EY756654

Overview
NameEY756654
Unique NameEY756654
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length891
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY756654_ssr627 microsatellite EY756654_ssr627:627..644. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY756654 vs. ExPASy Swiss-Prot
Match: EXPA1_ARATH (Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 3.232e-75
Identity = 132/170 (77.65%), Postives = 143/170 (84.12%), Query Frame = 2
Query:   14 EIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRN*GQNWQRNTYLNGQSLSFKVTTSDGRTETSYNDAPASWSFGRTDSGAQFR 523
            EI+C ND KWCLPG+I+VTATNFC          GGWCNPPQQHFDLSQPVFQ IAQYRAG+VPVAY+RVPC RRGGIRFTINGHSYFNLVLITNVGGAGDVH+  +KGSRTGWQ MSRN GQNWQ N+YLNGQSLSFKVTTSDG+T  S N A A WSFG+T +GAQ R
Sbjct:   81 EIRCQNDGKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQRIAQYRAGIVPVAYRRVPCVRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAMVKGSRTGWQAMSRNWGQNWQSNSYLNGQSLSFKVTTSDGQTIVSNNVANAGWSFGQTFTGAQLR 250          
BLAST of EY756654 vs. ExPASy Swiss-Prot
Match: EXP10_ARATH (Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=2 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 1.228e-74
Identity = 128/170 (75.29%), Postives = 144/170 (84.71%), Query Frame = 2
Query:   14 EIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRN*GQNWQRNTYLNGQSLSFKVTTSDGRTETSYNDAPASWSFGRTDSGAQFR 523
            EI+C ND KWCLPG+I+VTATNFC          GGWCNPP +HFDL+QPVFQ IAQYRAG+VPV+Y+RVPC RRGGIRFTINGHSYFNLVLITNVGGAGDVH+ +IKGSRT WQ MSRN GQNWQ N+YLNGQ+LSFKVTTSDGRT  S+N APA WS+G+T +G QFR
Sbjct:   80 EIRCENDGKWCLPGSIVVTATNFCPPNNALANNNGGWCNPPLEHFDLAQPVFQRIAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAAIKGSRTVWQAMSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVVSFNAAPAGWSYGQTFAGGQFR 249          
BLAST of EY756654 vs. ExPASy Swiss-Prot
Match: EXP15_ARATH (Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=2 SV=2)

HSP 1 Score: 271.552 bits (693), Expect = 4.368e-72
Identity = 127/170 (74.71%), Postives = 139/170 (81.76%), Query Frame = 2
Query:   14 EIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRN*GQNWQRNTYLNGQSLSFKVTTSDGRTETSYNDAPASWSFGRTDSGAQFR 523
            EIKC +D  WCLPG I+VTATNFC          GGWCNPP  HFDLSQPVFQ IAQY+AGVVPV+Y+RVPC RRGGIRFTINGHSYFNLVL+TNVGGAGDVH+V++KGSRT WQ MSRN GQNWQ N  LNGQ+LSFKVT SDGRT  S N APASWSFG+T +G QFR
Sbjct:   84 EIKCQSDGAWCLPGAIIVTATNFCPPNNALPNNAGGWCNPPLHHFDLSQPVFQRIAQYKAGVVPVSYRRVPCMRRGGIRFTINGHSYFNLVLVTNVGGAGDVHSVAVKGSRTRWQQMSRNWGQNWQSNNLLNGQALSFKVTASDGRTVVSNNIAPASWSFGQTFTGRQFR 253          
BLAST of EY756654 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 4.231e-67
Identity = 119/170 (70.00%), Postives = 134/170 (78.82%), Query Frame = 2
Query:   14 EIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRN*GQNWQRNTYLNGQSLSFKVTTSDGRTETSYNDAPASWSFGRTDSGAQFR 523
            +IKCV+DPKWC+ GTI VT TNFC          GGWCNPPQ HFDL+QP+F  IAQY+AGVVPV Y+RV C R+GGIRFTINGHSYFNLVLITNV GAGDV +VSIKG+ T WQ MSRN GQNWQ N  L+GQ+LSFKVTTSDGRT  S N  P +WSFG+T +G QFR
Sbjct:   83 QIKCVDDPKWCIGGTITVTGTNFCPPNFAQANNAGGWCNPPQHHFDLAQPIFLRIAQYKAGVVPVQYRRVACRRKGGIRFTINGHSYFNLVLITNVAGAGDVISVSIKGTNTRWQSMSRNWGQNWQSNAKLDGQALSFKVTTSDGRTVISNNATPRNWSFGQTYTGKQFR 252          
