CX287104
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287104 vs. ExPASy Swiss-Prot
Match: TIM17_ARATH (Mitochondrial import inner membrane translocase subunit Tim17 OS=Arabidopsis thaliana GN=TIM17 PE=2 SV=2) HSP 1 Score: 237.654 bits (605), Expect = 3.172e-62 Identity = 116/145 (80.00%), Postives = 122/145 (84.14%), Query Frame = 3 Query: 135 MGTPETSREPCPDRILDDXXXXXXXXXXXXXXXHFLKGTYNSPSGARLSGGTQAVRMNAPRVGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGGVLLALIEGAGIMLNKVLSAPQNMPM 569 MGTPETSREPCPDRILDD HF+KGTYNSP G+R GGTQ+V MNAPR GGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQG G+ASRSA+FGGVLLALIEGAGIMLNKVL+ PQNM M Sbjct: 1 MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFIKGTYNSPKGSRFVGGTQSVSMNAPRTGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGAGAASRSAIFGGVLLALIEGAGIMLNKVLAQPQNMMM 145
BLAST of CX287104 vs. ExPASy Swiss-Prot
Match: TI17A_MOUSE (Mitochondrial import inner membrane translocase subunit Tim17-A OS=Mus musculus GN=Timm17a PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.698e-31 Identity = 72/137 (52.55%), Postives = 86/137 (62.77%), Query Frame = 3 Query: 147 ETSREPCPDRILDDXXXXXXXXXXXXXXXHFLKGTYNSPSGA--RLSGGTQAVRMNAPRVGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGGVLLALIEGAGIMLNKVLSA 551 E +REPCP RI+DD KG NSP G RL G A++ AP++GGSFAVWGGLFST DC+MV +R KEDPWNSI +GA TG L+ R G + SA GG+LLALIEGAGI+L + SA Sbjct: 3 EYAREPCPWRIVDDCGGAFTMGTIGGGIFQAFKGFRNSPVGINHRLRGSLTAIKTRAPQLGGSFAVWGGLFSTIDCSMVQIRGKEDPWNSITSGALTGAILAARNGPVAMVGSAAMGGILLALIEGAGILLTRFASA 139
BLAST of CX287104 vs. ExPASy Swiss-Prot
Match: TI17A_RAT (Mitochondrial import inner membrane translocase subunit Tim17-A OS=Rattus norvegicus GN=Timm17a PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 2.896e-31 Identity = 72/137 (52.55%), Postives = 85/137 (62.04%), Query Frame = 3 Query: 147 ETSREPCPDRILDDXXXXXXXXXXXXXXXHFLKGTYNSPSGA--RLSGGTQAVRMNAPRVGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGGVLLALIEGAGIMLNKVLSA 551 E +REPCP RI+DD KG NSP G RL G A++ AP++GGSFAVWGGLFST DC MV +R KEDPWNSI +GA TG L+ R G + SA GG+LLALIEGAGI+L + SA Sbjct: 3 EYAREPCPWRIVDDCGGAFTMGTIGGGIFQAFKGFRNSPVGVNHRLRGSLTAIKTRAPQLGGSFAVWGGLFSTIDCGMVQIRGKEDPWNSITSGALTGAILAARNGPVAMVGSAAMGGILLALIEGAGILLTRFASA 139
BLAST of CX287104 vs. ExPASy Swiss-Prot
Match: TI17A_DROME (Probable mitochondrial import inner membrane translocase subunit Tim17 1 OS=Drosophila melanogaster GN=Tim17b1 PE=2 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 3.782e-31 Identity = 70/132 (53.03%), Postives = 85/132 (64.39%), Query Frame = 3 Query: 147 ETSREPCPDRILDDXXXXXXXXXXXXXXXHFLKGTYNSPSGA--RLSGGTQAVRMNAPRVGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGGVLLALIEGAGIMLN 536 E REPCP RI++D +KG N+PSG RLSGG AVR + VGG+FAVWG FS DC++VY R+KEDPWN+II+GA TGG L+ R GL S SAL GG LLALIEG GI+++ Sbjct: 3 EYGREPCPFRIVEDCGGAFAMGALGGGAFQAIKGFRNAPSGLGYRLSGGLAAVRARSGLVGGNFAVWGATFSAIDCSLVYFRKKEDPWNAIISGATTGGILAARTGLTSMLSSALVGGALLALIEGVGIVVS 134
BLAST of CX287104 vs. ExPASy Swiss-Prot
Match: TI17A_HUMAN (Mitochondrial import inner membrane translocase subunit Tim17-A OS=Homo sapiens GN=TIMM17A PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 4.940e-31 Identity = 71/137 (51.82%), Postives = 86/137 (62.77%), Query Frame = 3 Query: 147 ETSREPCPDRILDDXXXXXXXXXXXXXXXHFLKGTYNSPSGA--RLSGGTQAVRMNAPRVGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGGVLLALIEGAGIMLNKVLSA 551 E +REPCP RI+DD +KG NSP G RL G A++ AP++GGSFAVWGGLFS DC+MV +R KEDPWNSI +GA TG L+ R G + SA GG+LLALIEGAGI+L + SA Sbjct: 3 EYAREPCPWRIVDDCGGAFTMGTIGGGIFQAIKGFRNSPVGVNHRLRGSLTAIKTRAPQLGGSFAVWGGLFSMIDCSMVQVRGKEDPWNSITSGALTGAILAARNGPVAMVGSAAMGGILLALIEGAGILLTRFASA 139
BLAST of CX287104 vs. ExPASy Swiss-Prot
