CX287897

Overview
NameCX287897
Unique NameCX287897
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length416
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15247 contig Ccv1_Contig15247:481..896. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX287897 vs. ExPASy Swiss-Prot
Match: WNK5_ARATH (Probable serine/threonine-protein kinase WNK5 OS=Arabidopsis thaliana GN=WNK5 PE=1 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 1.106e-38
Identity = 85/141 (60.28%), Postives = 101/141 (71.63%), Query Frame = 1
Query:    4 AFHRIQDAEARRFVGKCLENVSKRLPAKELLLDPFLAS----DAGEPLLIPQVPSFQNLNPNGAVMELVPKFAVDSDRRKSTDMTITGTMNPEDDTIFLKVQITDKDGQARNIYFPFDIFNDTATEVALEMVKELEITDWE 414
            +FH IQ  EA+RFVGKCLE VS+RLPAKELL DPFLA+    D      +PQ  + QNL  NG V+E +P     +D  ++TDM+ITG MN ED TIFL+VQI D DG  RNI FPF+I +DT  EVALEMVKELEITDW+
Sbjct:  248 SFHLIQHTEAQRFVGKCLETVSRRLPAKELLADPFLAATDERDLAPLFRLPQQLAIQNLAANGTVVEHLPS---TTDPTRTTDMSITGKMNSEDHTIFLQVQILDGDGHMRNIQFPFNILSDTPLEVALEMVKELEITDWD 385          
BLAST of CX287897 vs. ExPASy Swiss-Prot
Match: WNK4_ARATH (Probable serine/threonine-protein kinase WNK4 OS=Arabidopsis thaliana GN=WNK4 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.691e-27
Identity = 67/138 (48.55%), Postives = 85/138 (61.59%), Query Frame = 1
Query:    1 GAFHRIQDAEARRFVGKCLENVSKRLPAKELLLDPFLASDAGEPLLIPQVPSFQNLNPNGAVMELVPKFAVDSDRRKSTDMTITGTMNPEDDTIFLKVQITDKDGQARNIYFPFDIFNDTATEVALEMVKELEITDWE 414
            GAF+R+ D EA+RF+GKCL + SKR+ AKELL DPFLASD    +           NP   + E         D    T+M+I G +  ED+ I L+VQI   +G A N++FPFDI NDT+ +VA EMVKELEI DWE
Sbjct:  241 GAFYRVGDIEAQRFIGKCLVSASKRVSAKELLQDPFLASDESWMVYTSGAG-----NPKPFLNENEMDTLKLEDDELRTEMSIAGKLGAEDNKIDLEVQIAYDNGLANNVFFPFDIMNDTSIDVAKEMVKELEIIDWE 373          
BLAST of CX287897 vs. ExPASy Swiss-Prot
Match: WNK7_ORYSJ (Probable serine/threonine-protein kinase WNK7 OS=Oryza sativa subsp. japonica GN=WNK7 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 1.550e-24
Identity = 72/149 (48.32%), Postives = 86/149 (57.72%), Query Frame = 1
Query:    4 AFHRIQDAEARRFVGKCLENVSKRLPAKELLLDPFL------------ASDAGEPLLIPQVPSFQNLNPNGAVMELVPKFAVDSDRRKSTDMTITGTMNPEDDTIFLKVQITDKDGQARNIYFPFDIFNDTATEVALEMVKELEITDWE 414
            AF+R+ DA+ARRF+G+CL + + R  A+ELLLDPFL            A     P  +P   S    N +    E  P  A      K+TDM ITG +N E DTIFLKVQI       RNIYFPFD+ NDTA EVA EMVKEL+I D E
Sbjct:  256 AFYRLTDADARRFIGRCLVDAAHRPSAEELLLDPFLSPSQNHDDHNIIAHATAPPPPLPLACS----NSSEEQEEAAPAPAA-----KTTDMAITGKLNKEHDTIFLKVQIGG-GRNVRNIYFPFDVANDTAMEVATEMVKELDIADRE 394          
