EY756813

Overview
NameEY756813
Unique NameEY756813
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756813 vs. ExPASy Swiss-Prot
Match: UCRI1_TOBAC (Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment) OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 396.356 bits (1017), Expect = 1.143e-109
Identity = 187/210 (89.05%), Postives = 202/210 (96.19%), Query Frame = 3
Query:   12 GFSSESLTPRNEESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDEKR 641
            GFSS S++P ++  LVP +P TVAA+KNPTSKIVYDE+NHERYPPGDPSKRAFAYFVLTGGRFVYASL+RLLILKFVLSMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKPVFIRRRTE+DI LANSVDLGSLRDPQQDAERVKNPEWLVV+GVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVP+YSFL+E +
Sbjct:   45 GFSSNSVSPAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLMRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDISLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENK 254          
BLAST of EY756813 vs. ExPASy Swiss-Prot
Match: UCRI3_TOBAC (Cytochrome b-c1 complex subunit Rieske-3, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 392.504 bits (1007), Expect = 1.651e-108
Identity = 185/210 (88.10%), Postives = 201/210 (95.71%), Query Frame = 3
Query:   12 GFSSESLTPRNEESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDEKR 641
            GFSS S++P ++  LV  +PATVAA+KNP+SKIVYD+ NHERYPPGDPSKRAFAYFVLTGGRFVYASL+RLLILKFVLSMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKPVFIRRRTEEDI LANSVDLGSLRDPQQDAERVKNPEWLVV+GVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVP+YSF++E +
Sbjct:   55 GFSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFMEENK 264          
BLAST of EY756813 vs. ExPASy Swiss-Prot
Match: UCRI4_TOBAC (Cytochrome b-c1 complex subunit Rieske-4, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 391.734 bits (1005), Expect = 2.816e-108
Identity = 185/210 (88.10%), Postives = 201/210 (95.71%), Query Frame = 3
Query:   12 GFSSESLTPRNEESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDEKR 641
            GFSS S++  ++  LVP +P TVAA+KNPTSKIVYDE+NHERYPPGDPSKRAFAYFVLTGGRFVYASL+RLLILKFVLSMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKPVFIRRRTE+DI LANSVDLGSLRDPQQDAERVK+PEWLVV+GVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVP+YSFL+E +
Sbjct:   23 GFSSNSVSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDINLANSVDLGSLRDPQQDAERVKSPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENK 232          
BLAST of EY756813 vs. ExPASy Swiss-Prot
Match: UCRI2_TOBAC (Cytochrome b-c1 complex subunit Rieske-2, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 391.734 bits (1005), Expect = 2.816e-108
Identity = 185/210 (88.10%), Postives = 201/210 (95.71%), Query Frame = 3
Query:   12 GFSSESLTPRNEESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDEKR 641
            GFSS S++  ++  LVP +P TVAA+KNPTSKIVYDE+NHERYPPGDPSKRAFAYFVLTGGRFVYASL+RLLILKFVLSMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKPVFIRRRTE+DI LANSVDLGSLRDPQQDAERVK+PEWLVV+GVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVP+YSFL+E +
Sbjct:   59 GFSSNSVSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDINLANSVDLGSLRDPQQDAERVKSPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENK 268          
BLAST of EY756813 vs. ExPASy Swiss-Prot
Match: UCRI5_TOBAC (Cytochrome b-c1 complex subunit Rieske-5, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 391.349 bits (1004), Expect = 3.677e-108
