CX286995

Overview
NameCX286995
Unique NameCX286995
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length595
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX286995 vs. ExPASy Swiss-Prot
Match: Y5713_ARATH (PI-PLC X domain-containing protein At5g67130 OS=Arabidopsis thaliana GN=At5g67130 PE=1 SV=1)

HSP 1 Score: 358.607 bits (919), Expect = 1.341e-98
Identity = 166/198 (83.84%), Postives = 184/198 (92.93%), Query Frame = 2 
Query:    2 TFYNQEDMVTNQLRNGVRGLMLDMYDFNGDIWLCHSFRGQCFNFTAFQPAINTLREVEAFLSQYPTEIVTIIIEDYVQTPKGLTSLFVRAGLDKYFFPVSKMPKKGEDWPTVTEMVQKNYRLLVFSSVASKEAEEGIAYQWRYILENESGDPGVKAGSCPHRKESQPLNSRKASLFLQNYFPTYPVEEDACKEHSTPL 595
            TFYNQED +TNQL+NGVRGLMLDMYDFN DIWLCHS RGQCFNFTAFQPAIN LREVEAFLSQ PTEIVTIIIEDYV  PKGL++LF  AGLDKY+FPVSKMP+KGEDWPTVT+MVQ+N+RLLVF+SVA+KE EEG+AYQWRY++ENESGDPGVK GSCP+RKESQPLNS+ +SLFL NYFPTYPVE+DACKEHS PL
Sbjct:  109 TFYNQEDTITNQLQNGVRGLMLDMYDFNNDIWLCHSLRGQCFNFTAFQPAINILREVEAFLSQNPTEIVTIIIEDYVHRPKGLSTLFANAGLDKYWFPVSKMPRKGEDWPTVTDMVQENHRLLVFTSVAAKEDEEGVAYQWRYMVENESGDPGVKRGSCPNRKESQPLNSKSSSLFLMNYFPTYPVEKDACKEHSAPL 306
The following BLAST results are available for this feature:
BLAST of CX286995 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y5713_ARATH1.341e-9883.84PI-PLC X domain-containing protein At5g67130 OS=Ar... [more]
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Properties
Property NameValue
Genbank descriptionC01003D09SK Veg1 Citrus clementina cDNA clone C01003D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286995 ID=CX286995; Name=CX286995; organism=Citrus clementina; type=EST; length=595bp
GACGTTTTACAATCAAGAAGACATGGTCACTAATCAGTTGAGGAATGGAG
TGAGGGGATTGATGCTGGATATGTACGATTTCAATGGTGATATCTGGCTG
TGCCATTCATTTCGAGGGCAATGTTTCAACTTCACTGCATTTCAACCTGC
AATTAACACTCTGAGGGAAGTGGAAGCATTTTTAAGTCAGTATCCTACCG
AGATTGTAACTATTATAATAGAGGACTATGTTCAAACTCCAAAAGGATTA
ACAAGTTTGTTTGTTCGGGCTGGTTTGGATAAGTACTTCTTCCCTGTGTC
CAAGATGCCAAAGAAAGGTGAAGATTGGCCCACTGTCACAGAAATGGTGC
AAAAGAACTATCGGCTTCTTGTTTTCTCTTCTGTTGCTTCGAAGGAAGCT
GAGGAGGGAATAGCTTATCAATGGAGATACATACTTGAAAATGAATCTGG
AGATCCAGGGGTGAAAGCAGGCTCTTGTCCGCATAGAAAAGAATCACAAC
CTCTGAATTCAAGAAAGGCATCTCTTTTCCTACAAAATTACTTCCCTACA
TATCCAGTTGAAGAGGATGCTTGCAAAGAGCATTCAACTCCACTT
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