CX287945

Overview
NameCX287945
Unique NameCX287945
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length738
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287945 vs. ExPASy Swiss-Prot
Match: E13B_PRUPE (Glucan endo-1,3-beta-glucosidase, basic isoform OS=Prunus persica GN=GNS1 PE=3 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.308e-81
Identity = 149/215 (69.30%), Postives = 179/215 (83.26%), Query Frame = 1
Query:   16 FAQYLVPAMRNIQNAINGAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLVNLYPYFAIAGNRQ-ISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLDIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKKPGRPIETYIFAMFDENGKTGPEIERHWGLFAPTRQPRYQINFN 657
            FAQ+LVPAMRNIQ AI+ AGL  +IKVSTAI+TG LGE+FPPS GSFK +Y  +L P+IRFL  ++SPLLVNLYPYFA +GN Q I LDYALF +   VV DG+  YR+LFDA+LD VYAALEK GGGSL +VISE+GWP+A   G  T +DNART+ +NLIQHVK G+P++PGRPIETYIFAMFDEN KT PE+E+HWGLF+PT+QP+YQI+FN
Sbjct:  139 FAQFLVPAMRNIQEAISLAGLAKKIKVSTAIDTGVLGETFPPSIGSFKSEYNALLYPIIRFLVSHQSPLLVNLYPYFAYSGNTQDIRLDYALFTAPSVVVQDGNFGYRNLFDAMLDGVYAALEKAGGGSLKVVISETGWPSAA--GTATTIDNARTFISNLIQHVKEGTPRRPGRPIETYIFAMFDENRKT-PELEKHWGLFSPTKQPKYQISFN 350          
BLAST of CX287945 vs. ExPASy Swiss-Prot
Match: E13A_SOYBN (Glucan endo-1,3-beta-glucosidase OS=Glycine max PE=1 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 2.089e-79
Identity = 148/217 (68.20%), Postives = 179/217 (82.49%), Query Frame = 1
Query:   16 FAQYLVPAMRNIQNAINGAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYR-PILDPLIRFLNENRSPLLVNLYPYFAIAGN-RQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLDIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKKPGRPIETYIFAMFDENGKTGPEIERHWGLFAP-TRQPRYQINFN 657
            FAQ+LVPA+ NIQ AI+ AGLGNQ+KVSTAI+TGAL ESFPPS+GSFK DYR   LD +IRFL  N +PL+VN+Y YFA   N + ISLDYALFRS   VV DGSL YR+LFDA +DAVYAALEK GGGSL+IV+SESGWP++G  G  T++DNARTYN NL+++VK+G+PK+PG P+ETY+FAMFDEN K  PE E+ WGLF+P T+QP+Y INFN
Sbjct:  134 FAQFLVPALENIQRAISNAGLGNQVKVSTAIDTGALAESFPPSKGSFKSDYRGAYLDGVIRFLVNNNAPLMVNVYSYFAYTANPKDISLDYALFRSPSVVVQDGSLGYRNLFDASVDAVYAALEKAGGGSLNIVVSESGWPSSG--GTATSLDNARTYNTNLVRNVKQGTPKRPGAPLETYVFAMFDENQKQ-PEFEKFWGLFSPITKQPKYSINFN 347          
BLAST of CX287945 vs. ExPASy Swiss-Prot
Match: E13H_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q' OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 6.290e-76
Identity = 141/219 (64.38%), Postives = 169/219 (77.17%), Query Frame = 1
Query:    1 NSARGFAQYLVPAMRNIQNAINGAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLVNLYPYFAIAGNRQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLDIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKKPGRPIETYIFAMFDENGKTGPEIERHWGLFAPTRQPRYQINFN 657
            N    +   L+ AMRNIQ AI+GAGLGNQIKVSTAIETG   ++ PPS G FK D R  ++P+I FL  NR+PLLVNLYPYFAIA N  I L+YALF S + VV+D    YR+LFDAILDA Y+ALEK  G SL+IV+SESGWP+AG  G LT++DNARTYNNNLI HVK GSPK+P  PIETY+FA+FDE+ K  PEIE+H+GLF+   QP+YQI+FN
Sbjct:  123 NENSKYVPVLLNAMRNIQTAISGAGLGNQIKVSTAIETGLTTDTSPPSNGRFKDDVRQFIEPIINFLVTNRAPLLVNLYPYFAIANNADIKLEYALFTSSEVVVNDNGRGYRNLFDAILDATYSALEKASGSSLEIVVSESGWPSAGA-GQLTSIDNARTYNNNLISHVKGGSPKRPSGPIETYVFALFDEDQK-DPEIEKHFGLFSANMQPKYQISFN 339          
BLAST of CX287945 vs. ExPASy Swiss-Prot
Match: GUB_NICPL (Lichenase OS=Nicotiana plumbaginifolia GN=GN1 PE=2 SV=3)

HSP 1 Score: 269.626 bits (688), Expect = 1.227e-71
Identity = 131/212 (61.79%), Postives = 167/212 (78.77%), Query Frame = 1
