CX287927

Overview
NameCX287927
Unique NameCX287927
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length407
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX287927 vs. ExPASy Swiss-Prot
Match: B2_DAUCA (B2 protein OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 1.461e-38
Identity = 67/91 (73.63%), Postives = 82/91 (90.11%), Query Frame = 3 
Query:    6 LFLYNYTTHQLHGIFEATGFGGSNIDPTAWEDKKCKGESRFPAQVRIRVRKLCKALEEDAFRPVLHHYDGPKFRLELSVPETLDLMDLCEQ 278
            LFLYNY+THQLHG+FEA  FGG+NIDPTAWEDKK +GESRFPAQVR+  RK+C+ LEED+FRP+LHHYDGPKFRLEL++PE + L+D+ E+
Sbjct:  114 LFLYNYSTHQLHGVFEAASFGGTNIDPTAWEDKKNQGESRFPAQVRVMTRKICEPLEEDSFRPILHHYDGPKFRLELNIPEAISLLDIFEE 204
The following BLAST results are available for this feature:
BLAST of CX287927 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
B2_DAUCA1.461e-3873.63B2 protein OS=Daucus carota PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionC01014H05SK Veg1 Citrus clementina cDNA clone C01014H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287927 ID=CX287927; Name=CX287927; organism=Citrus clementina; type=EST; length=407bp
CGAGGCTTTTTCTCTACAACTATACTACTCACCAACTGCATGGAATATTT
GAGGCAACTGGTTTTGGAGGCTCCAACATTGACCCAACAGCCTGGGAGGA
CAAAAAGTGTAAAGGGGAATCAAGGTTTCCTGCTCAGGTAAGGATCCGGG
TAAGAAAACTGTGCAAGGCATTGGAAGAAGATGCTTTTAGGCCTGTCTTG
CATCACTACGATGGTCCTAAATTTCGTCTTGAGCTCTCTGTTCCTGAGAC
TCTTGATCTAATGGATCTTTGTGAACAAGCGGGCTCTGCTGCATAAGCAT
AATATTTTAGCGGAATTGGCAAATGTGGTAGGATGTGAGCTGCCTGCTTT
TCACCGATTTTCCTCAAGAGCGCAAGCTATGGTAAAAGTCTGGTTGTATG
AATCTTC
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