Identity = 184/210 (87.62%), Postives = 201/210 (95.71%), Query Frame = 3
Query:   12 GFSSESLTPRNEESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDEKR 641
            GFSS S++P ++  LV  +PATVAA+KNP+SKIVYD+ NHERYPPGDPSKRAFAYFVLTGGRFVYASL+RLLILKFVLSMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT+EDI LANSVDLGSLRDPQQDAERVKNPEWLVV+GVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVP+YSF++E +
Sbjct:   55 GFSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTDEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFMEENK 264          
BLAST of EY756813 vs. ExPASy Swiss-Prot
Match: UCRI_SOLTU (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Solanum tuberosum GN=FES1 PE=1 SV=1)

HSP 1 Score: 390.193 bits (1001), Expect = 8.192e-108
Identity = 185/210 (88.10%), Postives = 201/210 (95.71%), Query Frame = 3
Query:   12 GFSSESLTPRNEESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDEKR 641
            GFSS S++P ++  LV  +PATVAA+KNP+SKIVYD+ NHERYPPGDPSKRAFAYFVLTGGRFVYAS +RLLILKFVLSMSASKDVLA+ASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT++DIKLANSVDLG+LRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVP+YSFL+E +
Sbjct:   52 GFSSNSVSPAHQLGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGGRFVYASSVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTDDDIKLANSVDLGTLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENK 261          
BLAST of EY756813 vs. ExPASy Swiss-Prot
Match: UCRI_MAIZE (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Zea mays PE=2 SV=1)

HSP 1 Score: 382.104 bits (980), Expect = 2.231e-105
Identity = 179/211 (84.83%), Postives = 201/211 (95.26%), Query Frame = 3
Query:   12 GFSS-ESLTPRNEESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDEKR 641
            GFSS E++ PRN+++ +  +PATVAAVKNP  K+VYDEYNHERYPPGDPSKRAFAYFVL+GGRF+YASL+RLL+LKFVLSMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKPVFIRRRTE+DIKLANSVD+ SLR P+QDAERVKNPEWLVV+GVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAP+NLEVP+YSFL+E +
Sbjct:   59 GFSSTETVVPRNQDAGLADLPATVAAVKNPNPKVVYDEYNHERYPPGDPSKRAFAYFVLSGGRFIYASLLRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVDVASLRHPEQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPTYSFLEENK 269          
BLAST of EY756813 vs. ExPASy Swiss-Prot
Match: UCRI_YEAST (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Saccharomyces cerevisiae GN=RIP1 PE=1 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 3.057e-54
Identity = 93/159 (58.49%), Postives = 127/159 (79.87%), Query Frame = 3
Query:  162 RAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDEK 638
            R++AYF++     + ++  +  +  F+ SM+A+ DVLAMA +EV+L++I  G  V VKW+GKPVFIR RT  +I+ ANSVD+ +L+DPQ DA+RVK+P+WL+++G+CTHLGC+P+  AGDFGGWFCPCHGSHYDISGRIRKGPAP NLE+P+Y F  +K
Sbjct:   53 RSYAYFMVGAMGLLSSAGAKSTVETFISSMTATADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHRTPHEIQEANSVDMSALKDPQTDADRVKDPQWLIMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPAYEFDGDK 211          
BLAST of EY756813 vs. ExPASy Swiss-Prot
Match: UCRI_NEUCR (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Neurospora crassa GN=NCU06606 PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 5.215e-54
Identity = 96/156 (61.54%), Postives = 123/156 (78.85%), Query Frame = 3
Query:  168 FAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDE 635
