CX287917

Overview
NameCX287917
Unique NameCX287917
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length410
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5799 contig Ccv1_Contig5799:281..690. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: BGL01_ORYSJ (Beta-glucosidase 1 OS=Oryza sativa subsp. japonica GN=BGLU1 PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 5.493e-62
Identity = 106/135 (78.52%), Postives = 121/135 (89.63%), Query Frame = 1
Query:    4 GTRIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            G  IWD F K PG +ANNAT DV+VD+YHRYKEDV+IM ++ FDAYRFSISWSRIFP GTGKVNWKGVAYYN+LINY+LK GITPYANLYHYDLPEALE +Y GLL++++V+ FADYA+FCFKTFGDRVKNWMTF
Sbjct:   79 GPSIWDAFVKTPGEIANNATADVTVDEYHRYKEDVNIMKSMGFDAYRFSISWSRIFPTGTGKVNWKGVAYYNRLINYMLKIGITPYANLYHYDLPEALEVQYGGLLNRKIVEAFADYAEFCFKTFGDRVKNWMTF 213          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: BGL44_ARATH (Beta-glucosidase 44 OS=Arabidopsis thaliana GN=BGLU44 PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 1.598e-61
Identity = 104/135 (77.04%), Postives = 120/135 (88.89%), Query Frame = 1
Query:    4 GTRIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            G  IWD F K PG +A NAT +++VDQYHRYKEDVD+M  LNFDAYRFSISWSRIFP G+GKVNWKGVAYYN+LI+Y++++GITPYANLYHYDLP ALE KY GLL ++VVKDFADYA+FC+KTFGDRVKNWMTF
Sbjct:   69 GPSIWDAFVKIPGKIAKNATAEITVDQYHRYKEDVDLMKKLNFDAYRFSISWSRIFPEGSGKVNWKGVAYYNRLIDYMVQKGITPYANLYHYDLPLALENKYKGLLGRQVVKDFADYAEFCYKTFGDRVKNWMTF 203          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: BGL26_ORYSJ (Beta-glucosidase 26 OS=Oryza sativa subsp. japonica GN=BGLU26 PE=1 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 2.235e-55
Identity = 95/135 (70.37%), Postives = 114/135 (84.44%), Query Frame = 1
Query:    4 GTRIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            G  IWD F +KPG + NNAT DV+VD+YHRYKEDV+IM N+ FDAYRFSISWSRIFP GTG VN +GV YYN+LI+Y++K+GI PYANLYHYDLP AL ++Y+G LS  +V+ FADYADFCF+TFGDRVK+W TF
Sbjct:   70 GPSIWDAFIEKPGTIPNNATADVTVDEYHRYKEDVNIMKNMGFDAYRFSISWSRIFPNGTGMVNQEGVDYYNRLIDYMVKKGIKPYANLYHYDLPLALHEQYLGWLSPNIVEAFADYADFCFQTFGDRVKDWFTF 204          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: BGL07_ORYSJ (Beta-glucosidase 7 OS=Oryza sativa subsp. japonica GN=BGLU7 PE=1 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 7.191e-54
Identity = 96/135 (71.11%), Postives = 110/135 (81.48%), Query Frame = 1
Query:    4 GTRIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            G  IWD FA  PG VA N  GDV+ DQYHRYKEDV++M +LNFDAYRFSISWSRIFP G G+VN +GVAYYN LINYLL++GITPY NLYHYDLP ALEKKY G L+ ++   F +YADFCFKTFG+RVK+W TF
