EY756679

Overview
NameEY756679
Unique NameEY756679
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length874
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756679 vs. ExPASy Swiss-Prot
Match: EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana GN=ERF112 PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 6.673e-14
Identity = 24/34 (70.59%), Postives = 28/34 (82.35%), Query Frame = 2
Query:   59 RGILLRPWGKWAAELRDPYKAVRVWLGTFPQAKK 160
            RG+  RPWGKWAAE+RDP KA RVWLGTF  A++
Sbjct:   71 RGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEE 104          

HSP 2 Score: 37.7354 bits (86), Expect = 6.673e-14
Identity = 25/65 (38.46%), Postives = 30/65 (46.15%), Query Frame = 1
Query:  142 FPTGEETARAYDEAAQRIGGYKGNLNFGLXXXXXXXXXXNRRCMPSPEVTPPRFETIGTPPAPAP 336
            F T EE A AYD+AA    G+K  LNF              +  PSP  +  R   I TPP+P P
Sbjct:   99 FDTAEEAALAYDKAAFEFRGHKAKLNF-----PEHIRVNPTQLYPSPATSHDRI--IVTPPSPPP 156          
BLAST of EY756679 vs. ExPASy Swiss-Prot
Match: ABR1_ARATH (Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana GN=ABR1 PE=2 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 3.148e-13
Identity = 24/33 (72.73%), Postives = 28/33 (84.85%), Query Frame = 2
Query:   59 RGILLRPWGKWAAELRDPYKAVRVWLGTFPQAK 157
            RG+  RPWGKWAAE+RDP+KA RVWLGTF  A+
Sbjct:  186 RGVRQRPWGKWAAEIRDPFKAARVWLGTFDNAE 218          

HSP 2 Score: 33.4982 bits (75), Expect = 3.148e-13
Identity = 16/27 (59.26%), Postives = 16/27 (59.26%), Query Frame = 1
Query:  142 FPTGEETARAYDEAAQRIGGYKGNLNF 222
            F   E  ARAYDEAA R  G K  LNF
Sbjct:  214 FDNAESAARAYDEAALRFRGNKAKLNF 240          
BLAST of EY756679 vs. ExPASy Swiss-Prot
Match: EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF110 PE=2 SV=2)

HSP 1 Score: 58.5362 bits (140), Expect = 4.165e-13
Identity = 23/33 (69.70%), Postives = 28/33 (84.85%), Query Frame = 2
Query:   59 RGILLRPWGKWAAELRDPYKAVRVWLGTFPQAK 157
            RG+  RPWGKWAAE+RDP++A RVWLGTF  A+
Sbjct:   78 RGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAE 110          

HSP 2 Score: 35.039 bits (79), Expect = 4.165e-13
Identity = 17/27 (62.96%), Postives = 17/27 (62.96%), Query Frame = 1
Query:  142 FPTGEETARAYDEAAQRIGGYKGNLNF 222
            F T E  ARAYDEAA R  G K  LNF
Sbjct:  106 FDTAEAAARAYDEAALRFRGNKAKLNF 132          
BLAST of EY756679 vs. ExPASy Swiss-Prot
Match: RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana GN=RAP2-6 PE=2 SV=2)

HSP 1 Score: 59.6918 bits (143), Expect = 9.176e-13
Identity = 24/33 (72.73%), Postives = 28/33 (84.85%), Query Frame = 2
Query:   59 RGILLRPWGKWAAELRDPYKAVRVWLGTFPQAK 157
            RG+  RPWGKWAAE+RDP+KA RVWLGTF  A+
Sbjct:   62 RGVRQRPWGKWAAEIRDPHKATRVWLGTFETAE 94          

HSP 2 Score: 32.7278 bits (73), Expect = 9.176e-13
Identity = 16/27 (59.26%), Postives = 16/27 (59.26%), Query Frame = 1
Query:  142 FPTGEETARAYDEAAQRIGGYKGNLNF 222
            F T E  ARAYD AA R  G K  LNF
Sbjct:   90 FETAEAAARAYDAAALRFRGSKAKLNF 116          
BLAST of EY756679 vs. ExPASy Swiss-Prot
Match: EF114_ARATH (Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana GN=ERF114 PE=2 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 1.991e-12
Identity = 26/40 (65.00%), Postives = 30/40 (75.00%), Query Frame = 2
Query:   38 ELARTCTRGILLRPWGKWAAELRDPYKAVRVWLGTFPQAK 157
            +L R   RG+  RPWGKWAAE+RDP KA RVWLGTF  A+
Sbjct:   84 DLRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAE 123          

HSP 2 Score: 31.5722 bits (70), Expect = 1.991e-12
Identity = 15/27 (55.56%), Postives = 16/27 (59.26%), Query Frame = 1
Query:  142 FPTGEETARAYDEAAQRIGGYKGNLNF 222
            F T E  A AYDEAA +  G K  LNF
Sbjct:  119 FETAESAALAYDEAALKFKGSKAKLNF 145          
BLAST of EY756679 vs. ExPASy Swiss-Prot
Match: EF113_ARATH (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana GN=ERF113 PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 4.387e-12
Identity = 24/34 (70.59%), Postives = 28/34 (82.35%), Query Frame = 2
Query:   59 RGILLRPWGKWAAELRDPYKAVRVWLGTFPQAKK 160
            RG+  RPWGKWAAE+RDP KA RVWLGTF  A++
Sbjct:   40 RGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEE 73          

