CX287748
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287748 vs. ExPASy Swiss-Prot
Match: CH10C_ARATH (20 kDa chaperonin, chloroplastic OS=Arabidopsis thaliana GN=CPN21 PE=1 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 1.688e-31 Identity = 66/83 (79.52%), Postives = 74/83 (89.16%), Query Frame = -3 Query: 151 VAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 399 VAEAEE TAGGLLLTE +KEKPSIGTVIAVGPG LDEEG PL ++ G+TV+YSKYAGNDFKG DG+NYIALRAS+VMA+LS Sbjct: 171 VAEAEEKTAGGLLLTETTKEKPSIGTVIAVGPGSLDEEGKITPLPVSTGSTVLYSKYAGNDFKGKDGSNYIALRASDVMAILS 253
BLAST of CX287748 vs. ExPASy Swiss-Prot
Match: CH10C_SPIOL (20 kDa chaperonin, chloroplastic OS=Spinacia oleracea GN=CPN21 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 1.024e-28 Identity = 60/83 (72.29%), Postives = 69/83 (83.13%), Query Frame = -3 Query: 151 VAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 399 VAE E T+GGLLL E+SKEKPS GTV+A GPG LDEEGNR PL + GNTV+YSKYAGNDFKG DG++Y+ LR S+VMAVLS Sbjct: 173 VAEVENKTSGGLLLAESSKEKPSFGTVVATGPGVLDEEGNRIPLPVCSGNTVLYSKYAGNDFKGVDGSDYMVLRVSDVMAVLS 255
BLAST of CX287748 vs. ExPASy Swiss-Prot
Match: CH10_CLAM3 (10 kDa chaperonin OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=groS PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 6.883e-17 Identity = 41/80 (51.25%), Postives = 58/80 (72.50%), Query Frame = -3 Query: 154 EAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 393 EAE+TTA GL++ + +KEKP G V+AVGPG +D+ GNR PL +A G+ V+YSKY G + K DG + + L A +V+AV+ Sbjct: 18 EAEQTTASGLVIPDTAKEKPQEGEVVAVGPGRIDDNGNRVPLDVAVGDKVIYSKYGGTEVK-YDGQDLLVLSARDVLAVI 96
BLAST of CX287748 vs. ExPASy Swiss-Prot
Match: CH10_MYCTU (10 kDa chaperonin OS=Mycobacterium tuberculosis GN=groS PE=1 SV=3) HSP 1 Score: 85.5001 bits (210), Expect = 8.990e-17 Identity = 43/82 (52.44%), Postives = 60/82 (73.17%), Query Frame = -3 Query: 151 EAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRK-PLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 393 EAE TTA GL++ + +KEKP GTV+AVGPG DE+G ++ PL +A G+TV+YSKY G + K +G Y+ L A +V+AV+S Sbjct: 19 EAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 99
BLAST of CX287748 vs. ExPASy Swiss-Prot
Match: CH10_MYCTA (10 kDa chaperonin OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=groS PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 8.990e-17 Identity = 43/82 (52.44%), Postives = 60/82 (73.17%), Query Frame = -3 Query: 151 EAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRK-PLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 393 EAE TTA GL++ + +KEKP GTV+AVGPG DE+G ++ PL +A G+TV+YSKY G + K +G Y+ L A +V+AV+S Sbjct: 19 EAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 99
BLAST of CX287748 vs. ExPASy Swiss-Prot
Match: CH10_MYCS2 (10 kDa chaperonin OS=Mycobacterium smegmatis GN=groS PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 8.990e-17 Identity = 43/82 (52.44%), Postives = 60/82 (73.17%), Query Frame = -3 Query: 151 EAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRK-PLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 393 EAE TTA GL++ + +KEKP GTV+AVGPG DE+G ++ PL +A G+TV+YSKY G + K +G Y+ L A +V+AV+S Sbjct: 19 EAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 99
BLAST of CX287748 vs. ExPASy Swiss-Prot
Match: CH10_MYCBT (10 kDa chaperonin OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=groS PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 8.990e-17 Identity = 43/82 (52.44%), Postives = 60/82 (73.17%), Query Frame = -3 Query: 151 EAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRK-PLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 393 EAE TTA GL++ + +KEKP GTV+AVGPG DE+G ++ PL +A G+TV+YSKY G + K +G Y+ L A +V+AV+S Sbjct: 19 EAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 99
BLAST of CX287748 vs. ExPASy Swiss-Prot
Match: CH10_MYCBP (10 kDa chaperonin OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=groS PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 8.990e-17 Identity = 43/82 (52.44%), Postives = 60/82 (73.17%), Query Frame = -3 Query: 151 EAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRK-PLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 393 EAE TTA GL++ + +KEKP GTV+AVGPG DE+G ++ PL +A G+TV+YSKY G + K +G Y+ L A +V+AV+S Sbjct: 19 EAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 99
BLAST of CX287748 vs. ExPASy Swiss-Prot
Match: CH10_MYCBO (10 kDa chaperonin OS=Mycobacterium bovis GN=groS PE=1 SV=4) HSP 1 Score: 85.5001 bits (210), Expect = 8.990e-17 Identity = 43/82 (52.44%), Postives = 60/82 (73.17%), Query Frame = -3 Query: 151 EAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRK-PLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 393 EAE TTA GL++ + +KEKP GTV+AVGPG DE+G ++ PL +A G+TV+YSKY G + K +G Y+ L A +V+AV+S Sbjct: 19 EAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 99
BLAST of CX287748 vs. ExPASy Swiss-Prot
Match: CH10_THEVL (10 kDa chaperonin OS=Thermosynechococcus vulcanus GN=groS PE=3 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 1.174e-16 Identity = 39/82 (47.56%), Postives = 60/82 (73.17%), Query Frame = -3 Query: 154 VAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 399 VAE+EE TAGG+LL + ++EKP +G V AVGPG L E+G R+P+ + G+ V+YSKYAG + K + G +Y+ L +++A++ Sbjct: 22 VAESEERTAGGILLPDNAREKPQVGEVTAVGPGKLTEDGKRQPMDVKVGDKVLYSKYAGTEVKLA-GEDYVLLSEKDILAIV 102 The following BLAST results are available for this feature:
BLAST of CX287748 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 257
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287748 ID=CX287748; Name=CX287748; organism=Citrus clementina; type=EST; length=401bpback to top |