EY756696

Overview
NameEY756696
Unique NameEY756696
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756696 vs. ExPASy Swiss-Prot
Match: CCD61_ARATH (Putative cyclin-D6-1 OS=Arabidopsis thaliana GN=CYCD6-1 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 6.901e-37
Identity = 58/138 (42.03%), Postives = 77/138 (55.80%), Query Frame = 3
Query:  252 ELLILDALNWRMRSITPFSFLCFFISLFEPKDPP---LTQALKDRATDIIFRAHSEIKLLEFRPXXXXXXXXXXXXYELFPLQFPSFKTSILSSDYVNKEDLSKCYDTVQEMVEMDGCESILDTLSSSRTQFSVVDXQ 656
            E +IL AL WRMRS+TPFSFL FFISLFE K+     L  +LK + +D+ F    +I  LEF+P            +EL PLQFP F   I    YVNK++L +CY  +QE   + G     +   S+ T  +V+D Q
Sbjct:  142 ENVILGALKWRMRSVTPFSFLAFFISLFELKEEDPLLLKHSLKSQTSDLTFSLQHDISFLEFKPSVIAGAALLFASFELCPLQFPCFSNRINQCTYVNKDELMECYKAIQERDIIVG-----ENEGSTETAVNVLDQQ 274          

HSP 2 Score: 73.9442 bits (180), Expect = 6.901e-37
Identity = 33/69 (47.83%), Postives = 51/69 (73.91%), Query Frame = 2
Query:   44 EPFISYLAVTYLDRFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFPLSKFQGDQKLIFDAQTIHRM 250
            +P ++YLAV YLDRF+S +++PQ KPW+L+L+++SC+SL+AKM+     +S    + +  FDAQ I RM
Sbjct:   74 DPSLTYLAVNYLDRFLSSEDMPQSKPWILKLISLSCVSLSAKMRKPDMSVSDLPVEGE-FFDAQMIERM 141          
BLAST of EY756696 vs. ExPASy Swiss-Prot
Match: CCD61_ORYSJ (Cyclin-D6-1 OS=Oryza sativa subsp. japonica GN=CYCD6-1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 2.476e-22
Identity = 36/104 (34.62%), Postives = 55/104 (52.88%), Query Frame = 3
Query:  252 ELLILDALNWRMRSITPFSFLCFFISLF--EPKDPPLTQALKDRATDIIFRAHSEIKLLEFRPXXXXXXXXXXXXYELFPLQFPSFKTSILSSDYVNKEDLSKC 557
            E ++L+AL WR RS+TP +FL FF+S    +P+ P L  A+K RA D++ R   E+K+ EF P             E+       F+  + +  +VN E L +C
Sbjct:  146 EQMVLNALEWRTRSVTPLAFLGFFLSACFPQPRHPALLDAIKARAVDLLLRVQPEVKMAEFSPSVAAAAALLAAAGEVAGAHLLGFEAGVAACPFVNSEKLREC 249          

HSP 2 Score: 55.8398 bits (133), Expect = 2.476e-22
Identity = 27/70 (38.57%), Postives = 46/70 (65.71%), Query Frame = 2
Query:   47 PFISYLAVTYLDRFISRQEIP-QGKPWVLRLLAVSCISLAAKMKN-THFPLSKFQGDQKLIFDAQTIHRM 250
            P ++YLA+ Y+DR++S++++  +  PW  RLLA+SC++LAAKM+       +  Q  ++ +FD   I RM
Sbjct:   76 PRVAYLALNYVDRYLSKRQLACERNPWAPRLLAISCLTLAAKMQRAAAISAADIQRGEEFMFDEAKIQRM 145          
BLAST of EY756696 vs. ExPASy Swiss-Prot
Match: CCD41_ARATH (Cyclin-D4-1 OS=Arabidopsis thaliana GN=CYCD4-1 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.563e-21
Identity = 33/72 (45.83%), Postives = 50/72 (69.44%), Query Frame = 2
Query:   41 FEPFISYLAVTYLDRFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFP--LSKFQGDQKLIFDAQTIHRM 250
            F P    LA+ YLDRF+S  ++P GK W+L+LLAV+C+SLAAK++ T  P  +    GD + +F+A+++ RM
Sbjct:   94 FGPLCFCLAMNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDLQVGDPQFVFEAKSVQRM 165          