            F+YF++     + A+  +  I +F+ +MSAS DVLAMA +EVDL++I  G  V +KWRGKPVFIR RT  +I+ AN V++ +LRDP+ DA+RVK PEWLV++GVCTHLGC+P+  AGD+GGWFCPCHGSHYDISGRIRKGPAP NLE+P Y F +E
Sbjct:   70 FSYFMVGTMGAITAAGAKSTIQEFLKNMSASADVLAMAKVEVDLNAIPEGKNVIIKWRGKPVFIRHRTPAEIEEANKVNVATLRDPETDADRVKKPEWLVMLGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRIRKGPAPLNLEIPLYEFPEE 225          
BLAST of EY756813 vs. ExPASy Swiss-Prot
Match: UCRI_CHICK (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Gallus gallus GN=UQCRFS1 PE=1 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.982e-53
Identity = 103/222 (46.40%), Postives = 140/222 (63.06%), Query Frame = 3
Query:    6 RPGFSSESLTPRN-EESLVPGV----PATVAAVKNPTSKIVYDEYNHERYPPGDPS-------KRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDE 635
            RP    ES++ R+    LV G+    PA+V  V N  +   +  Y  E       S       ++ F+Y V        A   + ++ +F+ S+SAS DVLA++ +E+ LS I  G  V  KWRGKP+F+R RT+ +I     VD+  LRDPQ D +RVK PEW+++VGVCTHLGC+P+ N+GDFGG++CPCHGSHYD SGRIRKGPAPYNLEVP+Y F+ +
Sbjct:   45 RPLLCRESMSGRSARRDLVAGISLNAPASVRYVHNDVTVPDFSAYRREDVMDATTSSQTSSEDRKGFSYLVTATACVATAYAAKNVVTQFISSLSASADVLALSKIEIKLSDIPEGKNVAFKWRGKPLFVRHRTQAEINQEAEVDVSKLRDPQHDLDRVKKPEWVILVGVCTHLGCVPIANSGDFGGYYCPCHGSHYDASGRIRKGPAPYNLEVPTYQFVGD 266          
The following BLAST results are available for this feature:
BLAST of EY756813 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
UCRI1_TOBAC1.143e-10989.05Cytochrome b-c1 complex subunit Rieske-1, mitochon... [more]
UCRI3_TOBAC1.651e-10888.10Cytochrome b-c1 complex subunit Rieske-3, mitochon... [more]
UCRI4_TOBAC2.816e-10888.10Cytochrome b-c1 complex subunit Rieske-4, mitochon... [more]
UCRI2_TOBAC2.816e-10888.10Cytochrome b-c1 complex subunit Rieske-2, mitochon... [more]
UCRI5_TOBAC3.677e-10887.62Cytochrome b-c1 complex subunit Rieske-5, mitochon... [more]
UCRI_SOLTU8.192e-10888.10Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI_MAIZE2.231e-10584.83Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI_YEAST3.057e-5458.49Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI_NEUCR5.215e-5461.54Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI_CHICK1.982e-5346.40Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-013-H12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756813 ID=EY756813; Name=EY756813; organism=Citrus sinensis; type=EST; length=877bp
CCACGCGTCCGGGTTTTTCTTCTGAGTCACTGACACCAAGAAATGAAGAA
AGCCTGGTTCCAGGTGTTCCAGCAACAGTGGCAGCTGTTAAGAATCCCAC
TTCTAAGATAGTATATGATGAATACAATCATGAACGTTATCCTCCAGGTG
ACCCCAGCAAGCGGGCATTTGCCTACTTTGTCCTGACTGGTGGTAGGTTT
GTGTATGCTTCACTCATCCGTCTACTTATCCTTAAATTTGTACTGAGCAT
GTCAGCGAGTAAGGATGTTCTTGCTATGGCCTCTCTTGAGGTTGATCTGT
CCAGCATTGAGCCAGGCAGCACAGTGACTGTTAAGTGGCGGGGCAAGCCA
GTTTTCATCAGACGTCGGACTGAGGAAGATATCAAGCTGGCCAACAGTGT
TGATTTGGGATCTCTTCGTGATCCTCAGCAAGACGCTGAGAGGGTTAAAA
ACCCGGAGTGGCTTGTAGTTGTTGGGGTCTGCACACATCTTGGTTGCATT
CCTTTGCCAAATGCTGGTGACTTTGGTGGATGGTTTTGCCCTTGCCATGG
TTCTCATTACGATATCTCTGGCAGGATTCGCAAGGGACCAGCACCATACA
ATTTGGAAGTACCCTCTTACTCCTTCTTGGATGAGAAAAGATGCTCATTG
GTTGATAAGTGTGACGTCCTGTACCGGTGATCCATGGTTATTTGGGATCT
CATTTTTTTTTAAAATATTTTATCAGATAATGTCGAAGATAATGCCTATC
TTTGTGTCTTGCCACCCTTTCATTTGGGTGGGATACTGTAACTCAAAAAT
AAGTGCCTGGTTTTGACACATGTCTTTTAACTAAATTTCAAAAAAAAAAA
AAAAAAAAAAAAGGGCGCCGCTCTAAG
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