CX287765
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287765 vs. ExPASy Swiss-Prot
Match: VPS41_SOLLC (Vacuolar protein sorting-associated protein 41 homolog OS=Solanum lycopersicum GN=VPS41 PE=2 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 2.020e-40 Identity = 79/91 (86.81%), Postives = 84/91 (92.31%), Query Frame = 3 Query: 63 PRLKYQRMGGSLPSLLANDAASCVAVAERMIALGTHAGTVHILDFLGNQVKEFPAHTAAVNDLSFDVDGEYVGSCSDDGSVVINSLFTDEK 335 PRLKYQRMG S+PSLL+ DAA+C+AVAERMIALGTH G VHILDFLGNQVKEF AHTAAVNDL FD DGEYVGSCSDDGSVVINSLFTDE+ Sbjct: 36 PRLKYQRMGASVPSLLSADAATCIAVAERMIALGTHGGAVHILDFLGNQVKEFAAHTAAVNDLCFDTDGEYVGSCSDDGSVVINSLFTDER 126
BLAST of CX287765 vs. ExPASy Swiss-Prot
Match: VPS41_ARATH (Vacuolar protein sorting-associated protein 41 homolog OS=Arabidopsis thaliana GN=VPS41 PE=2 SV=3) HSP 1 Score: 155.992 bits (393), Expect = 5.500e-38 Identity = 73/91 (80.22%), Postives = 84/91 (92.31%), Query Frame = 3 Query: 63 PRLKYQRMGGSLPSLLANDAASCVAVAERMIALGTHAGTVHILDFLGNQVKEFPAHTAAVNDLSFDVDGEYVGSCSDDGSVVINSLFTDEK 335 PRLKYQRMGG++P+LL+NDAASC+AVA RMIALGTH GTV ILD LGNQVKEF AHTA VND++FD +GEY+GSCSDDGSVVINSLFTD++ Sbjct: 42 PRLKYQRMGGNVPALLSNDAASCIAVAARMIALGTHDGTVRILDLLGNQVKEFRAHTAPVNDINFDTEGEYIGSCSDDGSVVINSLFTDDE 132
BLAST of CX287765 vs. ExPASy Swiss-Prot
Match: VPS41_HUMAN (Vacuolar protein sorting-associated protein 41 homolog OS=Homo sapiens GN=VPS41 PE=2 SV=3) HSP 1 Score: 86.2705 bits (212), Expect = 5.352e-17 Identity = 37/91 (40.66%), Postives = 59/91 (64.84%), Query Frame = 3 Query: 63 PRLKYQRMGGSLPSLLANDAASCVAVAERMIALGTHAGTVHILDFLGNQVKEFPAHTAAVNDLSFDVDGEYVGSCSDDGSVVINSLFTDEK 335 P+LKY+R+ + +L DAASC+ V ++ +ALGTH G V++LD GN ++F +N +S D GE++G CS+DG V + L++ E+ Sbjct: 28 PKLKYERLSNGVTEILQKDAASCMTVHDKFLALGTHYGKVYLLDVQGNITQKFDVSPVKINQISLDESGEHMGVCSEDGKVQVFGLYSGEE 118
BLAST of CX287765 vs. ExPASy Swiss-Prot
Match: VPS41_MOUSE (Vacuolar protein sorting-associated protein 41 homolog OS=Mus musculus GN=Vps41 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.557e-16 Identity = 36/91 (39.56%), Postives = 59/91 (64.84%), Query Frame = 3 Query: 63 PRLKYQRMGGSLPSLLANDAASCVAVAERMIALGTHAGTVHILDFLGNQVKEFPAHTAAVNDLSFDVDGEYVGSCSDDGSVVINSLFTDEK 335 P+LKY+R+ + +L DAASC+ V ++ +ALGTH G V++LD GN ++F +N +S D GE++G CS+DG + + L++ E+ Sbjct: 27 PKLKYERLSNGVTEILQKDAASCMTVHDKFLALGTHYGKVYLLDVQGNITQKFDVSPVKINQISLDDSGEHMGVCSEDGKLQVFGLYSGEE 117 The following BLAST results are available for this feature:
BLAST of CX287765 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX287765 ID=CX287765; Name=CX287765; organism=Citrus clementina; type=EST; length=335bpback to top |