CX287805
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287805 vs. ExPASy Swiss-Prot
Match: ISAM1_ARATH (Iron-sulfur assembly protein IscA-like 1, mitochondrial OS=Arabidopsis thaliana GN=At2g16710 PE=2 SV=2) HSP 1 Score: 181.415 bits (459), Expect = 1.810e-45 Identity = 84/97 (86.60%), Postives = 95/97 (97.94%), Query Frame = 3 Query: 3 LLERRQRPFLRLGVKARGCNGLSYTLNYADEKSKFDEVVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESFMTTSSAEA 293 LL++RQ+PFLRLGVKARGCNGLSYTLNYADEK KFDE+VE+KGV+IL++PKALMHVIGTKMDFVDDKLRSEFVFINPNS+GQCGCGESFMTTS++ A Sbjct: 36 LLQQRQKPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEEKGVRILVEPKALMHVIGTKMDFVDDKLRSEFVFINPNSQGQCGCGESFMTTSTSSA 132
BLAST of CX287805 vs. ExPASy Swiss-Prot
Match: ISAM3_ARATH (Iron-sulfur assembly protein IscA-like 3, mitochondrial OS=Arabidopsis thaliana GN=At2g36260 PE=3 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 2.369e-37 Identity = 72/92 (78.26%), Postives = 84/92 (91.30%), Query Frame = 3 Query: 3 LLERRQRPFLRLGVKARGCNGLSYTLNYADEKSKFDEVVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESFMTT 278 LL+ +Q+PFLRL V+A+GCNGLSY LNYA EK KFDEVVE+KGVKIL+DPKA+MHVIGT+MDFVDDKLRSEFVF+NPN+ +CGCGESF TT Sbjct: 19 LLQHQQKPFLRLAVEAKGCNGLSYVLNYAQEKGKFDEVVEEKGVKILVDPKAVMHVIGTEMDFVDDKLRSEFVFVNPNAT-KCGCGESFTTT 109
BLAST of CX287805 vs. ExPASy Swiss-Prot
Match: ISA1_YEAST (Iron sulfur assembly protein 1 OS=Saccharomyces cerevisiae GN=ISA1 PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 7.149e-26 Identity = 54/90 (60.00%), Postives = 68/90 (75.56%), Query Frame = 3 Query: 3 LLERRQRPFLRLGVKARGCNGLSYTLNYADEKSKFDEVVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESFM 272 LL + + +R+ + RGC+GL+Y L Y E KFDEVVE GVKI+ID KAL +IG++MD++DDKL S+FVF NPNSKG CGCGESFM Sbjct: 160 LLAQPEPKLIRVSARNRGCSGLTYDLQYITEPGKFDEVVEQDGVKIVIDSKALFSIIGSEMDWIDDKLASKFVFKNPNSKGTCGCGESFM 249
BLAST of CX287805 vs. ExPASy Swiss-Prot
Match: Y484_RICPR (Uncharacterized protein RP484 OS=Rickettsia prowazekii GN=RP484 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 2.080e-25 Identity = 49/91 (53.85%), Postives = 72/91 (79.12%), Query Frame = 3 Query: 3 LLERRQRPF--LRLGVKARGCNGLSYTLNYADEKSKFDEVVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 269 L+E+R +P +R+G+K+ GC G +Y + YAD K++FDEVVE+KGV+ILIDPK LM+++G++MD+V+ +S+F F NPN K CGCG+SF Sbjct: 18 LIEKRAKPTFGIRVGIKSGGCAGQTYYVEYADNKNQFDEVVEEKGVRILIDPKTLMYILGSEMDYVETNFKSQFTFTNPNEKANCGCGKSF 108
BLAST of CX287805 vs. ExPASy Swiss-Prot
Match: ISCA1_DICDI (Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Dictyostelium discoideum GN=isca1 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 4.634e-25 Identity = 49/83 (59.04%), Postives = 69/83 (83.13%), Query Frame = 3 Query: 30 LRLGVKARGCNGLSYTLNYADEKSKFDE-VVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESFMT 275 LRLG+K RGC+G+SYTL++A +K+KFDE VV DK + I++D KAL+ VIGT+MD++++ ++ EF+FINPN+ CGCGESF T Sbjct: 43 LRLGIKERGCSGMSYTLDFATQKNKFDETVVADKDINIIVDSKALLSVIGTEMDYIEEPIKKEFIFINPNATNTCGCGESFTT 125
BLAST of CX287805 vs. ExPASy Swiss-Prot