HSP 2 Score: 53.9138 bits (128), Expect = 1.563e-21
Identity = 38/122 (31.15%), Postives = 56/122 (45.90%), Query Frame = 3
Query:  234 KRFTEWELLILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDIIFRAHSEIKLLEFRPXXXXXXXXXXXXYELFPLQFPSFKTSILSSDYVNKEDLSKCYDTVQEMVEMDGCE 599
            K     ELL+L+ L WR+R+ITP S++ +F+      D   +  L  R+  +I      I  LEFRP             EL  + F +   S L S  + KE + K    + EM+E DG +
Sbjct:  160 KSVQRMELLVLNKLKWRLRAITPCSYIRYFLRKMSKCDQEPSNTLISRSLQVIASTTKGIDFLEFRPSEVAAAVALSVSGELQRVHFDNSSFSPLFS-LLQKERVKK----IGEMIESDGSD 276          
BLAST of EY756696 vs. ExPASy Swiss-Prot
Match: CCD42_ORYSJ (Cyclin-D4-2 OS=Oryza sativa subsp. japonica GN=CYCD4-2 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 7.539e-21
Identity = 35/73 (47.95%), Postives = 53/73 (72.60%), Query Frame = 2
Query:   38 NFEPFISYLAVTYLDRFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFP--LSKFQGDQKLIFDAQTIHRM 250
            NF    +YLAV YLDRF+S+ E+P+G+ W+ +LL+V+C+S+AAKM+ T  P  L    G+ + +F+ +TIHRM
Sbjct:  125 NFSSVTAYLAVNYLDRFLSQYELPEGRDWMTQLLSVACLSIAAKMEETVVPQCLDLQIGEPRFLFEVETIHRM 197          

HSP 2 Score: 45.4394 bits (106), Expect = 7.539e-21
Identity = 25/62 (40.32%), Postives = 39/62 (62.90%), Query Frame = 3
Query:  252 ELLILDALNWRMRSITPFSFLCFFI-SLFEPKDPPLTQALKDRATDIIFRAHSEIKLLEFRP 434
            ELL+L  LNWRM+++TPFS++ +F+  L      P +  L  R++++I R  +    LEFRP
Sbjct:  198 ELLVLTNLNWRMQAVTPFSYIDYFLRKLNSGNAAPRSWLL--RSSELILRIAAGTGFLEFRP 257          
BLAST of EY756696 vs. ExPASy Swiss-Prot
Match: CCD41_ORYSJ (Cyclin-D4-1 OS=Oryza sativa subsp. japonica GN=CYCD4-1 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 9.822e-21
Identity = 36/73 (49.32%), Postives = 52/73 (71.23%), Query Frame = 2
Query:   38 NFEPFISYLAVTYLDRFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFP--LSKFQGDQKLIFDAQTIHRM 250
            +F P  + LAV YLDRF+S  ++P GK W+ +LLAV+C+SLAAKM+ T  P  L    G+++ +F+A+TI RM
Sbjct:  118 SFAPLTACLAVNYLDRFLSLYQLPDGKDWMTQLLAVACLSLAAKMEETDVPQSLDLQVGEERYVFEAKTIQRM 190          

HSP 2 Score: 46.9802 bits (110), Expect = 9.822e-21
Identity = 32/115 (27.83%), Postives = 53/115 (46.09%), Query Frame = 3
Query:  234 KRFTEWELLILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDIIFRAHSEIKLLEFRPXXXXXXXXXXXXYELFPLQFPSFKTSILSSDYVNKEDLSKCYDTVQEM 578
            K     ELL+L  L WRM+++TPFS++ +F+      DPP  ++    ++++I       + L FRP             E    +  +F        +VNKE +S C + +Q M
Sbjct:  185 KTIQRMELLVLSTLKWRMQAVTPFSYVDYFLRELNGGDPPSGRSAL-LSSELILCIARGTECLGFRPSEIAAAVAAAVVGE----EHAAF-------SHVNKERMSHCQEVIQAM 287          
BLAST of EY756696 vs. ExPASy Swiss-Prot
Match: CCD22_ORYSJ (Cyclin-D2-2 OS=Oryza sativa subsp. japonica GN=CYCD2-2 PE=2 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 3.657e-20
Identity = 34/73 (46.58%), Postives = 46/73 (63.01%), Query Frame = 2
Query:   38 NFEPFISYLAVTYLDRFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFPLSKFQG--DQKLIFDAQTIHRM 250
            NF P   YLAV YLDRF+S   +P  + W+ +LL+VSC+SLA KM+ T  PL       D + +F+A+ I RM
Sbjct:  110 NFGPLSLYLAVNYLDRFLSSFNLPHDESWMQQLLSVSCLSLATKMEETVVPLPMDLQVFDAEYVFEARHIKRM 182          

