CX287340

Overview
NameCX287340
Unique NameCX287340
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length415
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 231.876 bits (590), Expect = 7.900e-61
Identity = 111/137 (81.02%), Postives = 125/137 (91.24%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVAL 413
            HEGLEPKVVHRDIKSSNILLD+QWN K+SDFGLAKLLG+E SYVTTRVMGTFGYVAPEYA TGMLNE+SD+YSFGILIME+I+GRNPVDYSRP GE NLV+WLK+MV NR +E V+DP++ E P S+ALKR LLVAL
Sbjct:  269 HEGLEPKVVHRDIKSSNILLDRQWNAKVSDFGLAKLLGSESSYVTTRVMGTFGYVAPEYACTGMLNEKSDIYSFGILIMEIITGRNPVDYSRPQGETNLVDWLKSMVGNRRSEEVVDPKIPEPPSSKALKRVLLVAL 405          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 7.918e-53
Identity = 97/137 (70.80%), Postives = 118/137 (86.13%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVAL 413
            HE +EPKVVHRDIK+SNIL+D ++N KLSDFGLAKLL +  S++TTRVMGTFGYVAPEYA+TG+LNE+SD+YSFG+L++E I+GR+PVDY RP  EVNLVEWLK MV  R AE V+DPRL+ +P   ALKRALLV+L
Sbjct:  298 HEAIEPKVVHRDIKASNILIDDEFNAKLSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDPRLEPRPSKSALKRALLVSL 434          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 4.086e-33
Identity = 73/138 (52.90%), Postives = 99/138 (71.74%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKL-LGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNA-EGVLDPRLQEKPCSRALKRALLVA 410
            H+   P V++RD KSSNILLD+ ++PKLSDFGLAKL    ++S+V+TRVMGT+GY APEYA TG L  +SDVYSFG++ +E+I+GR  +D   P GE NLV W + +  +R     + DPRL+ +  +RAL +AL VA
Sbjct:  202 HDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSEMPHGEQNLVAWARPLFNDRRKFIKLADPRLKGRFPTRALYQALAVA 339          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 7.705e-32
Identity = 72/134 (53.73%), Postives = 102/134 (76.12%), Query Frame = 3
Query:   15 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAK--LLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTN-RNAEGVLDPRLQ-EKPCSRALKRALL 404
            +P+V++RD K+SNILLD  +N KLSDFGLA+   +G + S+V+TRVMGT GY APEY +TG L+ +SDVYSFG++++E++SGR  +D ++P GE NLV+W +  +TN R    V+DPRLQ +   +RALK A+L
Sbjct:  196 QPQVIYRDFKASNILLDSNYNAKLSDFGLARDGPMG-DNSHVSTRVMGTQGYAAPEYLATGHLSVKSDVYSFGVVLLELLSGRRAIDKNQPVGEHNLVDWARPYLTNKRRLLRVMDPRLQGQYSLTRALKIAVL 328          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 1.314e-31
Identity = 66/121 (54.55%), Postives = 92/121 (76.03%), Query Frame = 3
Query:   15 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKL-LGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTN-RNAEGVLDPRLQEK 371
            E  V++RD K+SNILLD ++N KLSDFGLAK     ++S+V+TR+MGT+GY APEY +TG L  +SDVYS+G++++EV+SGR  VD +RPPGE  LVEW + ++ N R    V+D RLQ++
Sbjct:  197 ETSVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRRAVDKNRPPGEQKLVEWARPLLANKRKLFRVIDNRLQDQ 317          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 2.928e-31
Identity = 69/122 (56.56%), Postives = 93/122 (76.23%), Query Frame = 3
Query:   15 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAK--LLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKT-MVTNRNAEGVLDPRLQEK 371
            E +V++RD K+SNILLD ++N KLSDFGLAK   +G ++S+V+TRVMGT GY APEY +TG L  +SDVYSFG++++E++SGR  VD +RP GE NLVEW K  +V  R    V+D RLQ++
Sbjct:  196 ETRVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPIG-DKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERNLVEWAKPYLVNKRKIFRVIDNRLQDQ 316          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 3.824e-31
Identity = 71/123 (57.72%), Postives = 94/123 (76.42%), Query Frame = 3
