CX287674
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287674 vs. ExPASy Swiss-Prot
Match: ERF3_YEAST (Eukaryotic peptide chain release factor GTP-binding subunit OS=Saccharomyces cerevisiae GN=SUP35 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.156e-21 Identity = 47/124 (37.90%), Postives = 75/124 (60.48%), Query Frame = 1 Query: 25 DILSGFVLSSVAKPVAAVTEFIAQLQILELLDNAIFTAGYKAVLHIHAVVEECEIVELLHQIDXXXXXXXXXXXXXXXNGAIVVCRIQVNNSICTEKFADFAQLGRFTLRTEGKTVAVGKVTEL 396 DI GFVL+S P+ +VT+F+AQ+ I+EL +I AG+ V+H+H +EE IV+LLH+++ G V+ ++ +C E + D+ QLGRFTLR +G T+A+GK+ ++ Sbjct: 562 DISPGFVLTSPKNPIKSVTKFVAQIAIVEL--KSIIAAGFSCVMHVHTAIEEVHIVKLLHKLEKGTNRKSKKPPAFAKKGMKVIAVLETEAPVCVETYQDYPQLGRFTLRDQGTTIAIGKIVKI 683
BLAST of CX287674 vs. ExPASy Swiss-Prot
Match: ERF3_DEBHA (Eukaryotic peptide chain release factor GTP-binding subunit OS=Debaryomyces hansenii GN=SUP35 PE=3 SV=4) HSP 1 Score: 100.908 bits (250), Expect = 5.156e-21 Identity = 46/124 (37.10%), Postives = 75/124 (60.48%), Query Frame = 1 Query: 25 DILSGFVLSSVAKPVAAVTEFIAQLQILELLDNAIFTAGYKAVLHIHAVVEECEIVELLHQIDXXXXXXXXXXXXXXXNGAIVVCRIQVNNSICTEKFADFAQLGRFTLRTEGKTVAVGKVTEL 396 D+ G+VL+S KP+ +T F AQ+ I+EL +I + G+ V+H+H +EE +EL H+++ G V+ ++ N S+C E +AD+ QLGRFTLR +G T+A+GK+T++ Sbjct: 579 DLAPGYVLTSPLKPIKTITRFEAQIAIVEL--KSILSNGFSCVMHLHTAIEEVTFIELKHKLEKGTNRKSKKPPAFAKKGMKVIAILETNESVCAETYADYPQLGRFTLRDQGTTIAIGKITKV 700
BLAST of CX287674 vs. ExPASy Swiss-Prot
Match: ERF3_KLULA (Eukaryotic peptide chain release factor GTP-binding subunit OS=Kluyveromyces lactis GN=SUP35 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 8.794e-21 Identity = 47/124 (37.90%), Postives = 74/124 (59.68%), Query Frame = 1 Query: 25 DILSGFVLSSVAKPVAAVTEFIAQLQILELLDNAIFTAGYKAVLHIHAVVEECEIVELLHQIDXXXXXXXXXXXXXXXNGAIVVCRIQVNNSICTEKFADFAQLGRFTLRTEGKTVAVGKVTEL 396 +I +GFVL+S PV VT F+AQ+ I+EL +I +AG+ V+HIH +EE + LLH+++ G ++ I+ N +C E + D+ QLGRFTLR +G T+A+GK+ ++ Sbjct: 576 EISAGFVLTSPKNPVKNVTRFVAQIAIVEL--KSIMSAGFSCVMHIHTAIEEVTVTRLLHKLEKGSNRKSKKPPAFAKKGMKIIAVIETNEPVCVETYDDYPQLGRFTLRDQGTTIAIGKIVKI 697
BLAST of CX287674 vs. ExPASy Swiss-Prot