Sbjct:   68 GPSIWDAFAHTPGNVAGNQNGDVATDQYHRYKEDVNLMKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTF 202          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: BGL43_ARATH (Beta-glucosidase 43 OS=Arabidopsis thaliana GN=BGLU43 PE=2 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 1.148e-51
Identity = 95/135 (70.37%), Postives = 110/135 (81.48%), Query Frame = 1
Query:    4 GTRIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            G  IWD F K PG +ANNAT +++VDQYHRYKEDVD+M NLN DAYRFSISWSRIFP G+GK+N  GVAYYN+LI+YL+++GITPYANLYHYDLP ALE+KY GLLSK+    F       F+TFGDRVKNWMTF
Sbjct:   60 GPSIWDAFVKIPGKIANNATAEITVDQYHRYKEDVDLMQNLNIDAYRFSISWSRIFPEGSGKINSNGVAYYNRLIDYLIEKGITPYANLYHYDLPLALEQKYQGLLSKQ--GRFCGLRRVLFQTFGDRVKNWMTF 192          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: BGL08_ORYSJ (Beta-glucosidase 8 OS=Oryza sativa subsp. japonica GN=BGLU8 PE=1 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 1.148e-51
Identity = 90/135 (66.67%), Postives = 108/135 (80.00%), Query Frame = 1
Query:    4 GTRIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            G  IWD F   PG +A N   DV+ D+YHRYKEDVD++ +LNFDAYRFSISWSRIFP G GKVN +GVAYYN LI+Y++K+G+ PY NL HYDLP AL+KKY G LS ++V  F+DYA+FCFKT+GDRVKNW TF
Sbjct:   75 GPSIWDPFVHTPGNIAGNGNADVTTDEYHRYKEDVDLLKSLNFDAYRFSISWSRIFPDGEGKVNTEGVAYYNNLIDYVIKQGLIPYVNLNHYDLPLALQKKYEGWLSPKIVGVFSDYAEFCFKTYGDRVKNWFTF 209          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: BGL38_ORYSJ (Beta-glucosidase 38 OS=Oryza sativa subsp. japonica GN=BGLU38 PE=2 SV=2)

HSP 1 Score: 177.948 bits (450), Expect = 1.359e-44
Identity = 78/134 (58.21%), Postives = 99/134 (73.88%), Query Frame = 1
Query:    4 GTRIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMT 405
            G  IWD F  +PG+  +N+T +V+VD+YHRY +DVD M  + FDAYRFSISWSRIFP G GK+N  GV YY++LI+Y+L   I PY  LYHYDLP+ L  +Y G L  R+V+DF  +ADFCFKT+G +VKNW T
Sbjct:   56 GPCIWDTFLMQPGVTPDNSTANVTVDEYHRYMDDVDNMVRVGFDAYRFSISWSRIFPSGLGKINKDGVDYYHRLIDYMLANNIIPYVVLYHYDLPQVLHDQYKGWLHPRIVRDFVRFADFCFKTYGHKVKNWFT 189          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: BGL34_ORYSJ (Beta-glucosidase 34 OS=Oryza sativa subsp. japonica GN=BGLU34 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 1.775e-44
Identity = 78/135 (57.78%), Postives = 104/135 (77.04%), Query Frame = 1
Query:    4 GTRIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            G  IWD FA   G + + +  DV+VDQYHR++ED+ +MA++  DAYRFSISWSRIFP GTG+VN  G+ +YN+LIN LL +GI PY  LYH+DLP+ALE KY G L ++++ D+A YA+ CF+ FGDRVK+W+TF
Sbjct:   63 GPTIWDKFAHTFGKIIDFSNADVAVDQYHRFEEDIQLMADMGMDAYRFSISWSRIFPNGTGEVNQAGIDHYNKLINALLAKGIEPYVTLYHWDLPQALEDKYTGWLDRQIINDYAVYAETCFQAFGDRVKHWITF 197          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: BGL25_ORYSJ (Beta-glucosidase 25 OS=Oryza sativa subsp. japonica GN=BGLU25 PE=2 SV=2)

HSP 1 Score: 176.407 bits (446), Expect = 3.955e-44
