQCGSSNVFESTNEGNAGNYXXXXXXXXXXXXXXXXXXXXTALNAGVTNLDSDNGAAGNSGVGGITERISGNVVDEVW--VAQRE---AALTKFRHKRKERCFGKRVRYQSRKPLAEARPRVRGQFVRQLPADAH---SGKDTASN 598
            DVS +N  + APQCGSSNVF+   EG+A NY                    TA+NA   N++  NG    SG GG     SG+  D       QRE   AA+ KFR KRKER FGK+VRYQSRK LAE RPRVRGQFVRQ   D      G++ A++
Sbjct:  585 DVSRENGGSGAPQCGSSNVFDPPVEGHAANYGVNGSNSGSNNGSNGQNGSTTAVNAERPNMEIANGTINKSGPGGGNGSGSGSGNDMYLKRFTQREHRVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQAVQDQQQQGGGREAAAD 741          
BLAST of EY720153 vs. ExPASy Swiss-Prot
Match: PRR37_ORYSI (Two-component response regulator-like PRR37 OS=Oryza sativa subsp. indica GN=PRR37 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 7.009e-24
Identity = 73/157 (46.50%), Postives = 87/157 (55.41%), Query Frame = 2
Query:  152 DVSFKNMVAAAPQCGSSNVFESTNEGNAGNYXXXXXXXXXXXXXXXXXXXXTALNAGVTNLDSDNGAAGNSGVGGITERISGNVVDEVW--VAQRE---AALTKFRHKRKERCFGKRVRYQSRKPLAEARPRVRGQFVRQLPADAH---SGKDTASN 598
            DVS +N  + APQCGSSNVF+   EG+A NY                    TA+NA   N++  NG    SG GG     SG+  D       QRE   AA+ KFR KRKER FGK+VRYQSRK LAE RPRVRGQFVRQ   D      G++ A++
Sbjct:  585 DVSRENGGSGAPQCGSSNVFDPPVEGHAANYGVNGSNSGSNNGSNGQNGSTTAVNAERPNMEIANGTINKSGPGGGNGSGSGSGNDMYLKRFTQREHRVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQAVQDQQQQGGGREAAAD 741          
BLAST of EY720153 vs. ExPASy Swiss-Prot
Match: PRR73_ORYSJ (Two-component response regulator-like PRR73 OS=Oryza sativa subsp. japonica GN=PRR73 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.479e-23
Identity = 64/135 (47.41%), Postives = 78/135 (57.78%), Query Frame = 2
Query:  188 QCGSSNVFESTNEGNAGNYXXXXXXXXXXXXXXXXXXXXTALNAGVTNLDSDNGAAGNSGVGGI--TERISGNVVDEVWVAQREAALTKFRHKRKERCFGKRVRYQSRKPLAEARPRVRGQFVRQLPADAHSGKD 586
            QCGSSNVF+   EG+A NY                    TA N G  N+++ NG    +G GG   +   SGN + +  V  REAAL KFR KRK R FGK+VRYQSRK LAE RPR+RGQFVRQ   +  +G+D
Sbjct:  630 QCGSSNVFDPPIEGHAANYSVNGSFSGGHNGNNGQRGPSTAPNVGRPNMETVNGIVDENGAGGGNGSGSGSGNDLYQNGVCYREAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIRGQFVRQSGQEDQAGQD 764          
BLAST of EY720153 vs. ExPASy Swiss-Prot
Match: PRR73_ORYSI (Two-component response regulator-like PRR73 OS=Oryza sativa subsp. indica GN=PRR73 PE=2 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 3.479e-23
Identity = 64/135 (47.41%), Postives = 78/135 (57.78%), Query Frame = 2
Query:  188 QCGSSNVFESTNEGNAGNYXXXXXXXXXXXXXXXXXXXXTALNAGVTNLDSDNGAAGNSGVGGI--TERISGNVVDEVWVAQREAALTKFRHKRKERCFGKRVRYQSRKPLAEARPRVRGQFVRQLPADAHSGKD 586
            QCGSSNVF+   EG+A NY                    TA N G  N+++ NG    +G GG   +   SGN + +  V  REAAL KFR KRK R FGK+VRYQSRK LAE RPR+RGQFVRQ   +  +G+D
Sbjct:  630 QCGSSNVFDPPIEGHAANYSVNGSFSGGHNGNNGQRGPSTAPNVGRPNMETVNGIVDENGAGGGNGSGSGSGNDLYQNGVCYREAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIRGQFVRQSGQEDQAGQD 764          
BLAST of EY720153 vs. ExPASy Swiss-Prot
Match: APRR9_ARATH (Two-component response regulator-like APRR9 OS=Arabidopsis thaliana GN=APRR9 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.913e-13
Identity = 37/50 (74.00%), Postives = 43/50 (86.00%), Query Frame = 2
Query:  422 AQREAALTKFRHKRKERCFGKRVRYQSRKPLAEARPRVRGQFVRQLPADA 571
            +QREAAL KFR KRK+RCF K+VRYQSRK LAE RPRV+GQFVR + +DA
Sbjct:  415 SQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRTVNSDA 464          
BLAST of EY720153 vs. ExPASy Swiss-Prot
Match: PRR1_ORYSJ (Two-component response regulator-like PRR1 OS=Oryza sativa subsp. japonica GN=PRR1 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.263e-13
Identity = 41/72 (56.94%), Postives = 46/72 (63.89%), Query Frame = 2
Query:  425 QREAALTKFRHKRKERCFGKRVRYQSRKPLAEARPRVRGQFVRQLPADAHSGKDTASNGHTAGDDSSDHPRS 640
