CX287735

Overview
NameCX287735
Unique NameCX287735
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length421
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig73 contig Ccv1_Contig73:1..421. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX287735 vs. ExPASy Swiss-Prot
Match: TYPX_TRYBB (Tryparedoxin OS=Trypanosoma brucei brucei PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.546e-11
Identity = 31/73 (42.47%), Postives = 46/73 (63.01%), Query Frame = 1 
Query:  199 GVEFLLSRQGKVPLSSCGGKTICLFFSANWCRPCKTFTPQLVQLYDTLRTRGTELEVIFISFDHDENGFEEHF 417
            G   LLS+ G+V L S  GKT+ L+FSA+WC PC+ FTP L + Y+         EV+ IS+D +E+ F +++
Sbjct:   10 GATNLLSKSGEVSLGSLVGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHV-AKNFEVVLISWDENESDFHDYY 81
The following BLAST results are available for this feature:
BLAST of CX287735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TYPX_TRYBB2.546e-1142.47Tryparedoxin OS=Trypanosoma brucei brucei PE=1 SV=... [more]
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Properties
Property NameValue
Genbank descriptionC01012G08SK Veg1 Citrus clementina cDNA clone C01012G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287735 ID=CX287735; Name=CX287735; organism=Citrus clementina; type=EST; length=421bp
GCTCTGTTTTTACAACTTTGTCCCTCAATCCTCTCATCTCGTCTCCCTCT
TTCACCGGAATATTCTCGAGCAGAGCTACGAGATTATTAAAAGAAGCAGA
GTGGATACCAGCTTCAGCTTGTTGTTCTAATGGCAAGAGACAACGATCAA
TCCAAATTTATTGACAGCAGCGACTTTCTGACAGTCTTAGCATCTGAAGG
TGTAGAGTTCCTTCTTTCTCGTCAAGGAAAGGTACCCTTGTCATCATGTG
GTGGCAAGACAATTTGCCTCTTCTTCTCTGCTAACTGGTGCAGACCATGT
AAAACTTTTACTCCACAATTGGTGCAACTTTATGACACGCTAAGAACCAG
AGGTACAGAGCTGGAAGTTATCTTCATTTCCTTTGACCATGATGAGAATG
GATTCGAGGAGCACTTCAAGT
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