HSP 2 Score: 55.8398 bits (133), Expect = 3.657e-20
Identity = 36/137 (26.28%), Postives = 65/137 (47.45%), Query Frame = 3
Query:  252 ELLILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDIIFRAHSEIKLLEFRPXXXXXXXXXXXXYELFPLQFPSFKTSILSSDY-VNKEDLSKCYDTVQEMVEMDGCESILDTLSSSRTQFSVVDXQC 659
            EL+++  L WR++++TPFSF+ +F+  F    PP +  L    +D+      + + L FRP             E    QF  F +++  S+  VNKE + +CY+ + E   +    +   + S   +  +V+D  C
Sbjct:  183 ELIVMKTLKWRLQAVTPFSFIGYFLDKFNEGKPP-SYTLASWCSDLTVGTLKDSRFLSFRPSEIAAAVVLAVLAE---NQFLVFNSALGESEIPVNKEMVMRCYELMVEKALVKKIRNSNASSSVPHSPITVLDAAC 315          
BLAST of EY756696 vs. ExPASy Swiss-Prot
Match: CCD11_ARATH (Cyclin-D1-1 OS=Arabidopsis thaliana GN=CYCD1-1 PE=1 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 1.363e-19
Identity = 36/78 (46.15%), Postives = 52/78 (66.67%), Query Frame = 2
Query:   23 IQFACNFEPFISYLAVTYLDRFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFP-LSKFQ-GDQKLIFDAQTIHRM 250
            +Q   NF+P  +YLAV Y+DRF+  + +P+   W ++LLAV+C+SLAAKM+    P L  FQ    K +F+A+TI RM
Sbjct:   92 VQAYYNFQPLTAYLAVNYMDRFLYARRLPETSGWPMQLLAVACLSLAAKMEEILVPSLFDFQVAGVKYLFEAKTIKRM 169          

HSP 2 Score: 49.2914 bits (116), Expect = 1.363e-19
Identity = 35/117 (29.91%), Postives = 52/117 (44.44%), Query Frame = 3
Query:  234 KRFTEWELLILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDIIFRAHSEIKLLEFRPXXXXXXXXXXXXYELFPLQ--FPSFKTSILSSDYVNKEDLSKCYDTVQEM 578
            K     ELL+L  L+WR+RS+TPF F+ FF    +P    L   +   AT+II     E   LE+ P             EL  L       ++     D ++KE + +CY  ++ M
Sbjct:  164 KTIKRMELLVLSVLDWRLRSVTPFDFISFFAYKIDPSGTFLGFFI-SHATEIILSNIKEASFLEYWPSSIAAAAILCVANELPSLSSVVNPHESPETWCDGLSKEKIVRCYRLMKAM 279          
BLAST of EY756696 vs. ExPASy Swiss-Prot
Match: CCD42_ARATH (Cyclin-D4-2 OS=Arabidopsis thaliana GN=CYCD4-2 PE=1 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 1.367e-19
Identity = 33/72 (45.83%), Postives = 50/72 (69.44%), Query Frame = 2
Query:   41 FEPFISYLAVTYLDRFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFP-LSKFQ-GDQKLIFDAQTIHRM 250
            F P    LA+ YLDRF+S  ++P GK W ++LLAV+C+SLAAK++ T+ P L + Q G    +F+A+++ RM
Sbjct:   85 FGPLCICLAMNYLDRFLSVHDLPSGKAWTVQLLAVACLSLAAKIEETNVPELMQLQVGAPMFVFEAKSVQRM 156          

