CX287164

Overview
NameCX287164
Unique NameCX287164
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length593
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig87 contig Ccv1_Contig87:348..940. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX287164 vs. ExPASy Swiss-Prot
Match: MAOX_VITVI (NADP-dependent malic enzyme OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 354.755 bits (909), Expect = 1.914e-97
Identity = 175/197 (88.83%), Postives = 187/197 (94.92%), Query Frame = 2
Query:    2 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRKISANIAA 592
            QTK P+EETRKKI LVDSKGLIV SRKDSLQ FKKPWAHEHEPV +LLDAVKVIKPT+LIGSSGVG+ FTKEVIEAMAS NEKPLILALSNPTSQSECTAEEAYTW++GRAIFASGSPFDP EYNGK FVPGQANNAYIFPG G+GLVISGAIRVHD+MLLAASEALA+QVT+ENF+KGLIYPPFSNIRKISA+IAA
Sbjct:  357 QTKCPIEETRKKIWLVDSKGLIVGSRKDSLQQFKKPWAHEHEPVKDLLDAVKVIKPTVLIGSSGVGKAFTKEVIEAMASCNEKPLILALSNPTSQSECTAEEAYTWTQGRAIFASGSPFDPVEYNGKTFVPGQANNAYIFPGLGMGLVISGAIRVHDEMLLAASEALARQVTQENFDKGLIYPPFSNIRKISAHIAA 553          
BLAST of CX287164 vs. ExPASy Swiss-Prot
Match: MAOX_PHAVU (NADP-dependent malic enzyme OS=Phaseolus vulgaris GN=ME1 PE=2 SV=1)

HSP 1 Score: 347.051 bits (889), Expect = 3.991e-95
Identity = 171/197 (86.80%), Postives = 184/197 (93.40%), Query Frame = 2
Query:    2 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRKISANIAA 592
            QTKAPVEETRKKI LVDSKGLIVSSR +SLQ FKKPWAHEHEPV  LL+AVK IKPT+LIGSSG G+TFTKEV+E MAS NEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDP EY GK+FVPGQANNAYIFPGFGLGL++SGAIRV D+MLLAASEALA QV+EEN++KGLIYPPF+NIRKISANIAA
Sbjct:  355 QTKAPVEETRKKIWLVDSKGLIVSSRLESLQQFKKPWAHEHEPVKGLLEAVKAIKPTVLIGSSGAGKTFTKEVVETMASLNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPVEYEGKLFVPGQANNAYIFPGFGLGLIMSGAIRVRDEMLLAASEALAAQVSEENYDKGLIYPPFTNIRKISANIAA 551          
BLAST of CX287164 vs. ExPASy Swiss-Prot
Match: MAOC_FLAPR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria pringlei GN=MODA PE=2 SV=1)

HSP 1 Score: 340.887 bits (873), Expect = 2.860e-93
Identity = 165/197 (83.76%), Postives = 184/197 (93.40%), Query Frame = 2
Query:    2 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRKISANIAA 592
            QT AP+EETRKKI LVDSKGLIV SR DSLQHFKKPWAH+HEPVN  LDAVK IKPT+LIGSSG G+TFTKEV+EAM+SFNEKP+ILALSNPTSQSECTAE+AYTWS+GR IFASGSPF P EYNGKV+V GQ+NNAYIFPGFGLGL+ISGAIRVHD+MLLAASEALA+QVT+E+F+ GLIYPPF+NIRKISA+IAA
Sbjct:  413 QTNAPLEETRKKIWLVDSKGLIVRSRLDSLQHFKKPWAHDHEPVNKFLDAVKAIKPTVLIGSSGAGQTFTKEVVEAMSSFNEKPIILALSNPTSQSECTAEQAYTWSEGRTIFASGSPFAPVEYNGKVYVSGQSNNAYIFPGFGLGLIISGAIRVHDEMLLAASEALAEQVTQEHFDNGLIYPPFTNIRKISAHIAA 609          
BLAST of CX287164 vs. ExPASy Swiss-Prot
Match: MAOX_POPTR (NADP-dependent malic enzyme OS=Populus trichocarpa PE=2 SV=3)

