CX287693
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287693 vs. ExPASy Swiss-Prot
Match: RC22_ARATH (UPF0057 membrane protein At2g24040 OS=Arabidopsis thaliana GN=At2g24040 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 4.742e-21 Identity = 42/52 (80.77%), Postives = 48/52 (92.31%), Query Frame = 3 Query: 96 GVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIVFVDRDEYFDEYRRPLY 251 GVCL+HGCCTVEF ICL+LT LGY+PGIIYA+YAI F+ RDEYFDEYRRP+Y Sbjct: 21 GVCLRHGCCTVEFFICLILTCLGYLPGIIYAIYAICFLHRDEYFDEYRRPIY 72
BLAST of CX287693 vs. ExPASy Swiss-Prot
Match: RC24_ARATH (UPF0057 membrane protein At4g30660 OS=Arabidopsis thaliana GN=At4g30660 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 6.847e-20 Identity = 41/53 (77.36%), Postives = 47/53 (88.68%), Query Frame = 3 Query: 96 GVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIVFVDRDEYFDEYRRPLYA 254 GVC + GCCTVEF ICL+LTILGYVPGIIYA+Y IVF R+EYFDEYRRP+Y+ Sbjct: 21 GVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIVFQHREEYFDEYRRPIYS 73
BLAST of CX287693 vs. ExPASy Swiss-Prot
Match: OSR8_ORYSJ (Hydrophobic protein OSR8 OS=Oryza sativa subsp. japonica GN=OSR8 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.614e-14 Identity = 33/47 (70.21%), Postives = 40/47 (85.11%), Query Frame = 3 Query: 96 GVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIVFVDRDEYFDEY 236 GV L+ GCC++EFCICLLLTILGYVPGIIYA+Y +V +D D+Y EY Sbjct: 22 GVFLRFGCCSMEFCICLLLTILGYVPGIIYAVYVLVALDSDQYQREY 68
BLAST of CX287693 vs. ExPASy Swiss-Prot
Match: RC23_ARATH (UPF0057 membrane protein At4g30650 OS=Arabidopsis thaliana GN=At4g30650 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.332e-14 Identity = 33/41 (80.49%), Postives = 37/41 (90.24%), Query Frame = 3 Query: 96 GVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIVFVDRD 218 GVCLK GCCTVEF ICL+LTILGY+PGIIYALY IVF +R+ Sbjct: 21 GVCLKRGCCTVEFLICLVLTILGYIPGIIYALYVIVFQNRE 61 The following BLAST results are available for this feature:
BLAST of CX287693 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX287693 ID=CX287693; Name=CX287693; organism=Citrus clementina; type=EST; length=406bpback to top |