EY756882
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756882 vs. ExPASy Swiss-Prot
Match: RS12_HORVU (40S ribosomal protein S12 OS=Hordeum vulgare GN=RPS12 PE=2 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 2.935e-50 Identity = 94/123 (76.42%), Postives = 107/123 (86.99%), Query Frame = 1 Query: 61 LGEAMDLMTALQVVLTKSLAHGGLARGLHEGAKVIEKHAAQLCVLAEDCNQPDYVKLVKALCADHNVSLLTVPSANTLGEWAGLCKIDSYGNATKVEGCSCVVVNDFGEESDGLNVVHQHIKS 429 LGE MDLMTALQ+V+ KS AH GL +GL E AK IEKHAAQLCVLAEDC+QPDYVKLVKALCA+HNV L+TVPSA TLGEWAGLCKID+ G A KV GCSC+VV D+GEES+GLN+V Q++KS Sbjct: 20 LGEPMDLMTALQLVMKKSSAHDGLVKGLREAAKSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGKARKVVGCSCIVVKDYGEESEGLNIVQQYVKS 142
BLAST of EY756882 vs. ExPASy Swiss-Prot
Match: RS122_ARATH (40S ribosomal protein S12-2 OS=Arabidopsis thaliana GN=RPS12C PE=2 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.154e-46 Identity = 87/122 (71.31%), Postives = 103/122 (84.43%), Query Frame = 1 Query: 67 EAMDLMTALQVVLTKSLAHGGLARGLHEGAKVIEKHAAQLCVLAEDCNQPDYVKLVKALCADHNVSLLTVPSANTLGEWAGLCKIDSYGNATKVEGCSCVVVNDFGEESDGLNVVHQHIKSH 432 E MD+ TAL++ + KS A+GG+ RGLHE AK+IEK AQLCVLAEDCNQPDYVKLVKALCADH++ LLTVPSA TLGEWAGLCKIDS GNA KV GCSC+V+ DFGEE+ LN+V +H+ S+ Sbjct: 23 EDMDVSTALELTVRKSRAYGGVVRGLHESAKLIEKRNAQLCVLAEDCNQPDYVKLVKALCADHSIKLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCSCLVIKDFGEETTALNIVKKHLDSN 144
BLAST of EY756882 vs. ExPASy Swiss-Prot
Match: RS121_ARATH (40S ribosomal protein S12-1 OS=Arabidopsis thaliana GN=RPS12A PE=2 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 3.358e-46 Identity = 90/121 (74.38%), Postives = 102/121 (84.30%), Query Frame = 1 Query: 67 EAMDLMTALQVVLTKSLAHGGLARGLHEGAKVIEKHAAQLCVLAEDCNQPDYVKLVKALCADHNVSLLTVPSANTLGEWAGLCKIDSYGNATKVEGCSCVVVNDFGEESDGLNVVHQHIKS 429 E MDLMTAL++ L K+ A+GG+ RGLHE AK+IEK AQL VLAEDCNQPDYVKLVKALCADH V LLTVPSA TLGEWAGLCKIDS GNA KV GCSC+VV DFGEE+ L++V++HI S Sbjct: 23 EDMDLMTALELTLRKARAYGGVVRGLHECAKLIEKRVAQLVVLAEDCNQPDYVKLVKALCADHEVRLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCSCLVVKDFGEETTALSIVNKHIAS 143
BLAST of EY756882 vs. ExPASy Swiss-Prot
Match: RS12_PIG (40S ribosomal protein S12 OS=Sus scrofa GN=RPS12 PE=2 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 4.257e-33 Identity = 66/121 (54.55%), Postives = 85/121 (70.25%), Query Frame = 1 Query: 64 GEAMDLMTALQVVLTKSLAHGGLARGLHEGAKVIEKHAAQLCVLAEDCNQPDYVKLVKALCADHNVSLLTVPSANTLGEWAGLCKIDSYGNATKVEGCSCVVVNDFGEESDGLNVVHQHIK 426 G MD+ TALQ VL +L H GLARG+ E AK ++K A LCVLA +C++P YVKLV+ALCA+H ++L+ V LGEW GLCKID G KV GCSCVVV D+G+ES +V+ ++ K Sbjct: 9 GGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLVEALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129
BLAST of EY756882 vs. ExPASy Swiss-Prot
Match: RS12_HUMAN (40S ribosomal protein S12 OS=Homo sapiens GN=RPS12 PE=1 SV=3) HSP 1 Score: 141.354 bits (355), Expect = 4.257e-33 Identity = 66/121 (54.55%), Postives = 85/121 (70.25%), Query Frame = 1 Query: 64 GEAMDLMTALQVVLTKSLAHGGLARGLHEGAKVIEKHAAQLCVLAEDCNQPDYVKLVKALCADHNVSLLTVPSANTLGEWAGLCKIDSYGNATKVEGCSCVVVNDFGEESDGLNVVHQHIK 426 G MD+ TALQ VL +L H GLARG+ E AK ++K A LCVLA +C++P YVKLV+ALCA+H ++L+ V LGEW GLCKID G KV GCSCVVV D+G+ES +V+ ++ K Sbjct: 9 GGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLVEALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129
BLAST of EY756882 vs. ExPASy Swiss-Prot
