CX287686

Overview
NameCX287686
Unique NameCX287686
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length563
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14052 contig Ccv1_Contig14052:636..1198. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX287686 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 343.969 bits (881), Expect = 3.038e-94
Identity = 169/187 (90.37%), Postives = 174/187 (93.05%), Query Frame = 3
Query:    3 GAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQP 563
            GAQPGPVLSW QRVKIAVGAA+GLEYLHEKA+PHIIHRDIKSSNVL+F+DDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDH LPRGQQSLVTWATPKLSEDKV+QCVDARLGGDYPP           LCVQYEADFRPNMSIVVKALQP
Sbjct:  165 GAQPGPVLSWYQRVKIAVGAARGLEYLHEKANPHIIHRDIKSSNVLLFEDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHRLPRGQQSLVTWATPKLSEDKVKQCVDARLGGDYPPKAVAKLAAVAALCVQYEADFRPNMSIVVKALQP 351          
BLAST of CX287686 vs. ExPASy Swiss-Prot
Match: PTI1_SOLLC (Pto-interacting protein 1 OS=Solanum lycopersicum GN=PTI1 PE=1 SV=2)

HSP 1 Score: 338.576 bits (867), Expect = 1.276e-92
Identity = 166/187 (88.77%), Postives = 172/187 (91.98%), Query Frame = 3
Query:    3 GAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQP 563
            GAQPGPVLSW QRVKIAVGAAKGLEYLHEKA PHIIHRDIKSSN+L+FDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL++KSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATP+LSEDKV+QCVDARL  DYPP           LCVQYEADFRPNMSIVVKALQP
Sbjct:  160 GAQPGPVLSWAQRVKIAVGAAKGLEYLHEKAQPHIIHRDIKSSNILLFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPRLSEDKVKQCVDARLNTDYPPKAIAKMAAVAALCVQYEADFRPNMSIVVKALQP 346          
BLAST of CX287686 vs. ExPASy Swiss-Prot
Match: Y2197_ARATH (Probable protein kinase At2g41970 OS=Arabidopsis thaliana GN=At2g41970 PE=2 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 3.852e-81
Identity = 142/187 (75.94%), Postives = 162/187 (86.63%), Query Frame = 3
Query:    3 GAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQP 563
            GA+PGPVL+W QRVKIA GAAKGLE+LHEK  P I+HRD++SSNVL+FDD VAK+ADF+L+N + D AARLHSTRVLGTFGYHAPEYAMTGQ+  KSDVYSFGVVLLELLTGRKPVDHT+P+GQQSLVTWATP+LSEDKV+QC+D +L  D+PP           LCVQYEADFRPNM+IVVKALQP
Sbjct:  166 GAEPGPVLNWNQRVKIAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFVAKMADFNLTNASSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCIDPKLNNDFPPKAVAKLAAVAALCVQYEADFRPNMTIVVKALQP 352          
BLAST of CX287686 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 7.101e-43
Identity = 90/179 (50.28%), Postives = 118/179 (65.92%), Query Frame = 3
Query:   24 LSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSE-DKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKAL 557
            L W  R+KIA GAAKGLE+LH+KA+P +I+RD KSSN+L+ +    K++DF L+   P       STRV+GT+GY APEYAMTGQL  KSDVYSFGVV LEL+TGRK +D  +P G+Q+LV WA P  ++  K  +  D RL G +P            +C+Q +A  RP ++ VV AL
Sbjct:  182 LDWNMRMKIAAGAAKGLEFLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSEMPHGEQNLVAWARPLFNDRRKFIKLADPRLKGRFPTRALYQALAVASMCIQEQAATRPLIADVVTAL 360          
