CX287596

Overview
NameCX287596
Unique NameCX287596
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length641
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig396 contig Ccv1_Contig396:411..1051. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX287596 vs. ExPASy Swiss-Prot
Match: TAL_ACIC1 (Transaldolase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=tal PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 5.988e-42
Identity = 97/195 (49.74%), Postives = 128/195 (65.64%), Query Frame = 3
Query:   75 GQSPWYDNLCRP---VTDLLPLIASG-VRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETDGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLEAS--GLSDLSRVTSVASFFVSR 641
            G S W D++ R      +L  LI    V GVT+NP IF KAI  S  Y DQ R+L   G D+  A   L   D++ AC +   ++D TDG DG VS+EV PRLA DT+ T+  A+ L  +V+RPN++IKIPAT   +P+I + +++GISVNVTLIFS+ RYE+VIDA+ DG+E +     DLSR+ SVASFFVSR
Sbjct:   12 GVSIWIDDISRDRLQTGNLAALIRDRHVVGVTTNPTIFGKAIEGSARYQDQLRDLAVRGVDVNEALRALTAYDVRWACDVTRPVFDATDGVDGRVSIEVDPRLAHDTEATIAEARALWWLVDRPNLFIKIPATVEGLPAIAQCLAEGISVNVTLIFSVKRYEQVIDAFFDGVERAIEAGHDLSRLASVASFFVSR 206          
BLAST of CX287596 vs. ExPASy Swiss-Prot
Match: TAL1_STRAW (Transaldolase 1 OS=Streptomyces avermitilis GN=tal1 PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.742e-41
Identity = 103/197 (52.28%), Postives = 129/197 (65.48%), Query Frame = 3
Query:   72 EGQSPWYDNLCRP-VT--DLLPLIA-SGVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETDGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLE---ASGLSDLSRVTSVASFFVSR 641
            EG S W D+L R  +T  +L  LIA   V GVT+NP+IFQ AI S   Y +Q  +L   G  ++ A   +   D++ A  +   +YD T G DG VS+EV PRLA DT+ T+  AK L  +V+RPNV IKIPAT   +P+I EVI  GISVNVTLIFSL RY EV+DAYL GLE   A+G+ DL+ + SVASFFVSR
Sbjct:   17 EGVSIWLDDLSRKRITSGNLAELIAHKHVVGVTTNPSIFQAAIGSGEGYEEQLADLAVRGVTVDEAVRMMTTADVRAAADILRPVYDATGGRDGRVSIEVDPRLAHDTEATIAEAKQLAWLVDRPNVMIKIPATKAGLPAITEVIGLGISVNVTLIFSLERYREVMDAYLAGLERAQAAGI-DLAGIHSVASFFVSR 212          
BLAST of CX287596 vs. ExPASy Swiss-Prot
Match: TAL_FRAAA (Transaldolase OS=Frankia alni (strain ACN14a) GN=tal PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 2.972e-41
Identity = 94/195 (48.21%), Postives = 131/195 (67.18%), Query Frame = 3
Query:   75 GQSPWYDNLCRP---VTDLLPLIAS-GVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETDGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLEAS--GLSDLSRVTSVASFFVSR 641
            G + W D++ R      +L  L+A+  V GVTSNP IFQKAI+SS+ YN+Q R+L   G D+  A   +   D+++AC +   +YD + G DG VS+EV PRLA + + TV  A+ L  +V+RPN++IKIPAT   +P+I E ++QGISVNVTLIF L RY+ VIDA++ G+E +     D+S + SVASFFVSR