HSP 1 Score: 333.569 bits (854), Expect = 4.566e-91
Identity = 164/197 (83.25%), Postives = 178/197 (90.36%), Query Frame = 2
Query:    2 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRKISANIAA 592
            ++K P+EETRKKI L DSKGLIVSSRK+SLQHFKKPWAHEHEPV  LL+ VK IKP +LIG+SGVG+TFTKEVIEAMASFNEKPLILALSNPTSQSECTA+EAYTW+KG+AIFASGSPFDP EY GKVFVPGQ+NNAYIFPG GLGLVISGAIRVHDDMLLAA+EALA Q+ EE   KGLIYPP SNIRKIS  IAA
Sbjct:  357 RSKTPLEETRKKIWLTDSKGLIVSSRKESLQHFKKPWAHEHEPVKGLLEVVKAIKPIVLIGTSGVGKTFTKEVIEAMASFNEKPLILALSNPTSQSECTAQEAYTWTKGKAIFASGSPFDPVEYEGKVFVPGQSNNAYIFPGLGLGLVISGAIRVHDDMLLAAAEALAGQIKEEYLAKGLIYPPLSNIRKISVQIAA 553          
BLAST of CX287164 vs. ExPASy Swiss-Prot
Match: MAOC_ORYSJ (NADP-dependent malic enzyme, chloroplastic OS=Oryza sativa subsp. japonica GN=ME6 PE=2 SV=2)

HSP 1 Score: 332.413 bits (851), Expect = 1.017e-90
Identity = 159/197 (80.71%), Postives = 181/197 (91.88%), Query Frame = 2
Query:    2 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRKISANIAA 592
            QTKAP+EE RKK+ L+DSKGLIV+SRK+SLQ FKKPWAHEHEPV  LLDAV+ IKPT+LIG+SGVG+TFTKEVIEAMASFNE+P+I +LSNPTS SECTAEEAY WS+GRA+FASGSPFDP EYNGK+ VPGQ+NNAYIFPGFGLG+VISGA+RVH+DMLLAASE LA Q T+ENFEKG I+PPF+NIRKISA IAA
Sbjct:  405 QTKAPIEECRKKVWLLDSKGLIVNSRKESLQAFKKPWAHEHEPVTTLLDAVQSIKPTVLIGTSGVGKTFTKEVIEAMASFNERPVIFSLSNPTSHSECTAEEAYNWSQGRAVFASGSPFDPVEYNGKIHVPGQSNNAYIFPGFGLGVVISGAVRVHEDMLLAASETLADQATQENFEKGSIFPPFTNIRKISARIAA 601          
BLAST of CX287164 vs. ExPASy Swiss-Prot
Match: MAOC_FLATR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria trinervia GN=MOD1 PE=2 SV=1)

HSP 1 Score: 330.872 bits (847), Expect = 2.960e-90
Identity = 158/197 (80.20%), Postives = 182/197 (92.39%), Query Frame = 2
Query:    2 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRKISANIAA 592
            QT  P+EE+RKK+ LVDSKGLIV SR DSLQHFKKPWAH+HEPVN  LDA+K I+PT+LIGSSG G+TFTKEV+E M+S NEKP+ILALSNPTSQSECTAE+AYTWS+GRAIFASGSPF P EYNGK++V GQANNAYIFPGFGLGL+ISGAIRVHDDMLLAASEA A+QVT+E+F+KGLI+PPF++IRKISA+IAA
Sbjct:  414 QTNIPLEESRKKVWLVDSKGLIVRSRLDSLQHFKKPWAHDHEPVNEFLDAIKTIRPTVLIGSSGTGQTFTKEVVETMSSLNEKPIILALSNPTSQSECTAEQAYTWSEGRAIFASGSPFKPVEYNGKLYVSGQANNAYIFPGFGLGLIISGAIRVHDDMLLAASEAPAEQVTQEHFDKGLIFPPFTSIRKISAHIAA 610          
BLAST of CX287164 vs. ExPASy Swiss-Prot
Match: MAOX_MESCR (NADP-dependent malic enzyme OS=Mesembryanthemum crystallinum GN=MOD1 PE=2 SV=1)