BLAST of CX287686 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 6.646e-41
Identity = 88/179 (49.16%), Postives = 115/179 (64.25%), Query Frame = 3
Query:   24 LSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDK-VRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKAL 557
            L W  R+KIA GAA+GLEYLH++  P +I+RD+K SN+L+ +D   K++DF L+   P       STRV+GT+GY AP+YAMTGQL  KSD+YSFGVVLLEL+TGRK +D+T  R  Q+LV WA P   + +   + VD  L G YP            +CVQ +   RP +S VV AL
Sbjct:  199 LDWNTRMKIAAGAARGLEYLHDRMTPPVIYRDLKCSNILLGEDYQPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDNTKTRKDQNLVGWARPLFKDRRNFPKMVDPLLQGQYPVRGLYQALAISAMCVQEQPTMRPVVSDVVLAL 377          
BLAST of CX287686 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 3.299e-40
Identity = 86/179 (48.04%), Postives = 120/179 (67.04%), Query Frame = 3
Query:   24 LSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSE-DKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKAL 557
            L+W  RVK+A+G AK LEYLHE   P I+HR+ KS+N+L+ ++    ++D  L+   P+   ++ ST+V+G+FGY APE+A++G    KSDVY+FGVV+LELLTGRKP+D +  R +QSLV WATP+L + D + + VD  L G YP            LC+Q E +FRP MS VV+ L
Sbjct:  492 LTWNARVKVALGTAKALEYLHEVCLPSIVHRNFKSANILLDEELNPHLSDSGLAALTPNTERQV-STQVVGSFGYSAPEFALSGIYTVKSDVYTFGVVMLELLTGRKPLDSSRTRAEQSLVRWATPQLHDIDALSKMVDPSLNGMYPAKSLSRFADIIALCIQPEPEFRPPMSEVVQQL 669          
BLAST of CX287686 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 4.308e-40
Identity = 92/180 (51.11%), Postives = 114/180 (63.33%), Query Frame = 3
Query:   24 LSWQQRVKIAVGAAKGLEYLHEKADP-HIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKL-SEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKAL 557
            LSW  R+K+A+ AAKGL +LH  +DP  +I+RDIK+SN+L+  D  AK++DF L+   P       STRV+GTFGY APEY  TG LNA+SDVYSFGVVLLELL GR+ +DH  P  +Q+LV WA P L S  KV   VD RL   Y P            C+ +E   RP M  VV+AL
Sbjct:  167 LSWILRIKVALDAAKGLAFLH--SDPVKVIYRDIKASNILLDSDFNAKLSDFGLARDGPMGEQSYVSTRVMGTFGYAAPEYVSTGHLNARSDVYSFGVVLLELLCGRQALDHNRPAKEQNLVDWARPYLTSRRKVLLIVDTRLNSQYKPEGAVRLASIAVQCLSFEPKSRPTMDQVVRAL 344          
BLAST of CX287686 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 4.032e-38
Identity = 88/187 (47.06%), Postives = 120/187 (64.17%), Query Frame = 3
Query:    3 GAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSED-KVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 560
            GAQP   L+W  R+K+AVGAAKGL +LHE A   +I+RD K++N+L+  D  AK++DF L+   P       ST+V+GT GY APEY  TG+L AKSDVYSFGVVLLEL++GR+ +D++    + SLV WATP L +  K+ + +D +LGG YP             C+  +A  RP MS V+  L+
Sbjct:  185 GAQP---LTWAIRMKVAVGAAKGLTFLHE-AKSQVIYRDFKAANILLDADFNAKLSDFGLAKAGPTGDNTHVSTKVIGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELISGRRAMDNSNGGNEYSLVDWATPYLGDKRKLFRIMDTKLGGQYPQKGAFTAANLALQCLNPDAKLRPKMSEVLVTLE 367          
BLAST of CX287686 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 8.983e-38
Identity = 88/186 (47.31%), Postives = 119/186 (63.98%), Query Frame = 3
Query:    3 GAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSED-KVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKAL 557