Sbjct:   12 GVAVWLDDISRDRLRTGNLADLVANRSVVGVTSNPTIFQKAIASSDLYNEQLRDLKVRGVDVGEAVRAITAADVREACDVLRGVYDASGGVDGRVSLEVDPRLAHEAERTVAEARALWWLVDRPNLFIKIPATQDGLPAITETLAQGISVNVTLIFGLDRYDAVIDAFMSGVEQAIEAGRDVSDLASVASFFVSR 206          
BLAST of CX287596 vs. ExPASy Swiss-Prot
Match: TAL_SACEN (Transaldolase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=tal PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 3.881e-41
Identity = 98/195 (50.26%), Postives = 132/195 (67.69%), Query Frame = 3
Query:   75 GQSPWYDNLCRPVTD---LLPLIAS-GVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETDGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLEASGLS--DLSRVTSVASFFVSR 641
            G S W D+L R   +   L  LI+   V GVTSNP IF KA+S++  Y++Q REL   G  ++ A  EL  +DI++A  +F +IY+   G DG VS+EV PRLA DT+ TV  A  L K V+RPN+ +KIPAT   +P+I  V+++G+SVNVTLIFS+ RY +V+DAYL GLE +  +  DL+R+ SVASFFVSR
Sbjct:   14 GVSIWLDDLSRKRINSGNLAELISDYAVVGVTSNPTIFAKALSNAADYDEQVRELAARGASVDDAVRELTTRDIREAADIFRNIYEA--GHDGRVSLEVDPRLAHDTERTVAEALDLWKAVDRPNLMVKIPATVEGLPAITRVLAEGVSVNVTLIFSVERYRDVMDAYLAGLEQAKANGHDLARIASVASFFVSR 206          
BLAST of CX287596 vs. ExPASy Swiss-Prot
Match: TAL_MYCTU (Transaldolase OS=Mycobacterium tuberculosis GN=tal PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 5.069e-41
Identity = 93/195 (47.69%), Postives = 131/195 (67.18%), Query Frame = 3
Query:   75 GQSPWYDNLCRPVT---DLLPLI-ASGVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETDGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLEASGLS--DLSRVTSVASFFVSR 641
            G S W D+L R      +L  LI    V GVT+NP+IFQKA+S  + Y+ Q  EL   G D++A    +   D++ AC +    ++++DG DG VS+EV PRLA +T+ T++ A  L K+V+RPN++IKIPAT   +P+I  V+++GISVNVTLIFS+ RY EV+DAYL G+E +  +   LS++ SVASFFVSR
Sbjct:   15 GVSVWLDDLSRDRLRSGNLQELIDTKSVVGVTTNPSIFQKALSEGHTYDAQIAELAARGADVDATIRTVTTDDVRSACDVLVPQWEDSDGVDGRVSIEVDPRLAHETEKTIQQAIELWKIVDRPNLFIKIPATKAGLPAISAVLAEGISVNVTLIFSVQRYREVMDAYLTGMEKARQAGHSLSKIHSVASFFVSR 209          
BLAST of CX287596 vs. ExPASy Swiss-Prot
Match: TAL_MYCTA (Transaldolase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=tal PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 5.069e-41
Identity = 93/195 (47.69%), Postives = 131/195 (67.18%), Query Frame = 3
Query:   75 GQSPWYDNLCRPVT---DLLPLI-ASGVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETDGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLEASGLS--DLSRVTSVASFFVSR 641
            G S W D+L R      +L  LI    V GVT+NP+IFQKA+S  + Y+ Q  EL   G D++A    +   D++ AC +    ++++DG DG VS+EV PRLA +T+ T++ A  L K+V+RPN++IKIPAT   +P+I  V+++GISVNVTLIFS+ RY EV+DAYL G+E +  +   LS++ SVASFFVSR
Sbjct:   15 GVSVWLDDLSRDRLRSGNLQELIDTKSVVGVTTNPSIFQKALSEGHTYDAQIAELAARGADVDATIRTVTTDDVRSACDVLVPQWEDSDGVDGRVSIEVDPRLAHETEKTIQQAIELWKIVDRPNLFIKIPATKAGLPAISAVLAEGISVNVTLIFSVQRYREVMDAYLTGMEKARQAGHSLSKIHSVASFFVSR 209          
