CX287916

Overview
NameCX287916
Unique NameCX287916
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length393
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12734 contig Ccv1_Contig12734:529..921. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX287916 vs. ExPASy Swiss-Prot
Match: QORX_HUMAN (Quinone oxidoreductase PIG3 OS=Homo sapiens GN=TP53I3 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 2.304e-20
Identity = 54/130 (41.54%), Postives = 80/130 (61.54%), Query Frame = 1
Query:   10 LVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLDSLNIDGRLFIIGTQGGAKTELN---ITSLFAKRLTVQAAGLRSRSTE 390
            L+H G SG+GT AIQ+ +  G    VTAGS++KL + + LGA    NYK EDF     + T G GV++ILDC+G SY+++N++ L +DGR  + G  GG   ++N    + L  KR ++  + LRSR  +
Sbjct:  145 LIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGG--DINGPLFSKLLFKRGSLITSLLRSRDNK 272          
BLAST of CX287916 vs. ExPASy Swiss-Prot
Match: QOR_ECOLI (Quinone oxidoreductase OS=Escherichia coli (strain K12) GN=qor PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.493e-15
Identity = 44/115 (38.26%), Postives = 60/115 (52.17%), Query Frame = 1
Query:    1 EAFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLDSLNIDGRLFIIGTQGGAKTELNITSLFAK 345
            E FL H  + G+G  A Q  K  G ++  T G+ +K       GA   INY+ ED V R+KE TGGK V V+ D +G   ++R+LD L   G +   G   GA T +N+  L  K
Sbjct:  142 EQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQK 256          
BLAST of CX287916 vs. ExPASy Swiss-Prot
Match: QOR_CAVPO (Quinone oxidoreductase OS=Cavia porcellus GN=CRYZ PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.481e-15
Identity = 44/130 (33.85%), Postives = 68/130 (52.31%), Query Frame = 1
Query:    1 EAFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLDSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTE 390
            E+ LVHG S G+G  A Q+ +  G++V  TAG+EE   V    GA    N++   ++  +K+  G KGVDVI++ +       +L  L+  GR+ I+G +G    E+N     AK  T+    L S + E
Sbjct:  150 ESVLVHGASGGVGLAACQIARAYGLKVLGTAGTEEGQKVVLQNGAHEVFNHRDAHYIDEIKKSIGEKGVDVIIEMLANVNLSNDLKLLSCGGRVIIVGCRG--SIEINPRDTMAKESTISGVSLFSSTKE 277          
BLAST of CX287916 vs. ExPASy Swiss-Prot
Match: QOR_RAT (Quinone oxidoreductase OS=Rattus norvegicus GN=Cryz PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.108e-14
Identity = 42/130 (32.31%), Postives = 68/130 (52.31%), Query Frame = 1
Query:    1 EAFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLDSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTE 390
            E+ LVHG S G+G    Q+ +  G++V  TAGSEE   +    GA    N+K  +++ ++K   G KGVDVI++ +       +L  L+  GR+ ++G +G    E+N     AK  ++    L S + E
Sbjct:  150 ESVLVHGASGGVGLATCQIARAHGLKVLGTAGSEEGKKLVLQNGAHEVFNHKEANYIDKIKTSAGDKGVDVIIEMLANKNLSNDLKLLSCGGRVIVVGCRG--SIEINPRDTMAKETSIIGVSLFSSTKE 277          
BLAST of CX287916 vs. ExPASy Swiss-Prot
Match: QOR_BOVIN (Zeta-crystallin OS=Bos taurus GN=CRYZ PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 1.108e-14
Identity = 41/130 (31.54%), Postives = 72/130 (55.38%), Query Frame = 1
Query:    1 EAFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLDSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTE 390
            E+ LVHG S G+G  A Q+ +  G++V  TA +EE   +  + GA    N+K  D++ ++K+  G KGVDVI++ +       +L+ L+  GR+ ++G++G    E+N      K  +++   L S + E
Sbjct:  150 ESVLVHGASGGVGIAACQIARAYGLKVLGTASTEEGQKIVLENGAHKVFNHKEADYIDKIKKSVGEKGVDVIIEMLANVNLSNDLNLLSHGGRVIVVGSRG--TIEINPRDTMTKESSIKGVTLFSSTKE 277          
BLAST of CX287916 vs. ExPASy Swiss-Prot
Match: QOR_SALTY (Quinone oxidoreductase OS=Salmonella typhimurium GN=qor PE=3 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 1.447e-14
Identity = 47/126 (37.30%), Postives = 64/126 (50.79%), Query Frame = 1
Query:    1 EAFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLDSLNIDGRLFIIGTQGGAKTELNI------TSLFAKRLTVQ 360
            E FL H  + G+G  A Q  K  G ++  T GS +K     D GA   INY+ E  V RVKE TGGK V V+ D +G   ++ +LD L   G +   G   G  T +N+       SL+A R ++Q
Sbjct:  142 EPFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRALDAGAWQVINYREESIVERVKEITGGKKVRVVYDSVGKDTWEASLDCLQRRGLMVSFGNASGPVTGVNLGILNQKGSLYATRPSLQ 267          
BLAST of CX287916 vs. ExPASy Swiss-Prot
Match: QOR_PIG (Quinone oxidoreductase OS=Sus scrofa GN=CRYZ PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.376e-14