HSP 2 Score: 51.6026 bits (122), Expect = 1.367e-19
Identity = 42/135 (31.11%), Postives = 62/135 (45.93%), Query Frame = 3
Query:  234 KRFTEWELLILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDIIFRAHSEIKLLEFRPXXXXXXXXXXXXYELFPLQFPSFKTSILSSDYVNKEDLSKCYDTVQEMVEMDGCESILDTLSSSRTQF 638
            K     ELL+L+ L WR+R++TP S++ +F+S     D      L  R+  +I      I  LEFR              E F  +F SF +S  S   + KE + K    + EM+E DG  S   T +++  QF
Sbjct:  151 KSVQRMELLVLNVLRWRLRAVTPCSYVRYFLSKINGYDQEPHSRLVTRSLQVIASTTKGIDFLEFRASEIAAAVALSVSGEHFD-KF-SFSSSFSS---LEKERVKK----IGEMIERDGSSSSSQTPNNTVLQF 276          
BLAST of EY756696 vs. ExPASy Swiss-Prot
Match: CCD21_ORYSJ (Cyclin-D2-1 OS=Oryza sativa subsp. japonica GN=CYCD2-1 PE=3 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 1.777e-19
Identity = 34/72 (47.22%), Postives = 51/72 (70.83%), Query Frame = 2
Query:   41 FEPFISYLAVTYLDRFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFP-LSKFQGD-QKLIFDAQTIHRM 250
            F P  +YLAV Y+DRF+S + +P+G+ W ++LLAV+C+SLAAKM+ T  P L   Q +  + +F+ +TI RM
Sbjct:   98 FLPLTAYLAVNYMDRFLSLRHLPEGQGWAMQLLAVACLSLAAKMEETLVPSLLDLQVECSRYVFEPRTICRM 169          

HSP 2 Score: 50.447 bits (119), Expect = 1.777e-19
Identity = 33/110 (30.00%), Postives = 54/110 (49.09%), Query Frame = 3
Query:  252 ELLILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDIIFRAHSEIKLLEFRPXXXXXXXXXXXXYELFPLQFPSFKTSILSSDYVNKEDLSKCYDTVQEMV 581
            E LIL ALNWR+RS+TPF+F+ FF             A K  +  ++  A+S+I+ L+  P             E   L F + + ++     + +E +S CY  +Q++V
Sbjct:  170 EFLILTALNWRLRSVTPFTFIDFF-------------ACKHISNAMVQNANSDIQFLDHCPSSMAAAAVLCATGETPSLAFVNPELAVNWCIGLAEEGISSCYQLMQQLV 266          
BLAST of EY756696 vs. ExPASy Swiss-Prot
Match: CCD12_ORYSJ (Cyclin-D1-2 OS=Oryza sativa subsp. japonica GN=CYCD1-2 PE=3 SV=2)

HSP 1 Score: 63.5438 bits (153), Expect = 2.994e-19
Identity = 34/70 (48.57%), Postives = 47/70 (67.14%), Query Frame = 2
Query:   47 PFISYLAVTYLDRFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFP--LSKFQGDQKLIFDAQTIHRM 250
            P  +YLAV+Y+DRF+S   +P G  W ++LLAV+C+SLAAKM+ T  P  L     D + IF+ +TI RM
Sbjct:  134 PVTAYLAVSYMDRFLSLHRLP-GNGWAMQLLAVTCLSLAAKMEETLVPSILDLQMEDARYIFEHRTIFRM 202          

