CX286874

Overview
NameCX286874
Unique NameCX286874
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length403
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX286874 vs. ExPASy Swiss-Prot
Match: SCP51_ARATH (Serine carboxypeptidase-like 51 OS=Arabidopsis thaliana GN=SCPL51 PE=2 SV=2)

HSP 1 Score: 239.58 bits (610), Expect = 3.834e-63
Identity = 110/135 (81.48%), Postives = 120/135 (88.89%), Query Frame = 2
Query:    2 WGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYAEDNSS--FVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGK 400
            WGYVEVRPKAHMFWW YKSPYR+ENPSKPWPIILWLQGGPGASGVGIGNF+EVGP DT+LKPRNSTWLKKADLLFVD+PVG GYS+ E N    +VK+D EAA DLT LL +LFNKN+ L +SPLFIVAESYGGK
Sbjct:   36 WGYVEVRPKAHMFWWHYKSPYRVENPSKPWPIILWLQGGPGASGVGIGNFQEVGPLDTFLKPRNSTWLKKADLLFVDSPVGAGYSFVEGNQKDLYVKSDEEAAQDLTKLLQQLFNKNQTLNQSPLFIVAESYGGK 170          
BLAST of CX286874 vs. ExPASy Swiss-Prot
Match: RISC_MOUSE (Retinoid-inducible serine carboxypeptidase OS=Mus musculus GN=Scpep1 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 2.767e-37
Identity = 71/133 (53.38%), Postives = 91/133 (68.42%), Query Frame = 2
Query:    2 WGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYAEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGK 400
            W YV VR  AHMFWWLY +    +N S+  P+++WLQGGPG S  G GNFEE+GP DT LKPRN+TWL+ A LLFVDNPVGTG+SY     ++ K+    A+D+  LL   F+ ++  Q  P +I +ESYGGK
Sbjct:   40 WDYVTVRKDAHMFWWLYYATNPCKNFSE-LPLVMWLQGGPGGSSTGFGNFEEIGPLDTQLKPRNTTWLQWASLLFVDNPVGTGFSYVNTTDAYAKDLDTVASDMMVLLKSFFDCHKEFQTVPFYIFSESYGGK 171          
BLAST of CX286874 vs. ExPASy Swiss-Prot
Match: RISC_RAT (Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus GN=Scpep1 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 3.059e-36
Identity = 70/133 (52.63%), Postives = 90/133 (67.67%), Query Frame = 2
Query:    2 WGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYAEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGK 400
            W YV VR  A MFWWLY +    +N S+  P+++WLQGGPG S  G GNFEE+GP DT LKPRN+TWL+ A LLFVDNPVGTG+SY     ++ K+    A+D+  LL   F+ ++  Q  P +I +ESYGGK
Sbjct:   40 WDYVTVREDARMFWWLYYATNPCKNFSE-LPLVMWLQGGPGGSSTGFGNFEEIGPLDTRLKPRNTTWLQWASLLFVDNPVGTGFSYVNTTDAYAKDLDTVASDMMVLLKSFFDCHKEFQTVPFYIFSESYGGK 171          
BLAST of CX286874 vs. ExPASy Swiss-Prot
Match: RISC_HUMAN (Retinoid-inducible serine carboxypeptidase OS=Homo sapiens GN=SCPEP1 PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 8.901e-36
Identity = 68/133 (51.13%), Postives = 91/133 (68.42%), Query Frame = 2
Query:    2 WGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYAEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGK 400
            W YV VR  A+MFWWLY +    +N S+  P+++WLQGGPG S  G GNFEE+GP D+ LKPR +TWL+ A LLFVDNPVGTG+SY   + ++ K+    A+D+  LL   F+ ++  Q  P +I +ESYGGK
Sbjct:   40 WDYVTVRKDAYMFWWLYYATNSCKNFSE-LPLVMWLQGGPGGSSTGFGNFEEIGPLDSDLKPRKTTWLQAASLLFVDNPVGTGFSYVNGSGAYAKDLAMVASDMMVLLKTFFSCHKEFQTVPFYIFSESYGGK 171          