Identity = 39/130 (30.00%), Postives = 71/130 (54.62%), Query Frame = 1
Query:    1 EAFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLDSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTE 390
            E  L+HG S G+G  A Q+ +  G++V  TAG+EE   +    GA    N++  +++ ++K+  G KG+DVI++ +       +L+ L+  GR+ I+G++G    E+N      K  +++   L S + E
Sbjct:  150 EIVLIHGASGGVGIAACQIARAYGLKVLGTAGTEEGQNIVLQNGAHEVFNHREVNYIDKIKKSVGEKGIDVIIEMLANVNLSNDLNLLSHGGRVIIVGSRG--PIEINPRDTMTKGSSIKGVALYSSTKE 277          
BLAST of CX287916 vs. ExPASy Swiss-Prot
Match: QOR_HUMAN (Quinone oxidoreductase OS=Homo sapiens GN=CRYZ PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.225e-13
Identity = 38/130 (29.23%), Postives = 72/130 (55.38%), Query Frame = 1
Query:    1 EAFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLDSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTE 390
            E+ LVHG S G+G  A Q+ +  G+++  TAG+EE   +    GA    N++  +++ ++K+  G KG+D+I++ +      ++L  L+  GR+ ++G++G    E+N     AK  ++    L S + E
Sbjct:  150 ESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRG--TIEINPRDTMAKESSIIGVTLFSSTKE 277          
BLAST of CX287916 vs. ExPASy Swiss-Prot
Match: QOR_PONAB (Quinone oxidoreductase OS=Pongo abelii GN=CRYZ PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.653e-13
Identity = 38/130 (29.23%), Postives = 72/130 (55.38%), Query Frame = 1
Query:    1 EAFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLDSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTE 390
            E+ LVHG S G+G  A Q+ +  G++V  TAG+EE   +    GA    N++  +++ ++K+  G KG+DVI++ +      ++L  L+  G++ ++G++G    E+N     AK  ++    + S + E
Sbjct:  150 ESVLVHGASGGVGLAACQIARAYGLKVLGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDVIIEMLANVNLNKDLSLLSHGGQVIVVGSRG--TIEINPRDTMAKESSIIGVTVFSSTKE 277          
BLAST of CX287916 vs. ExPASy Swiss-Prot
Match: QOR_MOUSE (Quinone oxidoreductase OS=Mus musculus GN=Cryz PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.938e-13
Identity = 42/132 (31.82%), Postives = 68/132 (51.52%), Query Frame = 1
Query:    1 EAFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG--GKGVDVILDCMGASYFQRNLDSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTE 390
            E+ LVHG S G+G    Q+ +  G++V  TAGSEE   +    GA    N+K  +++ ++K   G   KGVDVI++ +       +L  L+  GR+ ++G +G    E+N     AK  ++    L S + E
Sbjct:  150 ESVLVHGASGGVGLATCQIARAHGLKVLGTAGSEEGKKLVLQNGAHEVFNHKEANYIDKIKMSVGDKDKGVDVIIEMLANENLSNDLKLLSHGGRVVVVGCRG--PIEINPRDTMAKETSIIGVSLSSSTKE 279          
The following BLAST results are available for this feature:
BLAST of CX287916 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
QORX_HUMAN2.304e-2041.54Quinone oxidoreductase PIG3 OS=Homo sapiens GN=TP5... [more]
QOR_ECOLI6.493e-1538.26Quinone oxidoreductase OS=Escherichia coli (strain... [more]
QOR_CAVPO8.481e-1533.85Quinone oxidoreductase OS=Cavia porcellus GN=CRYZ ... [more]
QOR_RAT1.108e-1432.31Quinone oxidoreductase OS=Rattus norvegicus GN=Cry... [more]
QOR_BOVIN1.108e-1431.54Zeta-crystallin OS=Bos taurus GN=CRYZ PE=2 SV=2[more]
QOR_SALTY1.447e-1437.30Quinone oxidoreductase OS=Salmonella typhimurium G... [more]
QOR_PIG9.376e-1430.00Quinone oxidoreductase OS=Sus scrofa GN=CRYZ PE=2 ... [more]
QOR_HUMAN1.225e-1329.23Quinone oxidoreductase OS=Homo sapiens GN=CRYZ PE=... [more]
QOR_PONAB4.653e-1329.23Quinone oxidoreductase OS=Pongo abelii GN=CRYZ PE=... [more]
QOR_MOUSE7.938e-1331.82Quinone oxidoreductase OS=Mus musculus GN=Cryz PE=... [more]

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Properties
Property NameValue
Genbank descriptionC01014G06SK Veg1 Citrus clementina cDNA clone C01014G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287916 ID=CX287916; Name=CX287916; organism=Citrus clementina; type=EST; length=393bp
GAGGCATTTCTGGTTCATGGGGGCTCTAGTGGAATTGGTACATTTGCGAT
TCAGATGGGAAAATGCCAAGGAGTGAGAGTCTTTGTTACAGCAGGAAGTG
AGGAAAAGCTGGCTGTTTGCAAGGATCTTGGTGCGGATGTGTGCATCAAT
TACAAGACTGAGGATTTTGTTGCACGAGTGAAGGAAGAAACTGGTGGTAA
AGGTGTTGATGTAATTCTAGATTGCATGGGAGCATCCTACTTTCAGCGTA
ACCTCGACAGCTTGAACATTGATGGGAGGCTTTTCATAATTGGAACCCAG
GGTGGAGCTAAAACAGAATTAAATATAACTTCTCTGTTTGCTAAGCGCCT
CACTGTGCAAGCGGCTGGCTTGCGAAGCAGAAGTACAGAAAAC
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