Match: ISCA1_CHICK (Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Gallus gallus GN=ISCA1 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 2.153e-22 Identity = 47/80 (58.75%), Postives = 60/80 (75.00%), Query Frame = 3 Query: 30 LRLGVKARGCNGLSYTLNYADEKSKFDEVVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 269 +++GV+ RGCNGLSYTL Y K DE V GV++ I+ KA + ++GT+MD+V+DKL SEFVF NPN KG CGCGESF Sbjct: 48 VKVGVRTRGCNGLSYTLEYTKSKGDSDEEVVQDGVRVFIEKKAQLTLLGTEMDYVEDKLSSEFVFNNPNIKGTCGCGESF 127
BLAST of CX287805 vs. ExPASy Swiss-Prot
Match: ISCA1_MACFA (Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Macaca fascicularis GN=ISCA1 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 2.811e-22 Identity = 48/89 (53.93%), Postives = 64/89 (71.91%), Query Frame = 3 Query: 3 LLERRQRPFLRLGVKARGCNGLSYTLNYADEKSKFDEVVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 269 L ++ + +++GV+ RGCNGLSYTL Y K DE V GV++ I+ KA + ++GT+MD+V+DKL SEFVF NPN KG CGCGESF Sbjct: 39 LKDKPEHVGVKVGVRTRGCNGLSYTLEYTKTKGDSDEEVIQDGVRVFIEKKAQLTLLGTEMDYVEDKLSSEFVFNNPNIKGTCGCGESF 127
BLAST of CX287805 vs. ExPASy Swiss-Prot
Match: ISCA1_HUMAN (Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Homo sapiens GN=ISCA1 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 2.811e-22 Identity = 48/89 (53.93%), Postives = 64/89 (71.91%), Query Frame = 3 Query: 3 LLERRQRPFLRLGVKARGCNGLSYTLNYADEKSKFDEVVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 269 L ++ + +++GV+ RGCNGLSYTL Y K DE V GV++ I+ KA + ++GT+MD+V+DKL SEFVF NPN KG CGCGESF Sbjct: 39 LKDKPEHVGVKVGVRTRGCNGLSYTLEYTKTKGDSDEEVIQDGVRVFIEKKAQLTLLGTEMDYVEDKLSSEFVFNNPNIKGTCGCGESF 127
BLAST of CX287805 vs. ExPASy Swiss-Prot
Match: ISCA1_BOVIN (Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Bos taurus GN=ISCA1 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 2.811e-22 Identity = 48/89 (53.93%), Postives = 64/89 (71.91%), Query Frame = 3 Query: 3 LLERRQRPFLRLGVKARGCNGLSYTLNYADEKSKFDEVVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 269 L ++ + +++GV+ RGCNGLSYTL Y K DE V GV++ I+ KA + ++GT+MD+V+DKL SEFVF NPN KG CGCGESF Sbjct: 39 LKDKPEHVGVKVGVRTRGCNGLSYTLEYTKTKGDSDEEVIQDGVRVFIEKKAQLTLLGTEMDYVEDKLSSEFVFNNPNIKGTCGCGESF 127
BLAST of CX287805 vs. ExPASy Swiss-Prot
Match: ISCA1_RAT (Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Rattus norvegicus GN=Isca1 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 3.672e-22 Identity = 48/89 (53.93%), Postives = 64/89 (71.91%), Query Frame = 3 Query: 3 LLERRQRPFLRLGVKARGCNGLSYTLNYADEKSKFDEVVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 269 L ++ + L++GV+ RGCNGLSY+L Y K DE V GV++ I+ KA + ++GT+MD+V+DKL SEFVF NPN KG CGCGESF Sbjct: 39 LKDKPEHVGLKVGVRTRGCNGLSYSLEYTKTKGDADEEVIQDGVRVFIEKKAQLTLLGTEMDYVEDKLSSEFVFNNPNIKGTCGCGESF 127 The following BLAST results are available for this feature:
BLAST of CX287805 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 254
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287805 ID=CX287805; Name=CX287805; organism=Citrus clementina; type=EST; length=485bpback to top |