Query:   21 KVVHRDIKSSNILLDKQWNPKLSDFGLAK--LLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTN-RNAEGVLDPRL--QEKP 374
            KV++RDIK+SNILLD  +N KLSDFGLA+   +G E+SYV+TRVMGTFGY APEY STG LN RSDVYSFG++++E++ GR  +D++RP  E NLV+W +  +T+ R    ++D RL  Q KP
Sbjct:  192 KVIYRDIKASNILLDSDFNAKLSDFGLARDGPMG-EQSYVSTRVMGTFGYAAPEYVSTGHLNARSDVYSFGVVLLELLCGRQALDHNRPAKEQNLVDWARPYLTSRRKVLLIVDTRLNSQYKP 313          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 6.523e-31
Identity = 60/121 (49.59%), Postives = 85/121 (70.25%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQ 365
            H    P+++HRDIKSSNILLD     ++SDFGLAKLL  E S++TT V GTFGY+APEY  +G   E++DVYSFG+L++EV+SG+ P D S     +N+V WLK +++ +    ++DP  +
Sbjct:  418 HHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNVVGWLKFLISEKRPRDIVDPNCE 538          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 4.228e-30
Identity = 69/134 (51.49%), Postives = 96/134 (71.64%), Query Frame = 3
Query:   21 KVVHRDIKSSNILLDKQWNPKLSDFGLAK--LLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTN-RNAEGVLDPRLQEKPCSRALKRALLVAL 413
            KV++RDIK+SNILLD  +N KLSDFGLA+   +G + SYV+TRVMGT+GY APEY S+G LN RSDVYSFG+L++E++SG+  +D++RP  E NLV+W +  +T+ R    ++D RL  +       R   VA+
Sbjct:  197 KVIYRDIKASNILLDADYNAKLSDFGLARDGPMG-DLSYVSTRVMGTYGYAAPEYMSSGHLNARSDVYSFGVLLLEILSGKRALDHNRPAKEENLVDWARPYLTSKRKVLLIVDNRLDTQYLPEEAVRMASVAV 329          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 2.741e-29
Identity = 59/117 (50.43%), Postives = 82/117 (70.09%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLD 353
            H    P+++HRDIKSSNILLD     ++SDFGLAKLL  E S++TT V GTFGY+APEY  +G   E++DVYSFG+L++EV+SG+ P D S      N+V WL  +++   A+ ++D
Sbjct:  416 HHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKLPTDASFIEKGFNIVGWLNFLISENRAKEIVD 532          
The following BLAST results are available for this feature:
BLAST of CX287340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 289
Match NameE-valueIdentityDescription
Y1154_ARATH7.900e-6181.02Probable serine/threonine-protein kinase At1g01540... [more]
Y2296_ARATH7.918e-5370.80Probable receptor-like protein kinase At2g42960 OS... [more]
PBS1_ARATH4.086e-3352.90Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
NAK_ARATH7.705e-3253.73Probable serine/threonine-protein kinase NAK OS=Ar... [more]
APK1B_ARATH1.314e-3154.55Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
APK1A_ARATH2.928e-3156.56Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
Y3545_ARATH3.824e-3157.72Probable receptor-like protein kinase At3g55450 OS... [more]
FEI1_ARATH6.523e-3149.59LRR receptor-like serine/threonine-protein kinase ... [more]
BIK1_ARATH4.228e-3051.49Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
FEI2_ARATH2.741e-2950.43LRR receptor-like serine/threonine-protein kinase ... [more]

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Properties
Property NameValue
Genbank descriptionC01008E02SK Veg1 Citrus clementina cDNA clone C01008E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287340 ID=CX287340; Name=CX287340; organism=Citrus clementina; type=EST; length=415bp
TGCATGAGGGGCTTGAACCAAAGGTTGTTCACCGTGACATCAAGTCAAGC
AACATTTTGCTCGATAAGCAGTGGAATCCGAAATTATCCGATTTTGGCCT
AGCAAAGCTTTTGGGCGCAGAGAGGAGCTACGTGACAACTCGTGTGATGG
GAACATTCGGGTATGTGGCACCAGAATATGCTAGCACTGGGATGTTGAAT
GAAAGAAGCGATGTATACAGTTTTGGTATCCTTATCATGGAAGTAATTTC
TGGTAGAAATCCAGTGGATTACAGCCGCCCTCCAGGGGAGGTGAATTTAG
TTGAGTGGCTCAAAACAATGGTCACAAATCGCAATGCAGAGGGTGTTTTG
GATCCTAGGTTGCAAGAGAAGCCTTGTTCAAGGGCATTGAAGCGTGCTCT
TTTAGTAGCTTTACG
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