CX286810

Overview
NameCX286810
Unique NameCX286810
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length562
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX286810 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 5.279e-30
Identity = 64/155 (41.29%), Postives = 98/155 (63.23%), Query Frame = 1
Query:   94 ITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKR----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESG-------EFYNAMKEEMYMDVYGFGEIILEILT 525
            +  +GT+RHKN++R LG C+NR+   L+YDY+PNG+L   +  +R    DW  +Y+I+LG A+GL +LHHDC P I H D+KA+NI+   + EP++A+FG   L +L D     + + T +G       E+  +MK     DVY +G ++LE+LT
Sbjct:  840 VKTLGTIRHKNIVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRGSSLDWDLRYRILLGAAQGLAYLHHDCLPPIVHRDIKANNILIGLDFEPYIADFG---LAKLVDEGDIGRCSNTVAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLT 991          
BLAST of CX286810 vs. ExPASy Swiss-Prot
Match: Y5148_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g61480 OS=Arabidopsis thaliana GN=At5g61480 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.176e-29
Identity = 72/192 (37.50%), Postives = 110/192 (57.29%), Query Frame = 1
Query:   10 KAVLPTGITVSVKKIEWGATRIK---------IVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIR-------TKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGR 534
            KA +P G  ++VKK+ WG  +           +++E +  +G VRH+N++RLLG C NR    LLY+Y+PNG+L + +           +W A Y+I +GVA+G+C+LHHDC P I H DLK SNI+ D + E  +A+FG   L Q  +  S  A      + E+   ++ +   D+Y +G I+LEI+T  R
Sbjct:  735 KAEMPNGEIIAVKKL-WGKNKENGKIRRRKSGVLAE-VDVLGNVRHRNIVRLLGCCTNRDCTMLLYEYMPNGSLDDLLHGGDKTMTAAAEWTALYQIAIGVAQGICYLHHDCDPVIVHRDLKPSNILLDADFEARVADFGVAKLIQTDESMSVVAGSYGYIAPEYAYTLQVDKKSDIYSYGVILLEIITGKR 924          
BLAST of CX286810 vs. ExPASy Swiss-Prot
Match: Y4265_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g26540 OS=Arabidopsis thaliana GN=At4g26540 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.006e-29
Identity = 70/188 (37.23%), Postives = 104/188 (55.32%), Query Frame = 1
Query:   10 KAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKR-----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFK-----YLTQLADGSFPAKIAWTESGEFYNAMKEEMYM------DVYGFGEIILEILT 525
            +  +P+G +++VKK+ W        +  I  +G++RH+N++RLLG+C NR+   L YDYLPNG+LS ++         DW A+Y +VLGVA  L +LHHDC P I HGD+KA N++   + EP+LA+FG       Y     D + P           Y A +           DVY +G ++LE+LT
Sbjct:  776 RITIPSGESLAVKKM-WSKEESGAFNSEIKTLGSIRHRNIVRLLGWCSNRNLKLLFYDYLPNGSLSSRLHGAGKGGCVDWEARYDVVLGVAHALAYLHHDCLPTIIHGDVKAMNVLLGPHFEPYLADFGLARTISGYPNTGIDLAKPTNRPPMAGSYGYMAPEHASMQRITEKSDVYSYGVVLLEVLT 962          
BLAST of CX286810 vs. ExPASy Swiss-Prot
Match: Y1341_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 3.421e-29
Identity = 72/186 (38.71%), Postives = 107/186 (57.53%), Query Frame = 1
Query:   10 KAVLPTGITVSVKKI-------EWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKR--DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPA--KIAWTE---SGEFYNAMKEEMYMDVYGFGEIILEILT 525
            KA +P G  V+VKK+       E G + I   +  I  +G +RH+N+++LLG+C N+    LLY+Y PNGNL + ++  R  DW  +YKI +G A+GL +LHHDC PAI H D+K +NI+ D   E  LA+FG   L   +     A  ++A +    + E+   M      DVY +G ++LEIL+
Sbjct:  788 KAEIPNGDIVAVKKLWKTKDNNEEGESTIDSFAAEIQILGNIRHRNIVKLLGYCSNKSVKLLLYNYFPNGNLQQLLQGNRNLDWETRYKIAIGAAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAILADFGLAKLMMNSPNYHNAMSRVAGSYGYIAPEYGYTMNITEKSDVYSYGVVLLEILS 973          
