CX287678
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287678 vs. ExPASy Swiss-Prot
Match: DR102_ARATH (DNA-damage-repair/toleration protein DRT102 OS=Arabidopsis thaliana GN=DRT102 PE=2 SV=2) HSP 1 Score: 229.95 bits (585), Expect = 7.441e-60 Identity = 117/187 (62.57%), Postives = 140/187 (74.87%), Query Frame = 2 Query: 59 ADAAAPHPLKIIAGADSFGAELKDALVSHLRSLNIDVEDLGTSDYYSIGAEVGRRVSSSDSSETTTRGLVACGTGVGVAIFANKNPGVFATTCLTPADALNTRSINNCNVLAVSGMSTSKESAVEILDTWLKTPFKAPCPASGLKPWDEKLSCFFDKSMTEMPLIGKNDKLDS-----DSSGSTCSI 604 A +A PLKII GAD FGA LKDA+V+HLRSL IDVED G S YYS G+EVGRRVS+S SSE RGLV CGTGVGVA+FANK PGV+A TCL+ DA+N RSI+NCNVLA SG+ TS E+A+EI D W+KTPFK+PCPASG +PW +S F D S++EM IGK+ DS D + ++C I Sbjct: 4 AVSAVDQPLKIITGADDFGASLKDAMVTHLRSLGIDVEDTGVSSYYSAGSEVGRRVSASSSSEV--RGLVCCGTGVGVAMFANKFPGVYAATCLSVEDAVNARSISNCNVLAFSGIKTSPETALEIFDAWIKTPFKSPCPASGSEPWSSVISSFLDNSLSEMSQIGKSTAGDSTTKKIDETTASCVI 188
BLAST of CX287678 vs. ExPASy Swiss-Prot
Match: RPIB_ECOLI (Ribose-5-phosphate isomerase B OS=Escherichia coli (strain K12) GN=rpiB PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.520e-12 Identity = 46/132 (34.85%), Postives = 65/132 (49.24%), Query Frame = 2 Query: 86 KIIAGADSFGAELKDALVSHLRSLNIDVEDLGT-----SDYYSIGAEVGRRVSSSDSSETTTRGLVACGTGVGVAIFANKNPGVFATTCLTPADALNTRSINNCNVLAVSGMSTSKESAVEILDTWLKTPFK 466 KI G D G LK +V+HL ++V D GT +DY ++V V+ + G++ CGTGVG++I ANK G+ A C P A +R N+ NVLA E A I+D WL ++ Sbjct: 3 KIAFGCDHVGFILKHEIVAHLVERGVEVIDKGTWSSERTDYPHYASQVALAVAGGE----VDGGILICGTGVGISIAANKFAGIRAVVCSEPYSAQLSRQHNDTNVLAFGSRVVGLELAKMIVDAWLGAQYE 130
BLAST of CX287678 vs. ExPASy Swiss-Prot
Match: LACB_STRMU (Galactose-6-phosphate isomerase subunit lacB OS=Streptococcus mutans GN=lacB PE=3 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 4.891e-11 Identity = 41/129 (31.78%), Postives = 64/129 (49.61%), Query Frame = 2 Query: 83 LKIIAGADSFGAELKDALVSHLRSLNIDVEDLGTSDYYSIGAEV-GRRVSSSDSSETTTRGLVACGTGVGVAIFANKNPGVFATTCLTPADALNTRSINNCNVLAVSGMSTSKESAVEILDTWLKTPFK 466 +KI G D ++K L HL+ +V D+GT D+ + G++V + SS G+ CGTGVG++ ANK PGV AL ++ N NV++ G K +I+D ++K +K Sbjct: 1 MKIAIGCDHIVTDVKMELSKHLKEEGYEVLDVGTYDFTRTHYPIFGKKVGEAVSSGEADLGVCMCGTGVGISNAANKVPGVRTALVRDMTSALYSKEELNANVVSFGGAIIGKLLLFDIVDAFIKAQYK 129 The following BLAST results are available for this feature:
BLAST of CX287678 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX287678 ID=CX287678; Name=CX287678; organism=Citrus clementina; type=EST; length=604bpback to top |