            +R AAL KFR KRKERCF K+VRY +RK LAE RPRVRGQFVRQ      +  D  S G    +D  D P S
Sbjct:  442 RRAAALAKFRLKRKERCFDKKVRYVNRKKLAETRPRVRGQFVRQA-----NYTDITSTGDDISEDEDDDPSS 508          
BLAST of EY720153 vs. ExPASy Swiss-Prot
Match: PRR95_ORYSJ (Two-component response regulator-like PRR95 OS=Oryza sativa subsp. japonica GN=PRR95 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.567e-13
Identity = 41/60 (68.33%), Postives = 46/60 (76.67%), Query Frame = 2
Query:  392 SGNVVDEV-----WVAQREAALTKFRHKRKERCFGKRVRYQSRKPLAEARPRVRGQFVRQ 556
            S NVV E       ++QREAAL KFR KRK+RCF K+VRYQSRK LAE RPRV+GQFVRQ
Sbjct:  557 SSNVVPENPDGLRHLSQREAALNKFRLKRKDRCFEKKVRYQSRKLLAEQRPRVKGQFVRQ 616          
BLAST of EY720153 vs. ExPASy Swiss-Prot
Match: APRR5_ARATH (Two-component response regulator-like APRR5 OS=Arabidopsis thaliana GN=APRR5 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 7.270e-13
Identity = 34/45 (75.56%), Postives = 41/45 (91.11%), Query Frame = 2
Query:  425 QREAALTKFRHKRKERCFGKRVRYQSRKPLAEARPRVRGQFVRQL 559
            QREAALTKFR KRK+RC+ K+VRY+SRK LAE RPR++GQFVRQ+
Sbjct:  508 QREAALTKFRMKRKDRCYEKKVRYESRKKLAEQRPRIKGQFVRQV 552          
BLAST of EY720153 vs. ExPASy Swiss-Prot
Match: APRR3_ARATH (Two-component response regulator-like APRR3 OS=Arabidopsis thaliana GN=APRR3 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.038e-12
Identity = 34/45 (75.56%), Postives = 38/45 (84.44%), Query Frame = 2
Query:  422 AQREAALTKFRHKRKERCFGKRVRYQSRKPLAEARPRVRGQFVRQ 556
            AQREAAL KFR KRKERCF K+VRY SRK LAE RP V+GQF+R+
Sbjct:  440 AQREAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPHVKGQFIRK 484          
The following BLAST results are available for this feature:
BLAST of EY720153 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
APRR7_ARATH8.846e-2753.03Two-component response regulator-like APRR7 OS=Ara... [more]
PRR37_ORYSJ7.009e-2446.50Two-component response regulator-like PRR37 OS=Ory... [more]
PRR37_ORYSI7.009e-2446.50Two-component response regulator-like PRR37 OS=Ory... [more]
PRR73_ORYSJ3.479e-2347.41Two-component response regulator-like PRR73 OS=Ory... [more]
PRR73_ORYSI3.479e-2347.41Two-component response regulator-like PRR73 OS=Ory... [more]
APRR9_ARATH1.913e-1374.00Two-component response regulator-like APRR9 OS=Ara... [more]
PRR1_ORYSJ3.263e-1356.94Two-component response regulator-like PRR1 OS=Oryz... [more]
PRR95_ORYSJ5.567e-1368.33Two-component response regulator-like PRR95 OS=Ory... [more]
APRR5_ARATH7.270e-1375.56Two-component response regulator-like APRR5 OS=Ara... [more]
APRR3_ARATH8.038e-1275.56Two-component response regulator-like APRR3 OS=Ara... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-002-G08-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720153 ID=EY720153; Name=EY720153; organism=Citrus sinensis; type=EST; length=851bp
CACCACGCGTCCGGATATGGGACTTAACTCAGGTCAATCACAATTGAGAG
GGTCACACCATTCAGTTCAAGTGGAGAATCACCACCACCACTACCACCGT
CATTATCATCAGCACGACCACAACATGCAGCAGTCACCACAGGACTGTGA
TGATGTCTCGTTCAAGAATATGGTAGCTGCAGCTCCACAGTGTGGGTCAT
CAAATGTATTTGAGAGTACCAATGAAGGTAATGCTGGAAATTATAGTGTG
AATGGGAGTGCCTCGGGGAGTAACCACGGCAGCAATGGACAAAATGGAAG
CAGCACTGCCTTGAATGCTGGAGTAACAAATTTGGACAGTGACAATGGGG
CAGCAGGAAATAGTGGAGTTGGTGGCATAACTGAAAGAATCAGTGGAAAT
GTGGTAGATGAAGTTTGGGTTGCTCAGAGAGAAGCTGCCTTGACTAAATT
TCGCCATAAAAGGAAAGAAAGGTGTTTCGGGAAGAGGGTTCGATATCAAA
GCCGGAAACCATTGGCAGAAGCAAGGCCACGTGTCAGGGGACAGTTTGTT
CGACAACTACCGGCAGATGCCCATTCAGGAAAAGATACCGCAAGCAACGG
CCATACCGCTGGAGACGATTCTAGTGACCATCCCAGATCACCTTGTGGCA
CGGCGGCAGATTTCTAGGATCAACCGGTACTCCCTGATTAATCATGTCAA
TCGGGGTGCGTGAGATCACGTTAAAAGCTCCTGGTCGGAATGGGGTCGCT
CAAGCGCGTAATCTGGGACCGGAGTGGAGAAATCCTGCAGGGCCGTTTGT
CGGTTCGTACGCATCTGGAGGGGCCCGGGGGGCACCCTGACNTGGGGGAC
C
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