BLAST of CX286874 vs. ExPASy Swiss-Prot
Match: VCP_AEDAE (Vitellogenic carboxypeptidase OS=Aedes aegypti GN=VCP PE=1 SV=3)

HSP 1 Score: 93.5893 bits (231), Expect = 3.398e-19
Identity = 47/135 (34.81%), Postives = 77/135 (57.04%), Query Frame = 2
Query:   11 VEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTY----LKPRNSTWLKKADLLFVDNPVGTGYSYAEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKF 403
            V+ +  +++F+W   +    +N  +  PI++WLQGGPGAS +  G FEE GPF  +    +K R  +W +   ++++DNPVGTG+S+ + +  +  N+     +L   + + F     L K P +I  ESYGGKF
Sbjct:   83 VDAKHNSNLFFWYVPA----KNNREQAPILVWLQGGPGASSL-FGMFEENGPFHIHRNKSVKQREYSWHQNHHMIYIDNPVGTGFSFTDSDEGYSTNEEHVGENLMKFIQQFFVLFPNLLKHPFYISGESYGGKF 212          
BLAST of CX286874 vs. ExPASy Swiss-Prot
Match: SCP42_ARATH (Serine carboxypeptidase-like 42 OS=Arabidopsis thaliana GN=SCPL42 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.291e-18
Identity = 52/138 (37.68%), Postives = 73/138 (52.90%), Query Frame = 2
Query:    5 GYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPF-----DTYLKPRNSTWLKKADLLFVDNPVGTGYSYAEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKF 403
            GYV+V  KA    + Y      +  SKP  + LWL GGPG S +G G F E+GPF        L+  + +W K + LLFV++P G G+SY+  +S +   D   AND+   L+  F K   L+   LF+  ESY G +
Sbjct:   49 GYVDVDVKAGRSLFYYYVEAVKQPDSKP--LTLWLNGGPGCSSIGGGAFTELGPFYPTGDGRGLRVNSMSWNKASHLLFVESPAGVGWSYSNKSSDYNTGDKSTANDMLVFLLRWFEKFPKLKSRDLFLTGESYAGHY 184          
BLAST of CX286874 vs. ExPASy Swiss-Prot
Match: SCP41_ARATH (Serine carboxypeptidase-like 41 OS=Arabidopsis thaliana GN=SCPL41 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.907e-18
Identity = 45/109 (41.28%), Postives = 64/109 (58.72%), Query Frame = 2
Query:   92 PIILWLQGGPGASGVGIGNFEEVGPF-----DTYLKPRNSTWLKKADLLFVDNPVGTGYSYAEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKF 403
            P+ LWL GGPG S VG G F E+GPF        L+  + +W K ++LLFVD+P G G+SY+  +S +   D  AA+D+   L+  F+K   L+   LF+  ESY G +
Sbjct:   72 PLTLWLNGGPGCSSVGGGAFTELGPFYPTGYGRGLRINSMSWNKASNLLFVDSPAGVGWSYSNRSSDYNAGDKSAASDMLVFLLRWFDKFPELKSHDLFLTGESYAGHY 180          
BLAST of CX286874 vs. ExPASy Swiss-Prot
Match: SCP43_ARATH (Serine carboxypeptidase-like 43 OS=Arabidopsis thaliana GN=SCPL43 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.409e-18
Identity = 47/121 (38.84%), Postives = 67/121 (55.37%), Query Frame = 2
Query:   62 YRIENPSKP--WPIILWLQGGPGASGVGIGNFEEVGPF-----DTYLKPRNSTWLKKADLLFVDNPVGTGYSYAEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKF 403
            Y +E   +P   P+ LWL GGPG S VG G F E+GPF        L+  + +W K ++LLFV++P G G+SY+  +S +   D    ND+   L+  FNK   L+   LF+  ESY G +
Sbjct:   63 YYVEAVKEPDTKPLTLWLNGGPGCSSVGGGAFTELGPFYPTGDGRGLRLNSMSWNKASNLLFVESPAGVGWSYSNRSSDYNTGDKSTVNDMLVFLLRWFNKFPELKSRDLFLTGESYAGHY 183          
BLAST of CX286874 vs. ExPASy Swiss-Prot
Match: SCP21_ARATH (Serine carboxypeptidase-like 21 OS=Arabidopsis thaliana GN=SCPL21 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 6.409e-18