BLAST of CX287596 vs. ExPASy Swiss-Prot
Match: TAL_MYCBT (Transaldolase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=tal PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 5.069e-41
Identity = 93/195 (47.69%), Postives = 131/195 (67.18%), Query Frame = 3
Query:   75 GQSPWYDNLCRPVT---DLLPLI-ASGVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETDGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLEASGLS--DLSRVTSVASFFVSR 641
            G S W D+L R      +L  LI    V GVT+NP+IFQKA+S  + Y+ Q  EL   G D++A    +   D++ AC +    ++++DG DG VS+EV PRLA +T+ T++ A  L K+V+RPN++IKIPAT   +P+I  V+++GISVNVTLIFS+ RY EV+DAYL G+E +  +   LS++ SVASFFVSR
Sbjct:   15 GVSVWLDDLSRDRLRSGNLQELIDTKSVVGVTTNPSIFQKALSEGHTYDAQIAELAARGADVDATIRTVTTDDVRSACDVLVPQWEDSDGVDGRVSIEVDPRLAHETEKTIQQAIELWKIVDRPNLFIKIPATKAGLPAISAVLAEGISVNVTLIFSVQRYREVMDAYLTGMEKARQAGHSLSKIHSVASFFVSR 209          
BLAST of CX287596 vs. ExPASy Swiss-Prot
Match: TAL_MYCBP (Transaldolase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=tal PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 5.069e-41
Identity = 93/195 (47.69%), Postives = 131/195 (67.18%), Query Frame = 3
Query:   75 GQSPWYDNLCRPVT---DLLPLI-ASGVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETDGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLEASGLS--DLSRVTSVASFFVSR 641
            G S W D+L R      +L  LI    V GVT+NP+IFQKA+S  + Y+ Q  EL   G D++A    +   D++ AC +    ++++DG DG VS+EV PRLA +T+ T++ A  L K+V+RPN++IKIPAT   +P+I  V+++GISVNVTLIFS+ RY EV+DAYL G+E +  +   LS++ SVASFFVSR
Sbjct:   15 GVSVWLDDLSRDRLRSGNLQELIDTKSVVGVTTNPSIFQKALSEGHTYDAQIAELAARGADVDATIRTVTTDDVRSACDVLVPQWEDSDGVDGRVSIEVDPRLAHETEKTIQQAIELWKIVDRPNLFIKIPATKAGLPAISAVLAEGISVNVTLIFSVQRYREVMDAYLTGMEKARQAGHSLSKIHSVASFFVSR 209          
BLAST of CX287596 vs. ExPASy Swiss-Prot
Match: TAL_MYCBO (Transaldolase OS=Mycobacterium bovis GN=tal PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 5.069e-41
Identity = 93/195 (47.69%), Postives = 131/195 (67.18%), Query Frame = 3
Query:   75 GQSPWYDNLCRPVT---DLLPLI-ASGVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETDGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLEASGLS--DLSRVTSVASFFVSR 641
            G S W D+L R      +L  LI    V GVT+NP+IFQKA+S  + Y+ Q  EL   G D++A    +   D++ AC +    ++++DG DG VS+EV PRLA +T+ T++ A  L K+V+RPN++IKIPAT   +P+I  V+++GISVNVTLIFS+ RY EV+DAYL G+E +  +   LS++ SVASFFVSR
Sbjct:   15 GVSVWLDDLSRDRLRSGNLQELIDTKSVVGVTTNPSIFQKALSEGHTYDAQIAELAARGADVDATIRTVTTDDVRSACDVLVPQWEDSDGVDGRVSIEVDPRLAHETEKTIQQAIELWKIVDRPNLFIKIPATKAGLPAISAVLAEGISVNVTLIFSVQRYREVMDAYLTGMEKARQAGHSLSKIHSVASFFVSR 209          
BLAST of CX287596 vs. ExPASy Swiss-Prot
Match: TAL2_STRCO (Transaldolase 2 OS=Streptomyces coelicolor GN=tal2 PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 5.069e-41