BLAST of CX287897 vs. ExPASy Swiss-Prot
Match: WNK8_ORYSJ (Probable serine/threonine-protein kinase WNK8 OS=Oryza sativa subsp. japonica GN=WNK8 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.312e-23
Identity = 65/139 (46.76%), Postives = 84/139 (60.43%), Query Frame = 1
Query:    4 AFHRIQDAEARRFVGKCLENVSKRLPAKELLLDPFLA--SDAGEPLLIPQVPSFQNLNPNGAVMELVPKFAVDSDRRKSTDMTITGTMNPEDDTIFLKVQITDKDGQARNIYFPFDIFNDTATEVALEMVKELEITDWE 414
            AF+ + DA+ARRF+G+CL + + R  A+ELLLDPFL+   +  +   I    +     P         +   ++   K+T M ITG +N E DTIFLKVQI    G  RNIYFPFD+ NDTA EVA EMVKEL+I D E
Sbjct:  256 AFYLLTDADARRFIGRCLVDAAHRPSAEELLLDPFLSPPQNHDDHNTIAHATAPPPPLPLACSNSSEEQEEEEAPAAKTTGMAITGKLNKEHDTIFLKVQIGG-GGNVRNIYFPFDVANDTAMEVATEMVKELDIADRE 393          
BLAST of CX287897 vs. ExPASy Swiss-Prot
Match: WNK2_ARATH (Serine/threonine-protein kinase WNK2 OS=Arabidopsis thaliana GN=WNK2 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.450e-19
Identity = 58/154 (37.66%), Postives = 83/154 (53.90%), Query Frame = 1
Query:    4 AFHRIQDAEARRFVGKCLENVSKRLPAKELLLDPFLASDAGEPLLIPQVPSFQNLNPNGAVMEL-------------------VPKFAVDSDRRKSTDMTITGTMNPEDDTIFLKVQITDKDGQARNIYFPFDIFNDTATEVALEMVKELEITD 408
            AF+ ++D E R FV KCL NV+ RL A ELL DPFL  D  +  ++  +  +   +  G  +                     +  FA D +     D++I G  N  DD IFL+++I+D +G+ RNIYFPF+   DTA  VA+EMV EL+IT+
Sbjct:  246 AFYLVKDPEVREFVEKCLANVTCRLTALELLQDPFLQDDNMDGFVMRPIDYYNGYDETGVFLRHPLIDDPLYHDQFESSQICEIDLFANDDEDH--VDISIKGKRNG-DDGIFLRLRISDAEGRIRNIYFPFETAIDTAWSVAVEMVSELDITN 396          
BLAST of CX287897 vs. ExPASy Swiss-Prot
Match: WNK1_ORYSJ (Probable serine/threonine-protein kinase WNK1 OS=Oryza sativa subsp. japonica GN=WNK1 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.307e-18
Identity = 63/174 (36.21%), Postives = 87/174 (50.00%), Query Frame = 1
Query:    4 AFHRIQDAEARRFVGKCLENVSKRLPAKELLLDPFLASDA-------GEPLLIPQV--PSFQNLNPNGAVMELVPKFAVDSDRRK----------------------------STDMTITGTMNPEDDTIFLKVQITDKDGQARNIYFPFDIFNDTATEVALEMVKELEITDWE 414
            A ++++D   R+FV KCL   S+RL A+ELL DPFL  D        G+  L+  +  P  ++   N ++M      ++D D                               + D+TI G  + ED +IFL+++I D DG  RNIYFPFDI  DTA  VA EMV EL+ITD E
Sbjct:  249 ALYKVKDPMVRQFVEKCLATASRRLSARELLKDPFLQVDDLVFCPGDGDYSLMNYLRQPYLEHAYSNVSMMSNGLSESIDEDTPTEDRWDCEDDDIKADGIDLFNGHEDEPLGNVDITIKGRKS-EDGSIFLRLRIADNDGHVRNIYFPFDIEADTALSVATEMVAELDITDHE 421          