Query:   22 QYLVPAMRNIQNAINGAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLVNLYPYFAIAGN-RQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLDIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKKPGRPIETYIFAMFDENGKTGPEIERHWGLFAPTRQPRYQINF 654
            +YL+PAMRNI+NAI+ AGL N IKVS++++   +G SFPPS+GSF+ D R  +DP+I F+    SPLLVN+YPYF+ AGN R ISL YALF +   VV DGSL YR+LFDA+ DAVYAAL + GGGS++IV+SESGWP+AG   A TN  NA TY  NLIQHVKRGSP++P + IETY+FAMFDEN K  PE+E+H+GLF+P +QP+Y ++F
Sbjct:  138 RYLLPAMRNIRNAISSAGLQNNIKVSSSVDMTLIGNSFPPSQGSFRNDVRSFIDPIIGFVRRINSPLLVNIYPYFSYAGNPRDISLPYALFTAPNVVVQDGSLGYRNLFDAMSDAVYAALSRAGGGSIEIVVSESGWPSAGAFAATTN--NAATYYKNLIQHVKRGSPRRPNKVIETYLFAMFDENNK-NPELEKHFGLFSPNKQPKYPLSF 346          
BLAST of CX287945 vs. ExPASy Swiss-Prot
Match: E133_SOLTU (Glucan endo-1,3-beta-glucosidase, basic isoform 3 (Fragment) OS=Solanum tuberosum GN=GLUB3 PE=2 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 5.157e-70
Identity = 133/226 (58.85%), Postives = 169/226 (74.78%), Query Frame = 1
Query:   25 YLVPAMRNIQNAINGAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLVNLYPYFAIAGN-RQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLDIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKKPGRPIETYIFAMFDENGKTGPEIERHWGLFAPTRQPRYQINFN*LTKLKQLHAPTGS 699
            + VPA+ NI  AI  AGLGN IKVST+++   +G S+PPS+GSF+ D R   DP++ FL + R+PLLVN+YPYF+ +GN  QISL YALF +   VV DGS  YR+LFDA+LD+VYAA+E+TGGGS+ IV+SESGWP+AG  GA    DNA TY  NLIQH K GSP+KPG PIETYIFAMFDEN K  PE+E+H+GLF+P +QP+Y +NF    ++  + A T S
Sbjct:   98 FQVPALVNIYKAIGEAGLGNDIKVSTSVDMTLIGNSYPPSQGSFRNDVRWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYALFTAPNVVVQDGSRQYRNLFDAMLDSVYAAMERTGGGSVGIVVSESGWPSAGAFGA--TQDNAATYLRNLIQHAKEGSPRKPG-PIETYIFAMFDENNK-NPELEKHFGLFSPNKQPKYNLNFGVSERVWDISAETNS 319          
BLAST of CX287945 vs. ExPASy Swiss-Prot
Match: E131_SOLTU (Glucan endo-1,3-beta-glucosidase, basic isoform 1 (Fragment) OS=Solanum tuberosum GN=GLUB1 PE=2 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 6.735e-70
Identity = 132/226 (58.41%), Postives = 169/226 (74.78%), Query Frame = 1
Query:   25 YLVPAMRNIQNAINGAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLVNLYPYFAIAGN-RQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLDIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKKPGRPIETYIFAMFDENGKTGPEIERHWGLFAPTRQPRYQINFN*LTKLKQLHAPTGS 699
            + VPA+ NI  A+  AGLGN IKVST+++   +G S+PPS+GSF+ D R   DP++ FL + R+PLLVN+YPYF+ +GN  QISL YALF +   VV DGS  YR+LFDA+LD+VYAA+E+TGGGS+ IV+SESGWP+AG  GA    DNA TY  NLIQH K GSP+KPG PIETYIFAMFDEN K  PE+E+H+GLF+P +QP+Y +NF    ++  + A T S
Sbjct:  107 FQVPALVNIYKAVGEAGLGNDIKVSTSVDMTLIGNSYPPSQGSFRNDVRWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYALFTAPNAVVQDGSRQYRNLFDAMLDSVYAAMERTGGGSVGIVVSESGWPSAGAFGA--TQDNAATYLRNLIQHAKEGSPRKPG-PIETYIFAMFDENNK-NPELEKHFGLFSPNKQPKYNLNFGVSERVWDISAETNS 328          
BLAST of CX287945 vs. ExPASy Swiss-Prot
Match: E132_SOLTU (Glucan endo-1,3-beta-glucosidase, basic isoform 2 OS=Solanum tuberosum GN=GLUB2 PE=2 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 2.559e-69
Identity = 131/226 (57.96%), Postives = 168/226 (74.34%), Query Frame = 1
Query:   25 YLVPAMRNIQNAINGAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLVNLYPYFAIAGN-RQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLDIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKKPGRPIETYIFAMFDENGKTGPEIERHWGLFAPTRQPRYQINFN*LTKLKQLHAPTGS 699
            + VPA+ NI  A+  AGLGN IKVST+++   +G S+PPS+GSF+ D R   DP++ FL + R+PLLVN+YPYF+ +GN  QISL YALF +   VV DGS  YR+LFDA+LD+VYAA+E+TGGGS+ IV+SE GWP+AG  GA    DNA TY  NLIQH K GSP+KPG PIETYIFAMFDEN K  PE+E+H+GLF+P +QP+Y +NF    ++  + A T S
