CX287582

Overview
NameCX287582
Unique NameCX287582
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length281
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX287582 vs. ExPASy Swiss-Prot
Match: PP179_ARATH (Pentatricopeptide repeat-containing protein At2g32230, mitochondrial OS=Arabidopsis thaliana GN=At2g32230 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.312e-17
Identity = 39/57 (68.42%), Postives = 48/57 (84.21%), Query Frame = 2 
Query:    2 KHQIRLSVSR-DGLNLLMPPPYSIVIQESENGSWHVPVITGDDLEAPRQWLCATRAR 169
            KHQ+R+SV+R DGL L MPPPYSIVIQESE+G+WHVP+   DDL+  RQWLCA R++
Sbjct:  514 KHQVRISVTREDGLKLNMPPPYSIVIQESEDGTWHVPMSVEDDLQTSRQWLCAKRSK 570
The following BLAST results are available for this feature:
BLAST of CX287582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PP179_ARATH5.312e-1768.42Pentatricopeptide repeat-containing protein At2g32... [more]
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Properties
Property NameValue
Genbank descriptionC01011B05SK Veg1 Citrus clementina cDNA clone C01011B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287582 ID=CX287582; Name=CX287582; organism=Citrus clementina; type=EST; length=281bp
AAAACATCAAATTCGATTGTCAGTCTCAAGAGATGGACTTAACCTGCTCA
TGCCGCCTCCTTATTCAATTGTCATTCAGGAATCAGAAAATGGTAGTTGG
CACGTGCCAGTGATCACAGGTGATGATCTTGAGGCTCCAAGGCAGTGGTT
GTGTGCAACCAGAGCCAGGGTTAAATCATTGCATTCTTTGTTCTCAAATT
AATGTGCTAATTCTTAACCAAAAGTTGACGAGTTCTTAAATGAAAATCAA
TTTTGTATTCGTACAAAAAAAAAAAAAAAAA
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