            GAQP   L+W  R+K+A+GAAKGL +LH+ A   +I+RD K++N+L+  +  +K++DF L+   P       ST+V+GT GY APEY  TG+L AKSDVYSFGVVLLELL+GR+ VD +    +QSLV WATP L +  K+ + +D RLGG YP             C+  +A  RP MS V+  L
Sbjct:  182 GAQP---LTWAIRMKVAIGAAKGLTFLHD-AKSQVIYRDFKAANILLDAEFNSKLSDFGLAKAGPTGDKTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKSKVGMEQSLVDWATPYLGDKRKLFRIMDTRLGGQYPQKGAYTAASLALQCLNPDAKLRPKMSEVLAKL 363          
BLAST of CX287686 vs. ExPASy Swiss-Prot
Match: SRF7_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana GN=SRF7 PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 7.605e-37
Identity = 87/179 (48.60%), Postives = 112/179 (62.57%), Query Frame = 3
Query:   24 LSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSE-DKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKAL 557
            L W  RVKIA+G A+ LEYLHE   P I+H++IKS+N+L+  +    ++D  L++  P     L+        GY APE +M+GQ + KSDVYSFGVV+LELLTGRKP D T  R +QSLV WATP+L + D + + VD  L G YP            LCVQ E +FRP MS VV+AL
Sbjct:  516 LIWNPRVKIALGTARALEYLHEVCSPSIVHKNIKSANILLDSELNPHLSDSGLASFLPTANELLNQNDE----GYSAPETSMSGQYSLKSDVYSFGVVMLELLTGRKPFDSTRSRSEQSLVRWATPQLHDIDALGKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQAL 690          
The following BLAST results are available for this feature:
BLAST of CX287686 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 399
Match NameE-valueIdentityDescription
Y2706_ARATH3.038e-9490.37Probable receptor-like protein kinase At2g47060 OS... [more]
PTI1_SOLLC1.276e-9288.77Pto-interacting protein 1 OS=Solanum lycopersicum ... [more]
Y2197_ARATH3.852e-8175.94Probable protein kinase At2g41970 OS=Arabidopsis t... [more]
PBS1_ARATH7.101e-4350.28Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
RLCK7_ARATH6.646e-4149.16Probable serine/threonine-protein kinase RLCKVII O... [more]
SRF8_ARATH3.299e-4048.04Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
Y3545_ARATH4.308e-4051.11Probable receptor-like protein kinase At3g55450 OS... [more]
APK2A_ARATH4.032e-3847.06Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
APK2B_ARATH8.983e-3847.31Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
SRF7_ARATH7.605e-3748.60Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionC01012C06SK Veg1 Citrus clementina cDNA clone C01012C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287686 ID=CX287686; Name=CX287686; organism=Citrus clementina; type=EST; length=563bp
AAGGAGCTCAGCCTGGTCCTGTTTTGTCATGGCAACAGCGAGTGAAAATT
GCTGTAGGGGCTGCGAAAGGGCTTGAATACTTGCATGAGAAGGCAGATCC
TCATATTATCCATCGCGATATTAAGTCCAGCAATGTACTAATTTTTGATG
ATGATGTAGCAAAGATTGCCGACTTTGATTTATCTAATCAAGCTCCTGAT
ATGGCAGCTCGCCTTCATTCTACTCGTGTTCTTGGAACTTTTGGTTATCA
TGCTCCTGAGTATGCAATGACTGGACAGTTGAATGCAAAGAGTGATGTAT
ACAGCTTTGGTGTTGTTCTGCTTGAGCTTCTGACAGGTCGAAAACCTGTC
GATCATACACTACCACGTGGACAGCAGAGTCTAGTGACATGGGCCACACC
GAAACTTAGTGAAGATAAGGTTAGGCAATGCGTTGATGCAAGACTAGGAG
GAGATTATCCTCCCAAGGCAGTTGCAAAGATGGCTGCAGTTGCTGCTCTG
TGTGTTCAGTATGAAGCTGATTTCCGTCCAAATATGAGCATTGTTGTCAA
AGCCCTCCAGCCC
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