BLAST of EY756654 vs. ExPASy Swiss-Prot
Match: EXPA8_ARATH (Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 2.742e-66
Identity = 117/170 (68.82%), Postives = 137/170 (80.59%), Query Frame = 2
Query:   14 EIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRT-GWQPMSRN*GQNWQRNTYLNGQSLSFKVTTSDGRTETSYNDAPASWSFGRTDSGAQF 520
            E+KC +DP+WCL  TI VTATNFC          GGWCNPP QHFDL++P F  IAQYRAG+VPV+++RVPC ++GGIRFTINGHSYFNLVLI+NVGGAGDVHAVSIKGS+T  WQ MSRN GQNWQ N+Y+N QSLSF+VTTSDGRT  S + AP++W FG+T  G QF
Sbjct:   84 EMKCNDDPRWCLGSTITVTATNFCPPNPGLSNDNGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRFTINGHSYFNLVLISNVGGAGDVHAVSIKGSKTQSWQAMSRNWGQNWQSNSYMNDQSLSFQVTTSDGRTLVSNDVAPSNWQFGQTYQGGQF 253          
BLAST of EY756654 vs. ExPASy Swiss-Prot
Match: EXPA2_ORYSJ (Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXPA2 PE=2 SV=2)

HSP 1 Score: 249.21 bits (635), Expect = 2.321e-65
Identity = 111/169 (65.68%), Postives = 131/169 (77.51%), Query Frame = 2
Query:   14 EIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRN*GQNWQRNTYLNGQSLSFKVTTSDGRTETSYNDAPASWSFGRTDSGAQF 520
            E++C ND +WCLPG++ VTATN C          GGWCNPP+ HFD+++P F  I  YRAG+VPV+Y+RVPC ++GGIRFTINGHSYFNLVL+TNV G GDV +VSIKGS TGWQPMSRN GQNWQ N+YL+GQSLSF+V  SDGRT TS N  PA W FG+T  G QF
Sbjct:   83 ELRCDNDGQWCLPGSVTVTATNLCPPNYALPNDDGGWCNPPRPHFDMAEPAFLQIGVYRAGIVPVSYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGPGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSYLDGQSLSFQVAVSDGRTVTSNNVVPAGWQFGQTFEGGQF 251          
BLAST of EY756654 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSJ (Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 3.960e-65
Identity = 112/169 (66.27%), Postives = 133/169 (78.70%), Query Frame = 2
Query:   14 EIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRN*GQNWQRNTYLNGQSLSFKVTTSDGRTETSYNDAPASWSFGRTDSGAQF 520
            E++C N    CLPG+I VTATNFC          GGWCNPP+ HFD+++P F HIAQYRAG+VPV+++RVPC ++GG+RFT+NGHSYFNLVL+TNV GAGDV +VSIKGSRTGWQPMSRN GQNWQ N +L+GQSLSF+VT SDGRT TS N A   W FG+T  G QF
Sbjct:   78 ELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNNVAHPGWQFGQTFEGGQF 246          
BLAST of EY756654 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSI (Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 3.960e-65
Identity = 112/169 (66.27%), Postives = 133/169 (78.70%), Query Frame = 2
Query:   14 EIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRN*GQNWQRNTYLNGQSLSFKVTTSDGRTETSYNDAPASWSFGRTDSGAQF 520
            E++C N    CLPG+I VTATNFC          GGWCNPP+ HFD+++P F HIAQYRAG+VPV+++RVPC ++GG+RFT+NGHSYFNLVL+TNV GAGDV +VSIKGSRTGWQPMSRN GQNWQ N +L+GQSLSF+VT SDGRT TS N A   W FG+T  G QF
Sbjct:   78 ELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNNVAHPGWQFGQTFEGGQF 246          
BLAST of EY756654 vs. ExPASy Swiss-Prot
Match: EXPA2_ARATH (Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 SV=2)

HSP 1 Score: 243.817 bits (621), Expect = 9.753e-64
Identity = 111/170 (65.29%), Postives = 134/170 (78.82%), Query Frame = 2
Query:   14 EIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTG-WQPMSRN*GQNWQRNTYLNGQSLSFKVTTSDGRTETSYNDAPASWSFGRTDSGAQF 520
