CX286916
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX286916 vs. ExPASy Swiss-Prot
Match: HMGL_SOYBN (HMG1/2-like protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.570e-22 Identity = 56/114 (49.12%), Postives = 68/114 (59.65%), Query Frame = 3 Query: 39 KDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDXXXXXXXXXXXXXXLDYEKLMTAYN 380 K K E + A K+ A KA + + K A KDPNKPKRPPSAFFVF+EEFRKV+ +EHP KAVSAVGKA G KWK+++D ++YEK M AYN Sbjct: 5 KSKTESKRADPKLAVNKKGAATKARKPAGKG-----KAAKDPNKPKRPPSAFFVFMEEFRKVFNKEHPENKAVSAVGKAAGAKWKTMSDAEKAPYVAKSEKRKVEYEKNMRAYN 113
BLAST of CX286916 vs. ExPASy Swiss-Prot
Match: HMGL_IPONI (HMG1/2-like protein OS=Ipomoea nil PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 6.090e-22 Identity = 52/108 (48.15%), Postives = 67/108 (62.04%), Query Frame = 3 Query: 57 VKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDXXXXXXXXXXXXXXLDYEKLMTAYN 380 +K + +A K +K + K+TK A KDPNKPKRPPSAFFVF+E+FRK YK++HPN K+V+ VGKAGG+KWK LT +YEK + AYN Sbjct: 1 MKGGKSKAKSDNKLAVKKQAADTKKTKK---AVKDPNKPKRPPSAFFVFMEDFRKTYKEKHPNNKSVAVVGKAGGDKWKQLTAAEKAPFISKAEKRKQEYEKNLQAYN 105
BLAST of CX286916 vs. ExPASy Swiss-Prot
Match: MNB1B_MAIZE (DNA-binding protein MNB1B OS=Zea mays GN=MNB1B PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.829e-19 Identity = 54/126 (42.86%), Postives = 70/126 (55.56%), Query Frame = 3 Query: 6 MKVTRGKGAVKKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKS-AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDXXXXXXXXXXXXXXLDYEKLMTAYN 380 MK + KGA K D VK S+ + K K K A KDPNKPKR PSAFFVF+EEFRK +K+++P K+V+AVGKA G++WKSL++ L+Y K + AYN Sbjct: 1 MKGAKSKGAAKADAKLAVK----------------SKGAEKPAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEYNKAIAAYN 110
BLAST of CX286916 vs. ExPASy Swiss-Prot
Match: HMGL_VICFA (HMG1/2-like protein OS=Vicia faba PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.404e-18 Identity = 49/106 (46.23%), Postives = 65/106 (61.32%), Query Frame = 3 Query: 69 EDRAAGKRKAVLKASRSSNKRTKNVKSAK--KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDXXXXXXXXXXXXXXLDYEKLMTAYN 380 E + A + AV K ++ K K K KDPNKPKRPPSAFFVF+ +FR+ YK++HPN K+V+AVGKA GE+WKSL++ +YE + AYN Sbjct: 9 ESKKAETKLAVNKKGAAATKGGKKPAKGKEPKDPNKPKRPPSAFFVFMADFREQYKKDHPNNKSVAAVGKACGEEWKSLSEEEKAPYVDRALKKKEEYEITLQAYN 114
BLAST of CX286916 vs. ExPASy Swiss-Prot
Match: HMGL_WHEAT (HMG1/2-like protein OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 6.968e-18 Identity = 52/125 (41.60%), Postives = 67/125 (53.60%), Query Frame = 3 Query: 6 MKVTRGKGAVKKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDXXXXXXXXXXXXXXLDYEKLMTAYN 380 MK + KGA K D VK + G K K + A KDPNKPKR PSAFFVF+ EFR+ +KQ++P K+V+AVGKA GE+WKSL++ +Y K + AYN Sbjct: 1 MKGAKSKGAAKADAKLAVK-----SKGAEKPAAKGKKGK---------AGKDPNKPKRAPSAFFVFMGEFREEFKQKNPKNKSVAAVGKAAGERWKSLSESEKAPYVAKANKLKGEYNKAIAAYN 111 The following BLAST results are available for this feature:
BLAST of CX286916 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX286916 ID=CX286916; Name=CX286916; organism=Citrus clementina; type=EST; length=604bpback to top |