HSP 2 Score: 53.1434 bits (126), Expect = 2.994e-19
Identity = 38/139 (27.34%), Postives = 68/139 (48.92%), Query Frame = 3
Query:  231 HKRFTEWELLILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDIIFRAHSEIKLLEFRPXXXXXXXXXXXXYELFPLQFPSFKTSILSSDYV---NKEDLSKCYDTVQEMVEMD--GCESILDTLSSSRT 632
            H+     ELL+LDAL+WR+RSITPF+F+  F    +P    + + L  +AT +      + + L+  P             E+  +Q  S     L S  +   ++E + +CY  +Q+++  +  G ES   T++++ T
Sbjct:  196 HRTIFRMELLVLDALDWRLRSITPFTFMYLFADKVDPNGKHIRE-LIHQATQVTLATIHDTEFLDHCPSSIAAAAVLCASSEI--MQLVSIDHGTLVSWRIIGLDEEAIIRCYRLMQQLISSNNVGRESTEITMATTTT 331          
The following BLAST results are available for this feature:
BLAST of EY756696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
CCD61_ARATH6.901e-3742.03Putative cyclin-D6-1 OS=Arabidopsis thaliana GN=CY... [more]
CCD61_ORYSJ2.476e-2234.62Cyclin-D6-1 OS=Oryza sativa subsp. japonica GN=CYC... [more]
CCD41_ARATH1.563e-2145.83Cyclin-D4-1 OS=Arabidopsis thaliana GN=CYCD4-1 PE=... [more]
CCD42_ORYSJ7.539e-2147.95Cyclin-D4-2 OS=Oryza sativa subsp. japonica GN=CYC... [more]
CCD41_ORYSJ9.822e-2149.32Cyclin-D4-1 OS=Oryza sativa subsp. japonica GN=CYC... [more]
CCD22_ORYSJ3.657e-2046.58Cyclin-D2-2 OS=Oryza sativa subsp. japonica GN=CYC... [more]
CCD11_ARATH1.363e-1946.15Cyclin-D1-1 OS=Arabidopsis thaliana GN=CYCD1-1 PE=... [more]
CCD42_ARATH1.367e-1945.83Cyclin-D4-2 OS=Arabidopsis thaliana GN=CYCD4-2 PE=... [more]
CCD21_ORYSJ1.777e-1947.22Cyclin-D2-1 OS=Oryza sativa subsp. japonica GN=CYC... [more]
CCD12_ORYSJ2.994e-1948.57Cyclin-D1-2 OS=Oryza sativa subsp. japonica GN=CYC... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-011-F06-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756696 ID=EY756696; Name=EY756696; organism=Citrus sinensis; type=EST; length=890bp
CCACGCGTCCGCTCATTTTACGATACAATTTGCCTGCAATTTTGAGCCCT
TCATTTCCTACCTAGCTGTTACTTACTTGGACCGGTTCATCTCTCGGCAA
GAAATTCCGCAAGGAAAGCCATGGGTTCTAAGGCTTCTTGCGGTATCTTG
CATTTCTCTAGCTGCAAAGATGAAGAACACCCACTTCCCCCTCTCTAAGT
TCCAGGGTGACCAAAAGCTCATCTTCGATGCACAAACGATTCACCGAATG
GGAGCTTCTCATTCTTGATGCATTAAATTGGAGAATGAGATCAATAACAC
CTTTCTCATTTCTCTGTTTCTTTATTTCTCTATTTGAGCCGAAAGATCCT
CCATTGACACAAGCTCTCAAAGATCGAGCTACAGATATCATCTTCAGAGC
TCATAGTGAAATCAAGTTACTAGAGTTCAGGCCATCAGTAATTGCGGCAT
CAGCAGTTCTTCTGTCATCATATGAACTGTTCCCATTGCAGTTCCCTTCT
TTCAAGACTTCAATTTTAAGTAGTGACTATGTAAATAAAGAGGACCTGTC
AAAATGCTATGATACAGTGCAAGAAATGGTGGAAATGGACGGCTGTGAGT
CCATTTTAGATACACTGTCAAGCTCAAGAACTCAATTTAGTGTGGTGGAT
TANCAATGCACGAAATCAGAAAGCCAACAAATCACGAATAGTAGCATCAC
AACTACCACTATGATGCCAGAAAAGGAGAGAAATCAGCGACGCAAAATGA
ATGGGTTTTGCAGGGAAGGCGATTCCAGCTTTCTCGATTCAAAATTGTTG
AATACCTGAAAGACAATGAAATGGGCCGAATTGCACCACACATGGCAACG
TCTAAAGAAAAAGGAAAAAAAAGGGACCGATGGCCCCGAT
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