Match: RS12_CHICK (40S ribosomal protein S12 OS=Gallus gallus GN=RPS12 PE=1 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 4.257e-33 Identity = 66/121 (54.55%), Postives = 85/121 (70.25%), Query Frame = 1 Query: 64 GEAMDLMTALQVVLTKSLAHGGLARGLHEGAKVIEKHAAQLCVLAEDCNQPDYVKLVKALCADHNVSLLTVPSANTLGEWAGLCKIDSYGNATKVEGCSCVVVNDFGEESDGLNVVHQHIK 426 G MD+ TALQ VL +L H GLARG+ E AK ++K A LCVLA +C++P YVKLV+ALCA+H ++L+ V LGEW GLCKID G KV GCSCVVV D+G+ES +V+ ++ K Sbjct: 9 GGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLVEALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129
BLAST of EY756882 vs. ExPASy Swiss-Prot
Match: RS12_BOVIN (40S ribosomal protein S12 OS=Bos taurus GN=RPS12 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.257e-33 Identity = 66/121 (54.55%), Postives = 85/121 (70.25%), Query Frame = 1 Query: 64 GEAMDLMTALQVVLTKSLAHGGLARGLHEGAKVIEKHAAQLCVLAEDCNQPDYVKLVKALCADHNVSLLTVPSANTLGEWAGLCKIDSYGNATKVEGCSCVVVNDFGEESDGLNVVHQHIK 426 G MD+ TALQ VL +L H GLARG+ E AK ++K A LCVLA +C++P YVKLV+ALCA+H ++L+ V LGEW GLCKID G KV GCSCVVV D+G+ES +V+ ++ K Sbjct: 9 GGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLVEALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129
BLAST of EY756882 vs. ExPASy Swiss-Prot
Match: RS12_CYAPA (40S ribosomal protein S12 OS=Cyanophora paradoxa GN=RPS12 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.113e-32 Identity = 64/118 (54.24%), Postives = 86/118 (72.88%), Query Frame = 1 Query: 73 MDLMTALQVVLTKSLAHGGLARGLHEGAKVIEKHAAQLCVLAEDCNQPDYVKLVKALCADHNVSLLTVPSANTLGEWAGLCKIDSYGNATKVEGCSCVVVNDFGEESDGLNVVHQHIK 426 MD+MTAL+ VL K++ GL RGLHE AK +++ +AQLCVLA + N+P Y +LV+ALCA+H ++L+ VP LGEW GLCKID G A KV GCSC V+ FGEES+ V+ +++K Sbjct: 17 MDVMTALKEVLKKAMVVDGLKRGLHECAKALDQRSAQLCVLAANVNEPAYTRLVEALCAEHGINLIKVPENKQLGEWVGLCKIDKEGKARKVVGCSCAVITKFGEESEARQVLMEYLK 134
BLAST of EY756882 vs. ExPASy Swiss-Prot
Match: RS12_XENLA (40S ribosomal protein S12 OS=Xenopus laevis GN=rps12 PE=2 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 6.148e-32 Identity = 65/121 (53.72%), Postives = 84/121 (69.42%), Query Frame = 1 Query: 64 GEAMDLMTALQVVLTKSLAHGGLARGLHEGAKVIEKHAAQLCVLAEDCNQPDYVKLVKALCADHNVSLLTVPSANTLGEWAGLCKIDSYGNATKVEGCSCVVVNDFGEESDGLNVVHQHIK 426 G MD+ TALQ VL +L H GLARG+ E AK ++K A LCVLA +C++P YVKLV+ALCA+ ++L+ V LGEW GLCKID G KV GCSCVVV D+G+ES +V+ ++ K Sbjct: 9 GGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLVEALCAEPQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129
BLAST of EY756882 vs. ExPASy Swiss-Prot
Match: RS12_RAT (40S ribosomal protein S12 OS=Rattus norvegicus GN=Rps12 PE=1 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 6.148e-32 Identity = 65/121 (53.72%), Postives = 84/121 (69.42%), Query Frame = 1 Query: 64 GEAMDLMTALQVVLTKSLAHGGLARGLHEGAKVIEKHAAQLCVLAEDCNQPDYVKLVKALCADHNVSLLTVPSANTLGEWAGLCKIDSYGNATKVEGCSCVVVNDFGEESDGLNVVHQHIK 426 G MD+ TALQ VL +L H GLARG+ E AK ++K A LCVLA +C++P YVKLV+AL A+H ++L+ V LGEW GLCKID G KV GCSCVVV D+G+ES +V+ ++ K Sbjct: 9 GGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLVEALLAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129 The following BLAST results are available for this feature:
BLAST of EY756882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756882 ID=EY756882; Name=EY756882; organism=Citrus sinensis; type=EST; length=674bpback to top |