BLAST of CX287897 vs. ExPASy Swiss-Prot
Match: WNK1_ORYSI (Probable serine/threonine-protein kinase WNK1 OS=Oryza sativa subsp. indica GN=WNK1 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 6.307e-18
Identity = 63/174 (36.21%), Postives = 87/174 (50.00%), Query Frame = 1
Query:    4 AFHRIQDAEARRFVGKCLENVSKRLPAKELLLDPFLASDA-------GEPLLIPQV--PSFQNLNPNGAVMELVPKFAVDSDRRK----------------------------STDMTITGTMNPEDDTIFLKVQITDKDGQARNIYFPFDIFNDTATEVALEMVKELEITDWE 414
            A ++++D   R+FV KCL   S+RL A+ELL DPFL  D        G+  L+  +  P  ++   N ++M      ++D D                               + D+TI G  + ED +IFL+++I D DG  RNIYFPFDI  DTA  VA EMV EL+ITD E
Sbjct:  249 ALYKVKDPMVRQFVEKCLATASRRLSARELLKDPFLQVDDLVFCPGDGDYSLMNYLRQPYLEHAYSNVSMMSNGLSESIDEDTPTEDRWDCEDDDIKADGIDLFNGHEDEPLGNVDITIKGRKS-EDGSIFLRLRIADNDGHVRNIYFPFDIEADTALSVATEMVAELDITDHE 421          
BLAST of CX287897 vs. ExPASy Swiss-Prot
Match: WNK3_ARATH (Probable serine/threonine-protein kinase WNK3 OS=Arabidopsis thaliana GN=WNK3 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.189e-16
Identity = 56/135 (41.48%), Postives = 76/135 (56.30%), Query Frame = 1
Query:    4 AFHRIQDAEARRFVGKCLENVSKRLPAKELLLDPFLASDAGEPLLIPQVPSFQNLNPNGAVMELVPKFAVDSDRRKSTDMTITGTMNPEDDTIFLKVQITDKDGQARNIYFPFDIFNDTATEVALEMVKELEITD 408
            A   + D + R F+ KC+  VS+RL AKELL DPFL         +         N NG V +L       SD      +T+ G    + +TIFLK++ITD  GQ RNI+FPF+I  DT+  VA+EMV+EL++TD
Sbjct:  245 ALLNVTDPQVRAFIEKCIAKVSQRLSAKELLDDPFLKCYKENTENVSSHKE-NGYNGNGIVDKL-------SDSEVGL-LTVEG-QRKDLNTIFLKLRITDSKGQIRNIHFPFNIETDTSFSVAIEMVEELDLTD 369          
BLAST of CX287897 vs. ExPASy Swiss-Prot
Match: WNK2_ORYSJ (Probable serine/threonine-protein kinase WNK2 OS=Oryza sativa subsp. japonica GN=WNK2 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.650e-16
Identity = 58/164 (35.37%), Postives = 83/164 (50.61%), Query Frame = 1
Query:   13 RIQDAEARRFVGKCLENVSKRLPAKELLLDPFLASDAGEPLLIPQVPSFQNLNPNG-----------------AVMELVPKFAVDSDRRKSTDMTITGTMNPED---------------DTIFLKVQITDKDGQARNIYFPFDIFNDTATEVALEMVKELEITD 408
            +I+D E R F+ KC+   S+RL A+ELL+DPFL  D GE +  P   + +  +  G                 A+ E    FA +      +D  I  TM+P+                +TIFLK++I D  G A+NI+FPFDI  DT+  VA EMV +L++TD
Sbjct:  254 KIEDPEVRFFIEKCIAKASQRLSAQELLMDPFLRDD-GEKIFYPLQSNTKASDGAGSSNSSMGYKYDRDASSMAIREHTGSFAEEHP----SDRYIHSTMDPQAAAGRIITVESQMKDLNTIFLKLRIADSTGHAQNIHFPFDIEADTSISVATEMVVQLDLTD 412          
BLAST of CX287897 vs. ExPASy Swiss-Prot
