EY756671
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756671 vs. ExPASy Swiss-Prot
Match: GMD1_ARATH (GDP-mannose 4,6 dehydratase 1 OS=Arabidopsis thaliana GN=GMD1 PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 1.871e-44 Identity = 83/96 (86.46%), Postives = 93/96 (96.88%), Query Frame = 3 Query: 3 VVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDIELAKREKVLVDAGYMDAQQQP 290 VVATEESHTV+EFL+V+FGYVGLNWKDHV IDKRYFRP EVDNLKGD+SKA+++LGWKP+VGFE+LVKMMVDED+ELAKREKVL DAGYMDAQQQP Sbjct: 266 VVATEESHTVKEFLDVSFGYVGLNWKDHVEIDKRYFRPTEVDNLKGDASKAKEMLGWKPKVGFEKLVKMMVDEDLELAKREKVLADAGYMDAQQQP 361
BLAST of EY756671 vs. ExPASy Swiss-Prot
Match: GMD2_ARATH (GDP-mannose 4,6 dehydratase 2 OS=Arabidopsis thaliana GN=MUR1 PE=1 SV=3) HSP 1 Score: 174.096 bits (440), Expect = 3.529e-43 Identity = 81/96 (84.38%), Postives = 94/96 (97.92%), Query Frame = 3 Query: 3 VVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDIELAKREKVLVDAGYMDAQQQP 290 VVATEE HTVEEFL+V+FGY+GLNWKD+V ID+RYFRPAEVDNL+GD+SKA++VLGWKP+VGFE+LVKMMVDED+ELAKREKVLVDAGYMDA+QQP Sbjct: 278 VVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQGDASKAKEVLGWKPQVGFEKLVKMMVDEDLELAKREKVLVDAGYMDAKQQP 373
BLAST of EY756671 vs. ExPASy Swiss-Prot
Match: GM4D_PSEAE (GDP-mannose 4,6-dehydratase OS=Pseudomonas aeruginosa GN=gca PE=1 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 9.677e-17 Identity = 39/81 (48.15%), Postives = 59/81 (72.84%), Query Frame = 3 Query: 3 VVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDIELAKRE 245 VVAT + TV + ++AF +VGL+++D + ID +FRPAEVD L G+ +KA++VLGWKPR ++L++MMV+ D+ RE Sbjct: 243 VVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVLGWKPRTSLDELIRMMVEADLRRVSRE 323
BLAST of EY756671 vs. ExPASy Swiss-Prot
Match: GMDS_MOUSE (GDP-mannose 4,6 dehydratase OS=Mus musculus GN=Gmds PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.066e-15 Identity = 42/96 (43.75%), Postives = 60/96 (62.50%), Query Frame = 3 Query: 3 VVATEESHTVEEFLEVAFGYVG--LNW---------------KDHVVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDIELAK 239 V+AT E H+V EF+E +F ++G + W K HV +D +Y+RP EVD L+GD SKA++ L WKPRV F++LV+ MV D+EL + Sbjct: 272 VIATGEVHSVREFVEKSFMHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCSKAQQKLNWKPRVAFDELVREMVQADVELMR 367
BLAST of EY756671 vs. ExPASy Swiss-Prot
Match: GMDS_CRIGR (GDP-mannose 4,6 dehydratase OS=Cricetulus griseus GN=GMDS PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.066e-15 Identity = 42/96 (43.75%), Postives = 60/96 (62.50%), Query Frame = 3 Query: 3 VVATEESHTVEEFLEVAFGYVG--LNW---------------KDHVVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDIELAK 239 V+AT E H+V EF+E +F ++G + W K HV +D +Y+RP EVD L+GD SKA++ L WKPRV F++LV+ MV D+EL + Sbjct: 272 VIATGEVHSVREFVEKSFMHIGKTIVWEGKNENEVGRCKETGKIHVTVDLKYYRPTEVDFLQGDCSKAQQKLNWKPRVAFDELVREMVQADVELMR 367
BLAST of EY756671 vs. ExPASy Swiss-Prot