Match: ERF3_SCHPO (Eukaryotic peptide chain release factor GTP-binding subunit OS=Schizosaccharomyces pombe GN=sup35 PE=1 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 1.500e-20 Identity = 51/124 (41.13%), Postives = 72/124 (58.06%), Query Frame = 1 Query: 25 DILSGFVLSSVAKPVAAVTEFIAQLQILELLDNAIFTAGYKAVLHIHAVVEECEIVELLHQIDXXXXXXXXXXXXXXXNGAIVVCRIQVNNSICTEKFADFAQLGRFTLRTEGKTVAVGKVTEL 396 D+ +G+VL+S PV A T FIAQ+ ILEL +I T GY V+HIH VEE +LLH++D G ++ ++ +C E+F D+ +GRFTLR +G TVAVGKV ++ Sbjct: 540 DVQTGYVLTSTKNPVHATTRFIAQIAILEL--PSILTTGYSCVMHIHTAVEEVSFAKLLHKLDKTNRKSKKPPMFAT-KGMKIIAELETQTPVCMERFEDYQYMGRFTLRDQGTTVAVGKVVKI 660
BLAST of CX287674 vs. ExPASy Swiss-Prot
Match: ERF3_ZYGRO (Eukaryotic peptide chain release factor GTP-binding subunit OS=Zygosaccharomyces rouxii GN=SUP35 PE=3 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 4.364e-20 Identity = 45/124 (36.29%), Postives = 73/124 (58.87%), Query Frame = 1 Query: 25 DILSGFVLSSVAKPVAAVTEFIAQLQILELLDNAIFTAGYKAVLHIHAVVEECEIVELLHQIDXXXXXXXXXXXXXXXNGAIVVCRIQVNNSICTEKFADFAQLGRFTLRTEGKTVAVGKVTEL 396 DI GFVL+S PV VT F+AQ+ I+EL +I ++G+ V+H+H +EE I +LLH+++ G ++ ++ +C E + D+ QLGRFTLR +G T+A+GK+ ++ Sbjct: 539 DIAPGFVLTSPKNPVKNVTRFVAQVAIVEL--KSILSSGFSCVMHVHTAIEEVRITKLLHKLERGTNRKSKKPPAFAKKGMKIIAVLETERPVCVETYQDYPQLGRFTLRDQGTTIAIGKIVKI 660
BLAST of CX287674 vs. ExPASy Swiss-Prot
Match: ERF3_PICPI (Eukaryotic peptide chain release factor GTP-binding subunit OS=Pichia pinus GN=SUP2 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.364e-20 Identity = 46/124 (37.10%), Postives = 72/124 (58.06%), Query Frame = 1 Query: 25 DILSGFVLSSVAKPVAAVTEFIAQLQILELLDNAIFTAGYKAVLHIHAVVEECEIVELLHQIDXXXXXXXXXXXXXXXNGAIVVCRIQVNNSICTEKFADFAQLGRFTLRTEGKTVAVGKVTEL 396 D+ +G+VLSS+ PV VT F AQ+ I+EL +I + G+ V+H+H +EE +LLH + G ++ ++ +C E + D+ QLGRFTLR +G+T+A+GKVT+L Sbjct: 619 DLSAGYVLSSINHPVKTVTRFEAQIAIVEL--KSILSTGFSCVMHVHTAIEEVTFTQLLHNLQKGTNRRSKKAPAFAKQGMKIIAVLETTEPVCIESYDDYPQLGRFTLRDQGQTIAIGKVTKL 740
BLAST of CX287674 vs. ExPASy Swiss-Prot
Match: ERF3_CANMA (Eukaryotic peptide chain release factor GTP-binding subunit OS=Candida maltosa GN=SUP35 PE=3 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 5.700e-20 Identity = 46/124 (37.10%), Postives = 75/124 (60.48%), Query Frame = 1 Query: 25 DILSGFVLSSVAKPVAAVTEFIAQLQILELLDNAIFTAGYKAVLHIHAVVEECEIVELLHQIDXXXXXXXXXXXXXXXNGAIVVCRIQVNNSICTEKFADFAQLGRFTLRTEGKTVAVGKVTEL 396 D+ G+VL+S PV VT+F AQ+ I+EL +I + G+ V+H+H +EE + VEL H+++ G ++ ++V+ +C E + D+ QLGRFTLR +G T+A+GK+T+L Sbjct: 590 DLQPGYVLTSPKNPVKTVTKFEAQIAIVEL--KSILSNGFSCVMHLHTAIEEVKFVELKHKLEKGTNRKSKKPPAFAKKGMKIIAILEVSEPVCAETYKDYPQLGRFTLRDQGTTIAIGKITKL 711