Match: WNK6_ORYSJ (Probable serine/threonine-protein kinase WNK6 OS=Oryza sativa subsp. japonica GN=WNK6 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.315e-15
Identity = 53/152 (34.87%), Postives = 80/152 (52.63%), Query Frame = 1
Query:    4 AFHRIQDAEARRFVGKCLENVSKRLPAKELLLDPFLASD---------AGEPLLIPQ------VPSFQNLNP-NGAVMELVPKFAVDSDRRKSTDMTITGTMNPEDDTIFLKVQITDKDGQARNIYFPFDIFNDTATEVALEMVKELEITDW 411
            A  +++DAE R F+  CL +VS RLPA ELL  PFL SD           EP+  P+       P F +L P NG V      F +   +   +D  + G M+   + + L ++    DG+ +N+ FPFD+  DT+  V+ EMV++LE+ +W
Sbjct:  258 ALSKVKDAEVRGFIESCLASVSDRLPASELLKSPFLQSDDANHRSSNSVQEPVKFPENNFTKDEPIFVSLAPNNGTVNGKEQSFILVLQK---SDFLLEGNMS-TTNPVMLFLRFPGPDGKFKNVQFPFDMEKDTSLSVSTEMVEQLELPEW 405          
The following BLAST results are available for this feature:
BLAST of CX287897 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
WNK5_ARATH1.106e-3860.28Probable serine/threonine-protein kinase WNK5 OS=A... [more]
WNK4_ARATH5.691e-2748.55Probable serine/threonine-protein kinase WNK4 OS=A... [more]
WNK7_ORYSJ1.550e-2448.32Probable serine/threonine-protein kinase WNK7 OS=O... [more]
WNK8_ORYSJ1.312e-2346.76Probable serine/threonine-protein kinase WNK8 OS=O... [more]
WNK2_ARATH7.450e-1937.66Serine/threonine-protein kinase WNK2 OS=Arabidopsi... [more]
WNK1_ORYSJ6.307e-1836.21Probable serine/threonine-protein kinase WNK1 OS=O... [more]
WNK1_ORYSI6.307e-1836.21Probable serine/threonine-protein kinase WNK1 OS=O... [more]
WNK3_ARATH1.189e-1641.48Probable serine/threonine-protein kinase WNK3 OS=A... [more]
WNK2_ORYSJ2.650e-1635.37Probable serine/threonine-protein kinase WNK2 OS=O... [more]
WNK6_ORYSJ1.315e-1534.87Probable serine/threonine-protein kinase WNK6 OS=O... [more]
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Properties
Property NameValue
Genbank descriptionC01014E11SK Veg1 Citrus clementina cDNA clone C01014E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287897 ID=CX287897; Name=CX287897; organism=Citrus clementina; type=EST; length=416bp
GGAGCATTCCACAGAATTCAAGATGCAGAGGCACGGCGTTTTGTGGGGAA
ATGTTTGGAGAATGTTTCAAAAAGGTTACCAGCTAAAGAGCTCTTGCTCG
ACCCGTTTCTAGCTTCTGATGCAGGGGAGCCCTTGCTTATCCCACAAGTC
CCAAGTTTTCAAAATTTAAATCCTAATGGAGCAGTGATGGAGCTAGTGCC
AAAGTTTGCGGTTGATTCTGATCGAAGGAAGAGTACTGATATGACCATAA
CAGGCACAATGAATCCTGAAGATGATACAATTTTCCTGAAAGTACAGATT
ACAGACAAAGATGGTCAAGCTAGAAACATATACTTCCCCTTTGACATTTT
CAATGATACTGCAACTGAAGTTGCCTTGGAGATGGTGAAAGAATTGGAGA
TTACTGATTGGGAACC
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