            E++C +DP+WC+PG+I+V+ATNFC          GGWCNPP +HFDL++P F  IAQYRAG+VPVA++RVPC + GGIRFTING+ YF+LVLITNVGGAGD+ AVS+KGS+T  WQ MSRN GQNWQ NTYL GQSLSF+VT SDGRT  SY+  P  W FG+T  G QF
Sbjct:   86 ELQCEDDPEWCIPGSIIVSATNFCPPNFALANDNGGWCNPPLKHFDLAEPAFLQIAQYRAGIVPVAFRRVPCEKGGGIRFTINGNPYFDLVLITNVGGAGDIRAVSLKGSKTDQWQSMSRNWGQNWQSNTYLRGQSLSFQVTDSDGRTVVSYDVVPHDWQFGQTFEGGQF 255          
BLAST of EY756654 vs. ExPASy Swiss-Prot
Match: EXPA5_ARATH (Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 2.838e-63
Identity = 114/171 (66.67%), Postives = 137/171 (80.12%), Query Frame = 2
Query:   14 EIKCVNDPKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRN*GQNWQRNTYLNGQSLSFKVTTSDGRTETSYNDAPASWSFGRTDSGAQFR 523
            E+ CVNDP+WC+ G +I+VTATNFC          GG C+PP  HFDLSQP+++ IA Y++G++PV Y+RV C R GGIRFTINGHSYFNLVL+TNVGGAGDVH+VS+KGSRT WQ MSRN GQNWQ N+YLNGQSLSF VTTSD R+  S+N AP +WSFG+T +G QFR
Sbjct:   92 ELMCVNDPQWCIKGRSIVVTATNFCPP--------GGACDPPNHHFDLSQPIYEKIALYKSGIIPVMYRRVRCKRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSVSMKGSRTKWQLMSRNWGQNWQSNSYLNGQSLSFVVTTSDRRSVVSFNVAPPTWSFGQTYTGGQFR 254          
The following BLAST results are available for this feature:
BLAST of EY756654 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
EXPA1_ARATH3.232e-7577.65Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 ... [more]
EXP10_ARATH1.228e-7475.29Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=... [more]
EXP15_ARATH4.368e-7274.71Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=... [more]
EXP14_ARATH4.231e-6770.00Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=... [more]
EXPA8_ARATH2.742e-6668.82Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 ... [more]
EXPA2_ORYSJ2.321e-6565.68Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA4_ORYSJ3.960e-6566.27Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA4_ORYSI3.960e-6566.27Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4... [more]
EXPA2_ARATH9.753e-6465.29Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 ... [more]
EXPA5_ARATH2.838e-6366.67Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-011-B02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756654 ID=EY756654; Name=EY756654; organism=Citrus sinensis; type=EST; length=891bp
CCACGCGTCCGATGAGATTAAGTGTGTTAATGACCCCAAATGGTGCTTGC
CCGGCACCATTATGGTCACAGCTACCAATTTTTGCCCACCGAACAACGCC
CTCCCCAACAATGCAGGCGGTTGGTGCAATCCTCCGCAGCAACATTTTGA
TCTCTCTCAGCCTGTGTTCCAACACATTGCTCAATACAGAGCTGGAGTTG
TCCCTGTAGCTTACAAGAGGGTACCCTGCGGAAGAAGGGGAGGCATCAGG
TTCACAATCAATGGGCATTCCTACTTCAACCTAGTGTTGATCACCAACGT
TGGTGGTGCTGGTGATGTTCATGCTGTTTCAATCAAAGGGTCTAGAACTG
GCTGGCAGCCCATGTCAAGAAACTGAGGCCAAAACTGGCAAAGGAACACT
TATCTCAATGGCCAAAGCCTGTCATTTAAGGTCACCACAAGCGATGGCCG
CACTGAGACTTCCTACAATGATGCCCCTGCTAGCTGGTCCTTTGGCCGAA
CTGACTCCGGTGCTCAATTCCGCTAGAGCCACCAAGACCATTAGAGATTG
GGTGTTAACACCTATTGTAGCTAAATATTCCTGCACTAAGTAGTATATTT
TAGTAGTGAATGGTACCATACTAAGGTATATATATATATATATAATATAG
AAGTAGCTATGTGGCTAGTTTTTGGCTTCAGGGTCAAAAATGAAAAGAGG
CGCTTATTCTAAATGGCGTATTTTTTTCATTTTGATTGATTTTTATGCTG
CGTGGAGTGTCTAATATGGGATCCTCTATTATCTTGGGGATCATCTGTTA
CTTCCTTTTGGGGGTTCTGGTGAAGGCACNAATGCTGAGGGGAAATTTTC
AGCCGCATTGTGTTGAAAACAGCTCCCTTTTTGATGCTCTG
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