HSP 2 Score: 31.5722 bits (70), Expect = 4.387e-12
Identity = 15/27 (55.56%), Postives = 16/27 (59.26%), Query Frame = 1
Query:  142 FPTGEETARAYDEAAQRIGGYKGNLNF 222
            F T EE A AYD AA +  G K  LNF
Sbjct:   68 FETAEEAALAYDRAALKFKGTKAKLNF 94          
BLAST of EY756679 vs. ExPASy Swiss-Prot
Match: EF115_ARATH (Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana GN=ERF115 PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 2.085e-11
Identity = 24/33 (72.73%), Postives = 27/33 (81.82%), Query Frame = 2
Query:   59 RGILLRPWGKWAAELRDPYKAVRVWLGTFPQAK 157
            RG+  RPWGKWAAE+RDP KA RVWLGTF  A+
Sbjct:   93 RGVRQRPWGKWAAEIRDPQKAARVWLGTFETAE 125          

HSP 2 Score: 29.261 bits (64), Expect = 2.085e-11
Identity = 14/27 (51.85%), Postives = 15/27 (55.56%), Query Frame = 1
Query:  142 FPTGEETARAYDEAAQRIGGYKGNLNF 222
            F T E  A AYD AA +  G K  LNF
Sbjct:  121 FETAEAAALAYDNAALKFKGSKAKLNF 147          
BLAST of EY756679 vs. ExPASy Swiss-Prot
Match: ERF3_TOBAC (Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum GN=ERF3 PE=2 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 2.722e-11
Identity = 25/52 (48.08%), Postives = 33/52 (63.46%), Query Frame = 2
Query:    2 PRPLSGSPRRLCELARTCTRGILLRPWGKWAAELRDPYKAVRVWLGTFPQAK 157
            P P++G P           RG+  RPWG++AAE+RDP+K  RVWLGTF  A+
Sbjct:   10 PAPVTGEPNGSGGSKEIRFRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAE 61          

HSP 2 Score: 30.4166 bits (67), Expect = 2.722e-11
Identity = 14/29 (48.28%), Postives = 18/29 (62.07%), Query Frame = 1
Query:  142 FPTGEETARAYDEAAQRIGGYKGNLNFGL 228
            F + E+ ARAYD AA+ + G K   NF L
Sbjct:   57 FDSAEDAARAYDAAARALRGPKAKTNFPL 85          
The following BLAST results are available for this feature:
BLAST of EY756679 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
EF112_ARATH6.673e-1470.59Ethylene-responsive transcription factor ERF112 OS... [more]
ABR1_ARATH3.148e-1372.73Ethylene-responsive transcription factor ABR1 OS=A... [more]
EF110_ARATH4.165e-1369.70Ethylene-responsive transcription factor ERF110 OS... [more]
RAP26_ARATH9.176e-1372.73Ethylene-responsive transcription factor RAP2-6 OS... [more]
EF114_ARATH1.991e-1265.00Ethylene-responsive transcription factor ERF114 OS... [more]
EF113_ARATH4.387e-1270.59Ethylene-responsive transcription factor ERF113 OS... [more]
EF115_ARATH2.085e-1172.73Ethylene-responsive transcription factor ERF115 OS... [more]
ERF3_TOBAC2.722e-1148.08Ethylene-responsive transcription factor 3 OS=Nico... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-011-D10-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756679 ID=EY756679; Name=EY756679; organism=Citrus sinensis; type=EST; length=874bp
CCCGCGTCCGCTGAGTGGTTCGCCAAGAAGACTCTGCGAGCTCGCCAGAA
CGTGTACACGAGGAATACTGCTCAGGCCGTGGGGAAAATGGGCAGCTGAA
CTTAGAGACCCTTACAAGGCCGTCCGCGTTTGGCTCGGCACTTTCCCACA
GGCGAAGAAACCGCGAGAGCTTATGATGAAGCCGCCCAGCGCATCGGCGG
ATACAAGGGCAACCTCAACTTCGGTCTCCCGCCGCCGCCAATAGCTCCAC
CCCCGGCTAATAGACGCTGCATGCCATCCCCTGAGGTGACTCCACCGAGA
TTTGAGACCATCGGAACCCCTCCGGCTCCGGCGCCGTCCCCGTGGGTGGC
GTTTGGGTATCGCAATGAGCTTTATCAACCCAGGGCAGTAGACGACAAGG
TTGAGCTGAGGCATCAAATTTCGCGCTTGGAACCCCTTGTGGGATTGGAG
CCATTAATGAGGCCGCCGAGTGGAGACGTTGCTGGTGGGTGTGACTCGGT
GGACTTTTGGATGCTTGATGACTCGGCGGCGACTCAGCAGCTGAACAGCA
GTCTGCTCTTGCGTTACGATACATAATAGTAAACTAATTGAGTTGCGGCC
GCGCTGTGTGTTCATGTGGGTCTGTGGTAAGACCAGTGTGTACAATGCTG
ATCACGTTGCTTGATTCTGCGTTTCATGCTGTGATGACTATGTTATATGA
CCTCGCGATCATGCTGCCATGACTGTGCTTACTGAATGGGAGTGGACGCG
CCTATGACCGGNACTAATTACGCGCTTCGTGTGAATAGCAGCGGTGTACG
CTGCTTCTCCTGCTGCTTTCACGCACCTCTCTATTCATCCTCCGTCATTG
CGAAAAAAAAAATTACGGCGCCGT
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