BLAST of CX286810 vs. ExPASy Swiss-Prot
Match: RCH1_ARATH (LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 3.783e-28
Identity = 70/196 (35.71%), Postives = 109/196 (55.61%), Query Frame = 1
Query:   10 KAVLPTGITVSVKKIEWGATRIKI------------VSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRD-----WAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESG-------EFYNAMKEEMYMDVYGFGEIILEILT 525
            KA +P    ++VKK+ W  T   +             S  +  +G++RHKN++R LG C+N++   L+YDY+ NG+L   +  +       W  +YKI+LG A+GL +LHHDC P I H D+KA+NI+   + EP++ +FG   L    DG F A+ + T +G       E+  +MK     DVY +G ++LE+LT
Sbjct:  801 KAEMPNREVIAVKKL-WPVTVPNLNEKTKSSGVRDSFSAEVKTLGSIRHKNIVRFLGCCWNKNTRLLMYDYMSNGSLGSLLHERSGVCSLGWEVRYKIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPDFEPYIGDFGLAKLVD--DGDF-ARSSNTIAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLT 992          
BLAST of CX286810 vs. ExPASy Swiss-Prot
Match: Y2317_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 4.941e-28
Identity = 68/190 (35.79%), Postives = 108/190 (56.84%), Query Frame = 1
Query:   10 KAVLPTGITVSVKKIEWGA---------TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAYLLYDYLPNGNLSEKIRTKR----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTE---SGEFYNAMKEEMYMDVYGFGEIILEILT 525
            KAV+P+G T++VKK+E            T     +E +T +G +RH+N++RL  FCY++  +   LLY+Y+  G+L E +   +    DW  ++ I LG A GL +LHHDC P I H D+K++NI+ DEN E H+ +FG   +  +      + +A +    + E+   MK     D+Y FG ++LE+LT
Sbjct:  835 KAVMPSGKTIAVKKLESNREGNNNNSNNTDNSFRAEILT-LGKIRHRNIVRLYSFCYHQGSNSNLLLYEYMSRGSLGELLHGGKSHSMDWPTRFAIALGAAEGLAYLHHDCKPRIIHRDIKSNNILIDENFEAHVGDFGLAKVIDMPLSKSVSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELLT 1023          
BLAST of CX286810 vs. ExPASy Swiss-Prot
Match: GSO1_ARATH (LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 9.317e-27
Identity = 69/199 (34.67%), Postives = 114/199 (57.29%), Query Frame = 1
Query:   10 KAVLPTGITVSVKKIEWGATRI--KIVSEFITRIGTVRHKNLIRLLGFCYNRHQAY--LLYDYLPNGNL----------SEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF-KYLTQLADGSFPAKIAWTES-----GEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNA 546
            KA L  G TV+VKKI W    +  K  S  +  +G +RH++L++L+G+C ++ +    L+Y+Y+ NG++           EK +   DW A+ +I +G+A+G+ +LHHDC P I H D+K+SN++ D NME HL +FG  K LT+  D +  +   +  S      E+  ++K     DVY  G +++EI+T    T++
Sbjct:  967 KAELENGETVAVKKILWKDDLMSNKSFSREVKTLGRIRHRHLVKLMGYCSSKSEGLNLLIYEYMKNGSIWDWLHEDKPVLEKKKKLLDWEARLRIAVGLAQGVEYLHHDCVPPIVHRDIKSSNVLLDSNMEAHLGDFGLAKVLTENCDTNTDSNTWFACSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKMPTDS 1165          
BLAST of CX286810 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.076e-26
Identity = 68/191 (35.60%), Postives = 106/191 (55.50%), Query Frame = 1
Query:   10 KAVLPTGITVSVKKIEW--GATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSE------KIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESG----EFYNAMKEEMYMDVYGFGEIILEILTNGRLTNA 546
            KA L  G  V++KK+    G    +  +E  T IG ++H+NL+ LLG+C    +  L+Y+Y+  G+L +      KI  K +W A+ KI +G ARGL FLHH+C P I H D+K+SN++ DEN+E  +++FG   L    D            G    E+Y + +     DVY +G ++LE+LT  + T++
Sbjct:  904 KAQLKDGSVVAIKKLIHVSGQGDREFTAEMET-IGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKIGIKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKQPTDS 1093          