BLAST of CX287674 vs. ExPASy Swiss-Prot
Match: ERF3_CANAL (Eukaryotic peptide chain release factor GTP-binding subunit OS=Candida albicans GN=SUP35 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.658e-19 Identity = 45/124 (36.29%), Postives = 73/124 (58.87%), Query Frame = 1 Query: 25 DILSGFVLSSVAKPVAAVTEFIAQLQILELLDNAIFTAGYKAVLHIHAVVEECEIVELLHQIDXXXXXXXXXXXXXXXNGAIVVCRIQVNNSICTEKFADFAQLGRFTLRTEGKTVAVGKVTEL 396 D+ G+VL+S PV VT F AQ+ I+EL +I + G+ V+H+H +EE + +EL H+++ G ++ ++V +C E + D+ QLGRFTLR +G T+A+GK+T+L Sbjct: 593 DLQPGYVLTSPKNPVKTVTRFEAQIAIVEL--KSILSNGFSCVMHLHTAIEEVKFIELKHKLEKGTNRKSKKPPAFAKKGMKIIAILEVGELVCAETYKDYPQLGRFTLRDQGTTIAIGKITKL 714
BLAST of CX287674 vs. ExPASy Swiss-Prot
Match: ERF3A_MOUSE (Eukaryotic peptide chain release factor GTP-binding subunit ERF3A OS=Mus musculus GN=Gspt1 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.516e-17 Identity = 48/124 (38.71%), Postives = 67/124 (54.03%), Query Frame = 1 Query: 25 DILSGFVLSSVAKPVAAVTEFIAQLQILELLDNAIFTAGYKAVLHIHAVVEECEIVELLHQIDXXXXXXXXXXXXXXXNGAIVVCRIQVNNSICTEKFADFAQLGRFTLRTEGKTVAVGKVTEL 396 +IL GF+L + + F AQ+ I+E +I GY AVLHIH +EE EI L+ +D + + R++ +IC E F DF Q+GRFTLR EGKT+A+GKV +L Sbjct: 373 EILPGFILCDLNNLCHSGRTFDAQIVIIE--HKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKL 494
BLAST of CX287674 vs. ExPASy Swiss-Prot
Match: ERF3B_PONAB (Eukaryotic peptide chain release factor GTP-binding subunit ERF3B OS=Pongo abelii GN=GSPT2 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 7.704e-17 Identity = 47/124 (37.90%), Postives = 66/124 (53.23%), Query Frame = 1 Query: 25 DILSGFVLSSVAKPVAAVTEFIAQLQILELLDNAIFTAGYKAVLHIHAVVEECEIVELLHQIDXXXXXXXXXXXXXXXNGAIVVCRIQVNNSICTEKFADFAQLGRFTLRTEGKTVAVGKVTEL 396 +IL GF+L + + F Q+ I+E +I GY AVLHIH +EE EI L+ +D + + R++ +IC E F DF Q+GRFTLR EGKT+A+GKV +L Sbjct: 502 EILPGFILCDPSNLCHSGRTFDVQIVIIE--HKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKL 623 The following BLAST results are available for this feature:
BLAST of CX287674 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287674 ID=CX287674; Name=CX287674; organism=Citrus clementina; type=EST; length=602bpback to top |