Identity = 49/139 (35.25%), Postives = 74/139 (53.24%), Query Frame = 2
Query:    5 GYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNS--------TWLKKADLLFVDNPVGTGYSYAEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGG 397
            GYV +    +   W Y      E  +   P++LWL GGPG S +  G   E GPF+   K +NS        +W K ++++++D+PVG G+SY+ DN+ +  +D + A+D  T L+E F      Q +P FI  ESY G
Sbjct:   47 GYVAIDKHRNKNLWYYF--VESERNASVDPVVLWLNGGPGCSSMD-GFVYEHGPFNFEPKKKNSHLLHLNPYSWSKVSNIIYLDSPVGVGFSYSNDNADYTTDDTKTASDTHTFLLEWFKMFPEFQSNPFFISGESYAG 182          
BLAST of CX286874 vs. ExPASy Swiss-Prot
Match: SCP50_ARATH (Serine carboxypeptidase-like 50 OS=Arabidopsis thaliana GN=SCPL50 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.370e-18
Identity = 51/143 (35.66%), Postives = 76/143 (53.15%), Query Frame = 2
Query:    5 GYVEVRPK--AHMFWWLYKSPYRIENPSKPWP---IILWLQGGPGASGVGIGNFEEVGPFD-----TYLKPRNSTWLKKADLLFVDNPVGTGYSYAEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKF 403
            GY+ V+P   + MF+  Y++    + P+ P P   +++WLQGGPG S + IGNF E+GP+      T L+     W +   LLFVDNP+G G+S A        N  + A  L   L+E   +N   +  P++   ESY GK+
Sbjct:   38 GYLPVKPAPGSSMFYAFYEA----QEPTTPLPDTPLLVWLQGGPGCSSM-IGNFYELGPWRVVSRATDLERNPGAWNRLFGLLFVDNPIGVGFSIAASQQDIPTNQRQVAEHLYAALVEFLEQNPSFENRPVYFTGESYAGKY 175          
The following BLAST results are available for this feature:
BLAST of CX286874 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
SCP51_ARATH3.834e-6381.48Serine carboxypeptidase-like 51 OS=Arabidopsis tha... [more]
RISC_MOUSE2.767e-3753.38Retinoid-inducible serine carboxypeptidase OS=Mus ... [more]
RISC_RAT3.059e-3652.63Retinoid-inducible serine carboxypeptidase OS=Ratt... [more]
RISC_HUMAN8.901e-3651.13Retinoid-inducible serine carboxypeptidase OS=Homo... [more]
VCP_AEDAE3.398e-1934.81Vitellogenic carboxypeptidase OS=Aedes aegypti GN=... [more]
SCP42_ARATH1.291e-1837.68Serine carboxypeptidase-like 42 OS=Arabidopsis tha... [more]
SCP41_ARATH4.907e-1841.28Serine carboxypeptidase-like 41 OS=Arabidopsis tha... [more]
SCP43_ARATH6.409e-1838.84Serine carboxypeptidase-like 43 OS=Arabidopsis tha... [more]
SCP21_ARATH6.409e-1835.25Serine carboxypeptidase-like 21 OS=Arabidopsis tha... [more]
SCP50_ARATH8.370e-1835.66Serine carboxypeptidase-like 50 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionC01002A10Rv Veg1 Citrus clementina cDNA clone C01002A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286874 ID=CX286874; Name=CX286874; organism=Citrus clementina; type=EST; length=403bp
GTGGGGGTATGTTGAAGTTAGGCCAAAAGCACACATGTTTTGGTGGCTAT
ATAAAAGTCCATACAGAATTGAAAATCCCTCAAAGCCATGGCCTATCATT
CTTTGGTTGCAAGGTGGCCCTGGTGCTTCAGGAGTTGGGATTGGGAATTT
TGAAGAGGTTGGGCCATTTGACACTTATTTGAAGCCAAGGAATTCAACAT
GGTTGAAGAAAGCTGACCTATTATTTGTTGACAATCCTGTGGGAACAGGA
TACAGCTATGCTGAGGATAATAGCTCGTTTGTGAAAAACGATGTTGAGGC
AGCAAATGATTTAACTACATTGCTAATGGAGTTATTTAACAAGAATGAAA
TTCTGCAAAAGAGTCCTCTGTTTATTGTGGCAGAGTCTTATGGAGGCAAA
TTT
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