Match: GMDS_HUMAN (GDP-mannose 4,6 dehydratase OS=Homo sapiens GN=GMDS PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.183e-14 Identity = 41/96 (42.71%), Postives = 60/96 (62.50%), Query Frame = 3 Query: 3 VVATEESHTVEEFLEVAFGYVG--LNW---------------KDHVVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDIELAK 239 V+AT E H+V EF+E +F ++G + W K HV +D +Y+RP EVD L+GD +KA++ L WKPRV F++LV+ MV D+EL + Sbjct: 272 VIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADVELMR 367
BLAST of EY756671 vs. ExPASy Swiss-Prot
Match: GMDS_DROME (GDP-mannose 4,6 dehydratase OS=Drosophila melanogaster GN=Gmd PE=1 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 6.491e-13 Identity = 40/100 (40.00%), Postives = 58/100 (58.00%), Query Frame = 3 Query: 3 VVATEESHTVEEFLEVAFGYVG--LNWKD---------------HVVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDIELAKREKV 251 V+AT E+H+V EF+E AF ++ + WK V I+ +YFRP EVD L+GD+SKA + L W P+V F +LV M+ DIEL ++ + Sbjct: 295 VIATGETHSVREFVEAAFKHIDREITWKGKGVDEVGVENGTGIVRVRINPKYFRPTEVDLLQGDASKANRELNWTPKVTFVELVSDMMKADIELMRKNPI 394
BLAST of EY756671 vs. ExPASy Swiss-Prot
Match: GMDS_DICDI (GDP-mannose 4,6 dehydratase OS=Dictyostelium discoideum GN=gmd PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.224e-11 Identity = 39/96 (40.62%), Postives = 56/96 (58.33%), Query Frame = 3 Query: 3 VVATEESHTVEEFLEVAF-----------------GYVGLNWKDHVVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDIELAK 239 V+AT E+H+V EF+E +F GY K +V ID++Y+RP EVD L G+ +KA+K+L W+ + F +LVK MV +DIE K Sbjct: 255 VIATGETHSVREFVEKSFKEIDIIIKWRGEAEKEEGYCEKTGKVYVKIDEKYYRPTEVDLLLGNPNKAKKLLQWQIKTSFGELVKEMVAKDIEYIK 350
BLAST of EY756671 vs. ExPASy Swiss-Prot
Match: GM4D_SHIFL (GDP-mannose 4,6-dehydratase OS=Shigella flexneri GN=gmd PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.727e-11 Identity = 37/116 (31.90%), Postives = 57/116 (49.14%), Query Frame = 3 Query: 3 VVATEESHTVEEFLEVAFGYVGLNWKDH---------------------------VVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDIELAKREKVLVDAGY 269 V+AT ++V +F+E+A +G+ + + +D RYFRPAEV+ L GD +KA + LGWKP + ++V MV D+E AK+ +L GY Sbjct: 250 VIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEAAKKHSLLKSHGY 365
BLAST of EY756671 vs. ExPASy Swiss-Prot
Match: GM4D_ECOLI (GDP-mannose 4,6-dehydratase OS=Escherichia coli (strain K12) GN=gmd PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.727e-11 Identity = 37/116 (31.90%), Postives = 57/116 (49.14%), Query Frame = 3 Query: 3 VVATEESHTVEEFLEVAFGYVGLNWKDH---------------------------VVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDIELAKREKVLVDAGY 269 V+AT ++V +F+E+A +G+ + + +D RYFRPAEV+ L GD +KA + LGWKP + ++V MV D+E AK+ +L GY Sbjct: 250 VIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEAAKKHSLLKSHGY 365 The following BLAST results are available for this feature:
BLAST of EY756671 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756671 ID=EY756671; Name=EY756671; organism=Citrus sinensis; type=EST; length=524bpback to top |