HSP 1 Score: 323.168 bits (827), Expect = 6.172e-88
Identity = 157/197 (79.70%), Postives = 177/197 (89.85%), Query Frame = 2
Query:    2 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRKISANIAA 592
            +TKAPVE+ RKKI LVDSKGL+VSSRK++LQ FK PWAHEHEP+  L+DAV+ IKPT+LIG+SG G+ FTKEV+EAMA+ N KPLILALSNPTSQSECTAEEAYTWS+G AIFASGSPFDP EY G+ FVPGQANNAYIFPGFGLGL++ GAIRVHDDMLLAASEALA QVT E+F KGLIYPPF +IRKISA+IAA
Sbjct:  351 KTKAPVEQMRKKIWLVDSKGLVVSSRKETLQQFKLPWAHEHEPITTLIDAVQAIKPTVLIGTSGKGKQFTKEVVEAMANINAKPLILALSNPTSQSECTAEEAYTWSQGHAIFASGSPFDPVEYEGRTFVPGQANNAYIFPGFGLGLIMCGAIRVHDDMLLAASEALASQVTGEHFIKGLIYPPFKDIRKISAHIAA 547          
BLAST of CX287164 vs. ExPASy Swiss-Prot
Match: MAOC_SOLLC (NADP-dependent malic enzyme, chloroplastic (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 322.013 bits (824), Expect = 1.375e-87
Identity = 156/196 (79.59%), Postives = 176/196 (89.80%), Query Frame = 2
Query:    2 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRKISANIA 589
            QT  P+EETRKKI +VDSKGLIV SR + LQHFK+PWAH+HEPV  L++AVK IKPT+LIGSSG GRTFTKEV++AMA+FNEKP+I ALSNPTSQSECTAEEAY+WS+GRAIFASGSPF P EYNGKV+  GQANNAYIFPGFGLGL+ISGAIRVHDDMLL ASEALA +V++ENFEKG   PPFSNIRKISA+IA
Sbjct:  340 QTGIPLEETRKKIWMVDSKGLIVKSRMEMLQHFKRPWAHDHEPVQELVNAVKSIKPTVLIGSSGAGRTFTKEVVQAMATFNEKPIIFALSNPTSQSECTAEEAYSWSEGRAIFASGSPFAPVEYNGKVYASGQANNAYIFPGFGLGLIISGAIRVHDDMLLVASEALADEVSQENFEKGTHIPPFSNIRKISAHIA 535          
BLAST of CX287164 vs. ExPASy Swiss-Prot
Match: MAOC_MAIZE (NADP-dependent malic enzyme, chloroplastic OS=Zea mays GN=MOD1 PE=1 SV=1)