Match: TI17B_HUMAN (Mitochondrial import inner membrane translocase subunit Tim17-B OS=Homo sapiens GN=TIMM17B PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 6.451e-31 Identity = 70/133 (52.63%), Postives = 85/133 (63.91%), Query Frame = 3 Query: 147 ETSREPCPDRILDDXXXXXXXXXXXXXXXHFLKGTYNSPSGAR--LSGGTQAVRMNAPRVGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGGVLLALIEGAGIMLNK 539 E +REPCP RI+DD +KG N+P G R L G AVR+ AP++GGSFAVWGGLFST DC +V LR KEDPWNSI +GA TG L+ R G + SA+ GG+LLALIEG GI+L + Sbjct: 3 EYAREPCPWRIVDDCGGAFTMGVIGGGVFQAIKGFRNAPVGIRHRLRGSANAVRIRAPQIGGSFAVWGGLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSGPLAMVGSAMMGGILLALIEGVGILLTR 135
BLAST of CX287104 vs. ExPASy Swiss-Prot
Match: TI17B_MOUSE (Mitochondrial import inner membrane translocase subunit Tim17-B OS=Mus musculus GN=Timm17b PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 2.452e-30 Identity = 69/133 (51.88%), Postives = 84/133 (63.16%), Query Frame = 3 Query: 147 ETSREPCPDRILDDXXXXXXXXXXXXXXXHFLKGTYNSPSGAR--LSGGTQAVRMNAPRVGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGGVLLALIEGAGIMLNK 539 E +REPCP RI+DD +KG N+P G R G AVR+ AP++GGSFAVWGGLFST DC +V LR KEDPWNSI +GA TG L+ R G + SA+ GG+LLALIEG GI+L + Sbjct: 3 EYAREPCPWRIVDDCGGAFTMGVIGGGVFQAIKGFRNAPVGIRHRFRGSVNAVRIRAPQIGGSFAVWGGLFSTIDCGLVRLRGKEDPWNSISSGALTGAVLAARSGPLAMVGSAMMGGILLALIEGVGILLTR 135
BLAST of CX287104 vs. ExPASy Swiss-Prot
Match: TI17B_BOVIN (Mitochondrial import inner membrane translocase subunit Tim17-B OS=Bos taurus GN=TIMM17B PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 7.133e-30 Identity = 69/133 (51.88%), Postives = 84/133 (63.16%), Query Frame = 3 Query: 147 ETSREPCPDRILDDXXXXXXXXXXXXXXXHFLKGTYNSPSGAR--LSGGTQAVRMNAPRVGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGGVLLALIEGAGIMLNK 539 E +REPCP RI+DD +KG N+P G R L G AVR+ AP++GGSFAVWGGLFST DC +V LR KEDPWNSI +GA TG L+ R + SA+ GG+LLALIEG GI+L + Sbjct: 3 EYAREPCPWRIVDDCGGAFTMGVIGGGVFQAIKGFRNAPVGMRHRLRGSVNAVRIRAPQIGGSFAVWGGLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSVPLAMVGSAMMGGILLALIEGVGILLTR 135
BLAST of CX287104 vs. ExPASy Swiss-Prot
Match: TI17C_DROME (Probable mitochondrial import inner membrane translocase subunit Tim17 3 OS=Drosophila melanogaster GN=Tim17a1 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.540e-29 Identity = 64/137 (46.72%), Postives = 87/137 (63.50%), Query Frame = 3 Query: 147 ETSREPCPDRILDDXXXXXXXXXXXXXXXHFLKGTYNSPSGA--RLSGGTQAVRMNAPRVGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGGVLLALIEGAGIMLNKVLSA 551 E +R+PCP RI++D FLKG N+P+G RL GG V+M P + GSFAVWG FST DC +V+ RQ+ED WNSI++GAATGG L+ R G+ + + SAL G ++LA+IEGAG + + +A Sbjct: 2 EYNRQPCPIRIVEDCGCAFMMGTIGGSLFEFLKGFRNAPTGLQRRLYGGIDLVKMRTPSIAGSFAVWGATFSTVDCALVHYRQREDAWNSILSGAATGGILAARNGIRAMANSALVGCLVLAMIEGAGAAVATINAA 138
BLAST of CX287104 vs. ExPASy Swiss-Prot
Match: TI17D_DROME (Probable mitochondrial import inner membrane translocase subunit Tim17 4 OS=Drosophila melanogaster GN=Tim17a2 PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.757e-28 Identity = 60/128 (46.88%), Postives = 83/128 (64.84%), Query Frame = 3 Query: 147 ETSREPCPDRILDDXXXXXXXXXXXXXXXHFLKGTYNSPSGAR--LSGGTQAVRMNAPRVGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGGVLLALIEGAG 524 E +R+PCP RI++D +LKG N+PSG R L GG ++VR+ P + GSFA+WG FST DC MV RQ+ED WN+I++GAATGG L+ R G+ + + SA G ++LA++EGAG Sbjct: 2 EYNRQPCPIRIVEDCGCAFMMGTMGGSLFQYLKGFRNAPSGLRRGLHGGIESVRLRTPAIAGSFAIWGATFSTVDCVMVSYRQREDSWNAIVSGAATGGILAARNGIRAMANSAFVGCLVLAMLEGAG 129 The following BLAST results are available for this feature:
BLAST of CX287104 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287104 ID=CX287104; Name=CX287104; organism=Citrus clementina; type=EST; length=576bpback to top |