Identity = 101/197 (51.27%), Postives = 129/197 (65.48%), Query Frame = 3
Query:   72 EGQSPWYDNLCRP-VT--DLLPLI-ASGVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETDGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLEAS---GLSDLSRVTSVASFFVSR 641
            EG + W D+L R  +T  +L  LI    V GVT+NP+IFQKAIS  + Y+ Q  +L   G  +E A   +   D++DA  +   +YD T G DG VS+EV PRLA +T  TV  AK L  +V+RPN +IKIPAT   +P+I E I  GISVNVTLIFSL RY +V+DA+L GLE +   GL DLS++ SVASFFVSR
Sbjct:   11 EGVAIWLDDLSRKRITSGNLAELIDQQHVVGVTTNPSIFQKAISQGDGYDQQLADLAVRGVTVEEAIRMITTADVRDAADILRPVYDNTGGKDGRVSIEVDPRLAHNTHATVAEAKQLAWLVDRPNTFIKIPATEAGLPAIAETIGLGISVNVTLIFSLERYRKVMDAFLTGLEKAKERGL-DLSQIHSVASFFVSR 206          
The following BLAST results are available for this feature:
BLAST of CX287596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
TAL_ACIC15.988e-4249.74Transaldolase OS=Acidothermus cellulolyticus (stra... [more]
TAL1_STRAW1.742e-4152.28Transaldolase 1 OS=Streptomyces avermitilis GN=tal... [more]
TAL_FRAAA2.972e-4148.21Transaldolase OS=Frankia alni (strain ACN14a) GN=t... [more]
TAL_SACEN3.881e-4150.26Transaldolase OS=Saccharopolyspora erythraea (stra... [more]
TAL_MYCTU5.069e-4147.69Transaldolase OS=Mycobacterium tuberculosis GN=tal... [more]
TAL_MYCTA5.069e-4147.69Transaldolase OS=Mycobacterium tuberculosis (strai... [more]
TAL_MYCBT5.069e-4147.69Transaldolase OS=Mycobacterium bovis (strain BCG /... [more]
TAL_MYCBP5.069e-4147.69Transaldolase OS=Mycobacterium bovis (strain BCG /... [more]
TAL_MYCBO5.069e-4147.69Transaldolase OS=Mycobacterium bovis GN=tal PE=3 S... [more]
TAL2_STRCO5.069e-4151.27Transaldolase 2 OS=Streptomyces coelicolor GN=tal2... [more]

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Properties
Property NameValue
Genbank descriptionC01011C07SK Veg1 Citrus clementina cDNA clone C01011C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287596 ID=CX287596; Name=CX287596; organism=Citrus clementina; type=EST; length=641bp
CTCGTGCCGAATTCGGCACGAGGAATGGAAGTAGTGCAAAGAGGACAACT
CTTCATGATCTCTATGAGCAGGAAGGGCAGAGCCCTTGGTATGATAACCT
TTGCCGCCCCGTCACAGATTTGCTTCCGCTCATTGCAAGTGGTGTTAGAG
GTGTTACCAGCAACCCTGCGATTTTCCAGAAAGCAATATCTTCATCGAAT
GCTTACAATGATCAATTTAGGGAACTTGTACAATCTGGAAAAGATATTGA
AGCTGCATATTGGGAACTTGTGATTAAGGACATTCAAGATGCATGCAAAC
TTTTTGAGTCAATCTATGATGAAACCGATGGCGGTGATGGCTATGTTTCT
GTCGAAGTTTCTCCCAGACTCGCTGATGATACCCAAGGGACCGTGGAGGC
AGCAAAATGGCTTCACAAAGTGGTTAATCGCCCCAATGTATACATAAAGA
TACCTGCCACAGCTCCTTGCGTTCCTTCTATCAAGGAAGTTATTTCGCAG
GGCATTAGTGTCAATGTGACTCTCATATTCTCCCTGGCTAGATATGAAGA
AGTCATTGATGCTTACTTGGATGGCCTTGAGGCTTCTGGGCTGAGTGACC
TTTCCAGAGTTACAAGTGTTGCATCCTTTTTCGTTAGTCGA
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