BLAST of CX286810 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 6.039e-26
Identity = 66/191 (34.55%), Postives = 107/191 (56.02%), Query Frame = 1
Query:   10 KAVLPTGITVSVKKIEW--GATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSE------KIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESG----EFYNAMKEEMYMDVYGFGEIILEILTNGRLTNA 546
            KA+L  G  V++KK+    G    + ++E  T IG ++H+NL+ LLG+C    +  L+Y+++  G+L +      K   K +W+ + KI +G ARGL FLHH+C P I H D+K+SN++ DEN+E  +++FG   L    D            G    E+Y + +     DVY +G ++LE+LT  R T++
Sbjct:  899 KAILKDGSAVAIKKLIHVSGQGDREFMAEMET-IGKIKHRNLVPLLGYCKVGDERLLVYEFMKYGSLEDVLHDPKKAGVKLNWSTRRKIAIGSARGLAFLHHNCSPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDS 1088          
BLAST of CX286810 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 7.888e-26
Identity = 67/191 (35.08%), Postives = 105/191 (54.97%), Query Frame = 1
Query:   10 KAVLPTGITVSVKKIEW--GATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSE------KIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESG----EFYNAMKEEMYMDVYGFGEIILEILTNGRLTNA 546
            KA L  G  V++KK+    G    +  +E  T IG ++H+NL+ LLG+C    +  L+Y+Y+  G+L +      K   K +W A+ KI +G ARGL FLHH+C P I H D+K+SN++ DEN+E  +++FG   L    D            G    E+Y + +     DVY +G ++LE+LT  + T++
Sbjct:  904 KAQLKDGSVVAIKKLIHVSGQGDREFTAEMET-IGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKTGIKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKQPTDS 1093          
The following BLAST results are available for this feature:
BLAST of CX286810 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 258
Match NameE-valueIdentityDescription
RCH2_ARATH5.279e-3041.29Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]
Y5148_ARATH1.176e-2937.50Probable leucine-rich repeat receptor-like protein... [more]
Y4265_ARATH2.006e-2937.23Probable LRR receptor-like serine/threonine-protei... [more]
Y1341_ARATH3.421e-2938.71Probable LRR receptor-like serine/threonine-protei... [more]
RCH1_ARATH3.783e-2835.71LRR receptor-like serine/threonine-protein kinase ... [more]
Y2317_ARATH4.941e-2835.79Probable leucine-rich repeat receptor-like protein... [more]
GSO1_ARATH9.317e-2734.67LRR receptor-like serine/threonine-protein kinase ... [more]
BRI1_SOLLC2.076e-2635.60Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]
BRI1_ARATH6.039e-2634.55Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
BRI1_SOLPE7.888e-2635.08Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]

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Properties
Property NameValue
Genbank descriptionC01001C09Rv Veg1 Citrus clementina cDNA clone C01001C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286810 ID=CX286810; Name=CX286810; organism=Citrus clementina; type=EST; length=562bp
GCAGGTTGCAAAGCAGTTCTGCCCACGGGTATTACAGTTTCAGTGAAAAA
GATTGAATGGGGAGCAACGAGAATTAAAATAGTGTCAGAATTTATAACAC
GAATAGGCACTGTAAGGCACAAGAATTTGATCAGATTGCTTGGTTTTTGC
TACAACAGGCATCAGGCTTATCTGTTATACGATTACTTGCCTAATGGAAA
TTTGTCTGAAAAGATCAGAACGAAGAGGGACTGGGCGGCCAAATACAAAA
TTGTACTTGGAGTTGCTAGGGGTCTATGTTTCCTTCACCATGATTGCTAT
CCTGCAATTCCACATGGAGATTTGAAGGCAAGTAACATAGTTTTCGATGA
AAATATGGAACCTCATTTGGCAGAATTTGGCTTCAAATATCTGACACAAT
TGGCTGATGGTTCATTTCCAGCCAAAATTGCCTGGACAGAATCAGGTGAA
TTCTACAATGCCATGAAAGAGGAAATGTACATGGATGTTTATGGCTTTGG
AGAGATCATTCTCGAAATCTTGACTAATGGTAGGCTGACAAATGCGGGAA
GTAGCTTACAAA
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