CX287845

Overview
NameCX287845
Unique NameCX287845
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length603
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX287845_ssr548 microsatellite CX287845_ssr548:548..559. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CX287845 vs. ExPASy Swiss-Prot
Match: MET7A_HUMAN (Methyltransferase-like protein 7A OS=Homo sapiens GN=METTL7A PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.015e-29
Identity = 74/173 (42.77%), Postives = 106/173 (61.27%), Query Frame = 2
Query:    2 LEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI-PVRDASVDAVIGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQVVSDGCHLTRQTGNNISEAGFSSVELGNAFLS-NASLISPHVYGIAHK 514
            LE+G GTG N K+Y      +V  +DPN   EK+    ++A    L   +F+ A GE +  V D SVD V+ TLVLCSVK+ +  L+EV RVL+PGG + F+EHVAA+  T+  FWQ V+DP   ++ DGC+LTR++   +  A FS ++L +     +  L+ PH+YG A K
Sbjct:   75 LEVGCGTGANFKFYPPGC--RVTCIDPNPNFEKFL-IKSIAENRHLQFERFVVAAGENMHQVADGSVDVVVCTLVLCSVKNQERILREVCRVLRPGGAFYFMEHVAAECSTWNYFWQQVLDPAWHLLFDGCNLTRESWKALERASFSKLKLQHIQAPLSWELVRPHIYGYAVK 244          
BLAST of CX287845 vs. ExPASy Swiss-Prot
Match: MET7B_RAT (Methyltransferase-like protein 7B OS=Rattus norvegicus GN=Mettl7b PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.401e-26
Identity = 67/151 (44.37%), Postives = 93/151 (61.59%), Query Frame = 2
Query:    2 LEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP-VRDASVDAVIGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQVVSDGCHLTRQTGNNISEAGFSSVEL 451
            LE+G GTG N ++Y     V    VDPN   EK+  T ++A    L   +F+ A GE +  + D+S+D V+ TLVLCSV+     LQEV+RVLKPGG+  F EHV+   G+    WQ V++P  + + DGCHLTR+T  +I +A FS V+L
Sbjct:   75 LELGCGTGANFQFYPPGCKVTC--VDPNPNFEKFL-TKSMAENRHLQYERFIVAYGENMKQLADSSMDVVVCTLVLCSVQSPRKVLQEVQRVLKPGGLLFFWEHVSEPQGSQALLWQRVLEPTWKHIGDGCHLTRETWKDIEKAQFSEVQL 222          
BLAST of CX287845 vs. ExPASy Swiss-Prot
Match: MET7B_MOUSE (Methyltransferase-like protein 7B OS=Mus musculus GN=Mettl7b PE=2 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 2.389e-26
Identity = 67/151 (44.37%), Postives = 92/151 (60.93%), Query Frame = 2
Query:    2 LEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP-VRDASVDAVIGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQVVSDGCHLTRQTGNNISEAGFSSVEL 451
            LE+G GTG N ++Y     V    VDPN   EK+  T ++A    L   +F+ A GE +  + D+S+D V+ TLVLCSV+     LQEV+RVL+PGG+  F EHVA   G+    WQ V++P  + + DGCHLTR+T  +I  A FS V+L
Sbjct:   75 LELGCGTGANFQFYPQGCKVTC--VDPNPNFEKFL-TKSMAENRHLQYERFIVAYGENMKQLADSSMDVVVCTLVLCSVQSPRKVLQEVQRVLRPGGLLFFWEHVAEPQGSRAFLWQRVLEPTWKHIGDGCHLTRETWKDIERAQFSEVQL 222          
BLAST of CX287845 vs. ExPASy Swiss-Prot
Match: MET7B_HUMAN (Methyltransferase-like protein 7B OS=Homo sapiens GN=METTL7B PE=2 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.004e-24
Identity = 70/173 (40.46%), Postives = 98/173 (56.65%), Query Frame = 2
Query:    2 LEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI-PVRDASVDAVIGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQVVSDGCHLTRQTGNNISEAGFSSVELGNAFLSNASL-ISPHVYGIAHK 514
            LE+G GTG N ++Y     V  L  DPN   EK+  T ++A    L   +F+ A GE +  + D S+D V+ TLVLCSV+     LQEVRRVL+PGG+  F EHVA   G++   WQ V +P  + + DGC LTR+T  ++  A FS +++         L + PH+ G A K
Sbjct:   75 LELGCGTGANFQFYPPGCRVTCL--DPNPHFEKFL-TKSMAENRHLQYERFVVAPGEDMRQLADGSMDVVVCTLVLCSVQSPRKVLQEVRRVLRPGGVLFFWEHVAEPYGSWAFMWQQVFEPTWKHIGDGCCLTRETWKDLENAQFSEIQMERQPPPLKWLPVGPHIMGKAVK 244          
The following BLAST results are available for this feature:
BLAST of CX287845 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
MET7A_HUMAN3.015e-2942.77Methyltransferase-like protein 7A OS=Homo sapiens ... [more]
MET7B_RAT1.401e-2644.37Methyltransferase-like protein 7B OS=Rattus norveg... [more]
MET7B_MOUSE2.389e-2644.37Methyltransferase-like protein 7B OS=Mus musculus ... [more]
MET7B_HUMAN1.004e-2440.46Methyltransferase-like protein 7B OS=Homo sapiens ... [more]
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Properties
Property NameValue
Genbank descriptionC01014A03SK Veg1 Citrus clementina cDNA clone C01014A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287845 ID=CX287845; Name=CX287845; organism=Citrus clementina; type=EST; length=603bp
GTTGGAGATTGGCATTGGAACCGGCCCTAATCTCAAGTACTATGCTGCTG
ATACTGATGTGCAAGTTCTTGGTGTGGATCCGAACAGAAAAATGGAAAAG
TATGCACAGACAGCTGCGGTGGCCGCCGGTTTGCCTCTCACAAACTTCAA
ATTTTTACAAGCCGTTGGGGAGGCAATTCCAGTAAGGGACGCATCTGTTG
ATGCTGTTATTGGAACACTTGTATTGTGTTCTGTGAAAGATGTTGACATG
ACACTACAAGAAGTGCGGAGGGTGCTGAAACCAGGGGGCATTTACTTATT
TGTGGAACATGTTGCGGCAAAAGATGGAACGTTTCTTAAATTTTGGCAGA
ATGTCGTCGATCCTTTGCAGCAAGTAGTGTCCGACGGTTGTCACCTTACT
AGACAAACAGGGAATAATATATCTGAAGCGGGCTTTTCATCTGTGGAACT
TGGCAATGCATTCTTGTCTAATGCATCACTCATAAGTCCTCATGTCTACG
GAATTGCTCATAAATAGTAAAGTAATAAATTTTGTTTCTTTTAACTAAAT
AATAATAATAAAACTCAATGAAGCTATAAATTAATTAAAAAAAAAAAAAA
AAA
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