CX286889

Overview
NameCX286889
Unique NameCX286889
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length332
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX286889 vs. ExPASy Swiss-Prot
Match: GGH_ARATH (Gamma-glutamyl hydrolase OS=Arabidopsis thaliana GN=GGH PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 3.365e-19
Identity = 45/64 (70.31%), Postives = 52/64 (81.25%), Query Frame = 1 
Query:    1 TEDAIRVTQQAANFFISEARKSSNRPPARKVLDNLIYNYGPTYCGKAGKGYDEVYIFT*LRPVI 192
            +EDAI+VTQ AAN  +SEARKS NRP ++KVL NLIYNY PTYCG AG GYDEVYIFT  R ++
Sbjct:  284 SEDAIQVTQHAANHLVSEARKSLNRPESKKVLSNLIYNYKPTYCGYAGIGYDEVYIFTQQRSLL 347
[Close]
BLAST of CX286889 vs. ExPASy Swiss-Prot
Match: GGH_SOYBN (Gamma-glutamyl hydrolase OS=Glycine max PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.670e-18
Identity = 43/57 (75.44%), Postives = 49/57 (85.96%), Query Frame = 1 
Query:    1 TEDAIRVTQQAANFFISEARKSSNRPPARKVLDNLIYNYGPTYCGKAGKGYDEVYIF 171
            TEDAIRVTQ  ANFFISEARKS+N P A+KV D+LIYNY PT+ G AGKGYD+VY+F
Sbjct:  285 TEDAIRVTQSTANFFISEARKSTNTPDAQKVRDSLIYNYKPTFGGTAGKGYDQVYLF 341
The following BLAST results are available for this feature:
BLAST of CX286889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
GGH_ARATH3.365e-1970.31Gamma-glutamyl hydrolase OS=Arabidopsis thaliana G... [more]
GGH_SOYBN1.670e-1875.44Gamma-glutamyl hydrolase OS=Glycine max PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionC01002C03Rv Veg1 Citrus clementina cDNA clone C01002C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286889 ID=CX286889; Name=CX286889; organism=Citrus clementina; type=EST; length=332bp
ACAGAGGATGCCATTCGGGTGACCCAACAAGCTGCAAACTTTTTTATAAG
CGAAGCTAGGAAGTCATCAAACAGGCCACCTGCTCGAAAAGTACTTGACA
ACCTCATTTACAATTACGGTCCCACCTACTGCGGGAAGGCTGGGAAGGGA
TACGATGAGGTTTACATCTTTACCTAACTTCGACCAGTAATTCTGAGAAG
GTTGCCAGTTGTAAGTTGTTGGAAATATAGCAAGTGATGTTATTGTAACA
AACTATGTTATTGTTGTAACGAACTTTGCTGTATCGTATGAAGCTTATCT
TGGGTTTGTTTTTATAAAAAAAAAAAAAAAAA
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