Identity = 78/135 (57.78%), Postives = 102/135 (75.56%), Query Frame = 1
Query:    4 GTRIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            G  IWD   K+PG V + +  DV+VD YHRYKEDV++M ++  DAYRFSISWSRIFP GTG+ N +G++YYN LI+ LL +GI PY  L+H+DLP+ALE +Y G L+  +++DF  YA  CFK FGDRVK+W+TF
Sbjct:   50 GPTIWDTLTKRPGRVIDFSNADVAVDHYHRYKEDVELMNDIGMDAYRFSISWSRIFPNGTGEPNEEGLSYYNSLIDALLDKGIEPYVTLFHWDLPQALEDRYGGWLNSEIIEDFVQYAFTCFKEFGDRVKHWITF 184          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: BGL41_ARATH (Putative beta-glucosidase 41 OS=Arabidopsis thaliana GN=BGLU41 PE=3 SV=2)

HSP 1 Score: 175.637 bits (444), Expect = 6.746e-44
Identity = 83/136 (61.03%), Postives = 99/136 (72.79%), Query Frame = 1
Query:    4 GTRIWDVFAK-KPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            G  IWD F K KPG + + +  D +VDQYHR+  D+D+M +L  DAYRFSISWSRIFP GTG+VN  GV YYN LI+ LL +GI PY  LYH+DLP+ALE +Y G LS+ VV DF  YA  CFK FGDRVK W+TF
Sbjct:   60 GESIWDTFTKEKPGKILDFSNADTTVDQYHRFHNDIDLMKDLRMDAYRFSISWSRIFPNGTGEVNPDGVKYYNSLIDALLAKGIKPYVTLYHWDLPQALEDRYEGWLSREVVDDFEHYAFTCFKAFGDRVKYWITF 195          
The following BLAST results are available for this feature:
BLAST of CX287917 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
BGL01_ORYSJ5.493e-6278.52Beta-glucosidase 1 OS=Oryza sativa subsp. japonica... [more]
BGL44_ARATH1.598e-6177.04Beta-glucosidase 44 OS=Arabidopsis thaliana GN=BGL... [more]
BGL26_ORYSJ2.235e-5570.37Beta-glucosidase 26 OS=Oryza sativa subsp. japonic... [more]
BGL07_ORYSJ7.191e-5471.11Beta-glucosidase 7 OS=Oryza sativa subsp. japonica... [more]
BGL43_ARATH1.148e-5170.37Beta-glucosidase 43 OS=Arabidopsis thaliana GN=BGL... [more]
BGL08_ORYSJ1.148e-5166.67Beta-glucosidase 8 OS=Oryza sativa subsp. japonica... [more]
BGL38_ORYSJ1.359e-4458.21Beta-glucosidase 38 OS=Oryza sativa subsp. japonic... [more]
BGL34_ORYSJ1.775e-4457.78Beta-glucosidase 34 OS=Oryza sativa subsp. japonic... [more]
BGL25_ORYSJ3.955e-4457.78Beta-glucosidase 25 OS=Oryza sativa subsp. japonic... [more]
BGL41_ARATH6.746e-4461.03Putative beta-glucosidase 41 OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionC01014G07SK Veg1 Citrus clementina cDNA clone C01014G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287917 ID=CX287917; Name=CX287917; organism=Citrus clementina; type=EST; length=410bp
TTCGGCACGAGGATTTGGGATGTCTTTGCTAAGAAGCCCGGAATTGTTGC
CAATAATGCCACCGGGGATGTGTCCGTGGACCAATATCACCGTTACAAAG
AGGATGTTGATATCATGGCAAATTTGAATTTTGATGCATACCGGTTCTCA
ATTTCCTGGTCCAGAATTTTCCCATATGGAACTGGGAAAGTAAATTGGAA
GGGAGTTGCATACTACAATCAGCTGATCAACTACTTGCTCAAAAGAGGTA
TTACTCCATATGCAAATCTTTATCACTATGATCTTCCTGAAGCTCTCGAG
AAGAAGTACATTGGATTGCTCAGTAAGAGAGTAGTGAAAGACTTTGCTGA
TTACGCTGACTTTTGCTTTAAGACATTTGGAGACAGAGTAAAGAATTGGA
TGACATTTAA
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