CX287343
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287343 vs. ExPASy Swiss-Prot
Match: SMT3_ARATH (Ubiquitin-like protein SMT3 OS=Arabidopsis thaliana GN=SMT3 PE=1 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 1.114e-38 Identity = 77/84 (91.67%), Postives = 80/84 (95.24%), Query Frame = 1 Query: 157 QEEDKKPVDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAML 408 QEEDKKP D AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV++NSIAFLFDGRRLR EQTPDEL+MEDGDEIDAML Sbjct: 5 QEEDKKPGDGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNSIAFLFDGRRLRAEQTPDELDMEDGDEIDAML 88
BLAST of CX287343 vs. ExPASy Swiss-Prot
Match: SMT3_ORYSJ (Ubiquitin-like protein SMT3 OS=Oryza sativa subsp. japonica GN=SMT3 PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.043e-36 Identity = 76/86 (88.37%), Postives = 79/86 (91.86%), Query Frame = 1 Query: 160 EEDKKPVDQS---AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAML 408 EEDKKP AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV++N+IAFLFDGRRLRGEQTPDELEMEDGDEIDAML Sbjct: 6 EEDKKPAGGEGGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNAIAFLFDGRRLRGEQTPDELEMEDGDEIDAML 91
BLAST of CX287343 vs. ExPASy Swiss-Prot
Match: PMT3_SCHPO (Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe GN=pmt3 PE=1 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 9.479e-22 Identity = 48/83 (57.83%), Postives = 63/83 (75.90%), Query Frame = 1 Query: 160 EEDKKPVDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAML 408 ++D KP + HINLKV GQD NEVFF+IK++T+ KLM YC RQ +NS+ FL DG R+R +QTP EL+MEDGD+I+A+L Sbjct: 26 QQDVKP--STEHINLKVVGQDNNEVFFKIKKTTEFSKLMKIYCARQGKSMNSLRFLVDGERIRPDQTPAELDMEDGDQIEAVL 106
BLAST of CX287343 vs. ExPASy Swiss-Prot
Match: SUMO3_XENTR (Small ubiquitin-related modifier 3 OS=Xenopus tropicalis GN=sumo3 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 7.029e-17 Identity = 44/82 (53.66%), Postives = 56/82 (68.29%), Query Frame = 1 Query: 157 QEEDKKPVD-QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEID 399 +E+ K+ V ++ HINLKV GQDG+ V F+IKR T L KLM AYCDRQ + + I F FDG+ + TP +LEMED D ID Sbjct: 3 EEKPKEGVKTENDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCDRQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTID 84
BLAST of CX287343 vs. ExPASy Swiss-Prot
Match: SUMO3_XENLA (Small ubiquitin-related modifier 3 OS=Xenopus laevis GN=sumo3 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 7.029e-17 Identity = 44/82 (53.66%), Postives = 56/82 (68.29%), Query Frame = 1 Query: 157 QEEDKKPVD-QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEID 399 +E+ K+ V ++ HINLKV GQDG+ V F+IKR T L KLM AYCDRQ + + I F FDG+ + TP +LEMED D ID Sbjct: 3 EEKPKEGVKTENDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCDRQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTID 84
BLAST of CX287343 vs. ExPASy Swiss-Prot
Match: SUMO2_RAT (Small ubiquitin-related modifier 2 OS=Rattus norvegicus GN=Sumo2 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.566e-16 Identity = 43/83 (51.81%), Postives = 54/83 (65.06%), Query Frame = 1 Query: 166 DKKP-----VDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEID 399 D+KP + + HINLKV GQDG+ V F+IKR T L KLM AYC+RQ + + I F FDG+ + TP +LEMED D ID Sbjct: 3 DEKPKEGVKTENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTID 85
BLAST of CX287343 vs. ExPASy Swiss-Prot
Match: SUMO2_PIG (Small ubiquitin-related modifier 2 OS=Sus scrofa GN=SUMO2 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.566e-16 Identity = 43/83 (51.81%), Postives = 54/83 (65.06%), Query Frame = 1 Query: 166 DKKP-----VDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEID 399 D+KP + + HINLKV GQDG+ V F+IKR T L KLM AYC+RQ + + I F FDG+ + TP +LEMED D ID Sbjct: 3 DEKPKEGVKTENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTID 85
BLAST of CX287343 vs. ExPASy Swiss-Prot
Match: SUMO2_MOUSE (Small ubiquitin-related modifier 2 OS=Mus musculus GN=Sumo2 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.566e-16 Identity = 43/83 (51.81%), Postives = 54/83 (65.06%), Query Frame = 1 Query: 166 DKKP-----VDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEID 399 D+KP + + HINLKV GQDG+ V F+IKR T L KLM AYC+RQ + + I F FDG+ + TP +LEMED D ID Sbjct: 3 DEKPKEGVKTENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTID 85
BLAST of CX287343 vs. ExPASy Swiss-Prot
Match: SUMO2_MACFA (Small ubiquitin-related modifier 2 OS=Macaca fascicularis GN=SUMO2 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.566e-16 Identity = 43/83 (51.81%), Postives = 54/83 (65.06%), Query Frame = 1 Query: 166 DKKP-----VDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEID 399 D+KP + + HINLKV GQDG+ V F+IKR T L KLM AYC+RQ + + I F FDG+ + TP +LEMED D ID Sbjct: 3 DEKPKEGVKTENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTID 85
BLAST of CX287343 vs. ExPASy Swiss-Prot
Match: SUMO2_HUMAN (Small ubiquitin-related modifier 2 OS=Homo sapiens GN=SUMO2 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.566e-16 Identity = 43/83 (51.81%), Postives = 54/83 (65.06%), Query Frame = 1 Query: 166 DKKP-----VDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEID 399 D+KP + + HINLKV GQDG+ V F+IKR T L KLM AYC+RQ + + I F FDG+ + TP +LEMED D ID Sbjct: 3 DEKPKEGVKTENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTID 85 The following BLAST results are available for this feature:
BLAST of CX287343 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287343 ID=CX287343; Name=CX287343; organism=Citrus clementina; type=EST; length=410bpback to top |