HSP 1 Score: 319.316 bits (817), Expect = 8.912e-87
Identity = 153/197 (77.66%), Postives = 177/197 (89.85%), Query Frame = 2
Query:    2 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRKISANIAA 592
            QT AP+EE RKK+ LVDSKGLIV SRK SLQ FKKPWAHEHEP+  L DAV+ IKPT+LIG+SGVGRTFTKE+IEAM+SFNE+P+I +LSNPTS SECTAE+AYTWS+GR+IFASGSPF P EY GK FVPGQ+NNAYIFPG GLGLVISGA+RVH+DMLLAAS+ALA Q T++NFEKG I+PPF++IRKISA+IAA
Sbjct:  402 QTNAPIEECRKKVWLVDSKGLIVDSRKGSLQPFKKPWAHEHEPLKTLYDAVQSIKPTVLIGTSGVGRTFTKEIIEAMSSFNERPIIFSLSNPTSHSECTAEQAYTWSQGRSIFASGSPFAPVEYEGKTFVPGQSNNAYIFPGLGLGLVISGAVRVHEDMLLAASKALADQATQDNFEKGSIFPPFTSIRKISAHIAA 598          
BLAST of CX287164 vs. ExPASy Swiss-Prot
Match: MAOX_ANAPL (NADP-dependent malic enzyme OS=Anas platyrhynchos GN=ME1 PE=1 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.029e-50
Identity = 98/191 (51.31%), Postives = 135/191 (70.68%), Query Frame = 2
Query:   20 EETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRKISANIA 589
            E   K+I +VDSKGLIV  R  SL   K  +AHEH  + NL D VK IKP++LIG + +G  FTKE+++ MA+FN++P+I ALSNPTS++ECTAE+ Y +++GR IFASGSPFDP    NGK   PGQ NN+Y+FPG  LG++  G   + +D+ L  +E +A+QV+EEN ++G +YPP   I+ +S  IA
Sbjct:  314 EAAVKRIWMVDSKGLIVKGRA-SLTAEKTRFAHEHAEMKNLEDIVKDIKPSVLIGVAAIGGAFTKEILQDMAAFNKRPIIFALSNPTSKAECTAEQCYKYTEGRGIFASGSPFDPVTLPNGKTLYPGQGNNSYVFPGVALGVIACGLKHIGEDVFLTTAEVIAEQVSEENLQEGRLYPPLVTIQHVSLKIA 503          
The following BLAST results are available for this feature:
BLAST of CX287164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAOX_VITVI1.914e-9788.83NADP-dependent malic enzyme OS=Vitis vinifera PE=2... [more]
MAOX_PHAVU3.991e-9586.80NADP-dependent malic enzyme OS=Phaseolus vulgaris ... [more]
MAOC_FLAPR2.860e-9383.76NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOX_POPTR4.566e-9183.25NADP-dependent malic enzyme OS=Populus trichocarpa... [more]
MAOC_ORYSJ1.017e-9080.71NADP-dependent malic enzyme, chloroplastic OS=Oryz... [more]
MAOC_FLATR2.960e-9080.20NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOX_MESCR6.172e-8879.70NADP-dependent malic enzyme OS=Mesembryanthemum cr... [more]
MAOC_SOLLC1.375e-8779.59NADP-dependent malic enzyme, chloroplastic (Fragme... [more]
MAOC_MAIZE8.912e-8777.66NADP-dependent malic enzyme, chloroplastic OS=Zea ... [more]
MAOX_ANAPL1.029e-5051.31NADP-dependent malic enzyme OS=Anas platyrhynchos ... [more]

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Properties
Property NameValue
Genbank descriptionC01005D06SK Veg1 Citrus clementina cDNA clone C01005D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287164 ID=CX287164; Name=CX287164; organism=Citrus clementina; type=EST; length=593bp
GCAGACTAAAGCTCCTGTGGAAGAGACCCGGAAGAAGATATGTCTTGTAG
ACTCAAAGGGACTGATAGTCAGCTCCCGGAAAGATTCACTTCAACACTTC
AAGAAGCCTTGGGCTCATGAACATGAGCCTGTCAACAATCTCTTAGATGC
TGTCAAGGTAATCAAGCCAACAATTTTGATTGGATCATCTGGAGTTGGAA
GAACTTTTACAAAAGAAGTAATCGAGGCCATGGCCTCCTTCAATGAGAAA
CCTCTCATCCTGGCTCTCTCCAACCCAACCTCACAGTCAGAATGTACAGC
TGAAGAAGCTTACACTTGGAGTAAGGGTCGTGCAATTTTCGCTAGTGGAA
GTCCATTTGATCCTTTTGAATACAATGGAAAAGTTTTTGTTCCTGGCCAG
GCCAACAATGCTTACATCTTCCCTGGATTTGGTTTGGGTTTGGTCATCTC
TGGAGCAATTCGGGTACATGACGACATGCTTCTGGCAGCCTCGGAAGCCT
TGGCAAAACAAGTGACAGAAGAGAACTTTGAGAAGGGATTGATCTACCCA
CCATTTTCTAATATTAGAAAAATTTCAGCCAATATAGCTGCTA
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