CX287745
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287745 vs. ExPASy Swiss-Prot
Match: C3H48_ARATH (Zinc finger CCCH domain-containing protein 48 OS=Arabidopsis thaliana GN=ZFWD1 PE=2 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 7.723e-59 Identity = 97/132 (73.48%), Postives = 114/132 (86.36%), Query Frame = 2 Query: 32 LCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLGGEVGCMISEGPWIFIGVTNFVKAWNTQTNTDLSLSGPVGQVYAMAVGNDLLFA 427 LC+ WV GNC YG+KC++LH W+ GD F LLTQL+GHQKVV+GI LPSGSDKLY+ SKDETVR+WDCASGQC GV+NLGGEVGC+ISEGPW+ +G+ N VKAWN Q N DLSL+GPVGQVY++ VG DLLFA Sbjct: 107 LCKFWVDGNCPYGDKCRYLHCWSKGDSFSLLTQLDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGVLNLGGEVGCIISEGPWLLVGMPNLVKAWNIQNNADLSLNGPVGQVYSLVVGTDLLFA 238
BLAST of CX287745 vs. ExPASy Swiss-Prot
Match: C3H63_ARATH (Zinc finger CCCH domain-containing protein 63 OS=Arabidopsis thaliana GN=ZFWD2 PE=2 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 9.441e-57 Identity = 92/132 (69.70%), Postives = 113/132 (85.61%), Query Frame = 2 Query: 32 LCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLGGEVGCMISEGPWIFIGVTNFVKAWNTQTNTDLSLSGPVGQVYAMAVGNDLLFA 427 +C WV GNC YG+KC++LH W+ G+ F LLTQL+GH+K+VSGI LPSGSDKLY+GSKDET+RVWDCASGQC GV+ LGGE+GC++SEGPW+ +G+ N VKAWN +TN D SLSGPVGQVY++ VG DLLFA Sbjct: 114 VCNFWVDGNCTYGDKCRYLHCWSKGESFALLTQLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCTGVLKLGGEIGCVLSEGPWLLVGMPNLVKAWNIETNADQSLSGPVGQVYSLVVGTDLLFA 245
BLAST of CX287745 vs. ExPASy Swiss-Prot
Match: C3H17_ORYSJ (Zinc finger CCCH domain-containing protein 17 OS=Oryza sativa subsp. japonica GN=Os02g0677700 PE=2 SV=2) HSP 1 Score: 200.29 bits (508), Expect = 2.660e-51 Identity = 87/139 (62.59%), Postives = 115/139 (82.73%), Query Frame = 2 Query: 14 RHEA-DILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLGGEVGCMISEGPWIFIGVTNFVKAWNTQTNTDLSLSGPVGQVYAMAVGNDLLFA 427 RH+ D CR ++ G+C YGEKC++ HS+++ D +LT L+GH+KVV+GI LP+GSDKLYSGSKD TVR+WDC +GQCAGVIN+G E+GCMISEGPW+F+G+ + VK WN QT +++L+GP GQVYA+AVGN+LLFA Sbjct: 106 RHKVPDRPCRYFLAGDCSYGEKCRYPHSYSMSDSITMLTPLQGHEKVVTGIALPAGSDKLYSGSKDGTVRMWDCQTGQCAGVINMGREIGCMISEGPWLFVGIPDAVKVWNMQTQAEMNLTGPTGQVYALAVGNELLFA 244
BLAST of CX287745 vs. ExPASy Swiss-Prot
Match: C3H59_ARATH (Zinc finger CCCH domain-containing protein 59 OS=Arabidopsis thaliana GN=ZFWD3 PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 1.159e-38 Identity = 71/132 (53.79%), Postives = 90/132 (68.18%), Query Frame = 2 Query: 32 LCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLGGEVGCMISEGPWIFIGVTNFVKAWNTQTNTDLSLSGPVGQVYAMAVGNDLLFA 427 +C W GNC GEKC+FLHSW+ G ++ LEGH+ + GI LP GSDKL+S S D T+ +WDC SGQC INL E G +ISEGPW+F+G+ N VKA+N Q + D+ L G VGQV+AM N +LFA Sbjct: 150 VCNFWKDGNCKKGEKCQFLHSWSCFPGLAMVAALEGHKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNSGQCVRSINLQAEAGSLISEGPWVFLGLPNAVKAFNVQNSKDVHLEGVVGQVHAMTAANGMLFA 281
BLAST of CX287745 vs. ExPASy Swiss-Prot
Match: C3H62_ARATH (Zinc finger CCCH domain-containing protein 62 OS=Arabidopsis thaliana GN=ZFWD4 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 1.514e-38 Identity = 73/134 (54.48%), Postives = 93/134 (69.40%), Query Frame = 2 Query: 32 LCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLGGEVGCMISEGPWIFIGVTNFVKAWNTQTNTDLSL--SGPVGQVYAMAVGNDLLFA 427 +C+ W G C GE+C+FLHSW+ G ++ LEGH K + GI LP GSDKL+S S D T+RVWDC SGQC INL E G +ISEGPW+F+G+ N +KA+N QT+ DL L +G VGQV AM + N +LFA Sbjct: 94 VCKYWKDGKCKRGEQCQFLHSWSCFPGLAMVASLEGHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQCVHSINLDAEAGSLISEGPWVFLGLPNAIKAFNVQTSQDLHLQAAGVVGQVNAMTIANGMLFA 227 The following BLAST results are available for this feature:
BLAST of CX287745 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX287745 ID=CX287745; Name=CX287745; organism=Citrus clementina; type=EST; length=429bpback to top |