Sbjct:  133 FQVPALVNIYKAVGEAGLGNDIKVSTSVDMTLIGNSYPPSQGSFRNDVRWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYALFTAPNVVVQDGSRQYRNLFDAMLDSVYAAMERTGGGSVGIVVSECGWPSAGAFGA--TQDNAATYLRNLIQHAKEGSPRKPG-PIETYIFAMFDENNK-NPELEKHFGLFSPNKQPKYNLNFGVSERVWDISAETNS 354          
BLAST of CX287945 vs. ExPASy Swiss-Prot
Match: E13B_TOBAC (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Nicotiana tabacum PE=1 SV=2)

HSP 1 Score: 260.381 bits (664), Expect = 7.447e-69
Identity = 130/211 (61.61%), Postives = 162/211 (76.78%), Query Frame = 1
Query:   25 YLVPAMRNIQNAINGAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLVNLYPYFAIAGN-RQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLDIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKKPGRPIETYIFAMFDENGKTGPEIERHWGLFAPTRQPRYQINF 654
            +L PAM NI  AI  AGLGN IKVST+++   +G S+PPS+GSF+ D R   DP++ FL + R+PLLVN+YPYF+ +GN  QISL Y+LF +   VV DGS  YR+LFDA+LD+VYAALE++GG S+ IV+SESGWP+AG  GA    DNA TY  NLIQH K GSP+KPG PIETYIFAMFDEN K  PE+E+H+GLF+P +QP+Y INF
Sbjct:  142 FLTPAMVNIYKAIGEAGLGNNIKVSTSVDMTLIGNSYPPSQGSFRNDARWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYSLFTAPNVVVQDGSRQYRNLFDAMLDSVYAALERSGGASVGIVVSESGWPSAGAFGA--TYDNAATYLRNLIQHAKEGSPRKPG-PIETYIFAMFDENNK-NPELEKHFGLFSPNKQPKYNINF 348          
BLAST of CX287945 vs. ExPASy Swiss-Prot
Match: E13B_SOLLC (Glucan endo-1,3-beta-glucosidase B OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 9.726e-69
Identity = 128/213 (60.09%), Postives = 165/213 (77.46%), Query Frame = 1
Query:   19 AQYLVPAMRNIQNAINGAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLVNLYPYFAIAGN-RQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLDIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKKPGRPIETYIFAMFDENGKTGPEIERHWGLFAPTRQPRYQINF 654
            A + VPA+ NI  AI  AGLGN IKVST+++   +G S+PPS+GSF+ D R   DP++ FL + R+PLLVN+YPYF+ +GN  QISL YALF +   VV DGS  YR+LFDA+LD+VYAA+++TGGGS+ IV+SESGWP+AG  GA    +NA+TY  NLIQH K GSP+KPG PIETYIFAMFDEN K  PE+E+H+G+F+P +QP+Y +NF
Sbjct:  131 APFQVPALVNIYKAIGEAGLGNDIKVSTSVDMTLIGNSYPPSQGSFRNDVRWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYALFTAPNVVVQDGSRQYRNLFDAMLDSVYAAMDRTGGGSVGIVVSESGWPSAGAFGA--THENAQTYLRNLIQHAKEGSPRKPG-PIETYIFAMFDENNK-NPELEKHFGMFSPNKQPKYNLNF 339          
BLAST of CX287945 vs. ExPASy Swiss-Prot
Match: E13B_NICPL (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Nicotiana plumbaginifolia GN=GN2 PE=3 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 9.726e-69
Identity = 129/211 (61.14%), Postives = 163/211 (77.25%), Query Frame = 1
Query:   25 YLVPAMRNIQNAINGAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLVNLYPYFAIAGN-RQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLDIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKKPGRPIETYIFAMFDENGKTGPEIERHWGLFAPTRQPRYQINF 654
            +L PAM NI  AI  AGLGN IKVST+++   +G S+PPS+GSF+ D R  +DP++ FL + R+PLLVN+YPYF+ +GN  QISL Y+LF +   VV DGS  YR+LFDA+LD+VYAALE++GG S+ IV+SESGWP+AG  GA    DNA TY  NLIQH K GSP+KP RPIETYIFAMFDEN K  PE+E+H+GLF+P +QP+Y +NF
Sbjct:  141 FLTPAMVNIYKAIGEAGLGNNIKVSTSVDMTLIGNSYPPSQGSFRNDARWFVDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYSLFTAPNVVVQDGSRQYRNLFDAMLDSVYAALERSGGASVGIVVSESGWPSAGAFGA--TYDNAATYLKNLIQHAKEGSPRKP-RPIETYIFAMFDENNK-NPELEKHFGLFSPNKQPKYNLNF 347          
The following BLAST results are available for this feature:
BLAST of CX287945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
E13B_PRUPE1.308e-8169.30Glucan endo-1,3-beta-glucosidase, basic isoform OS... [more]
E13A_SOYBN2.089e-7968.20Glucan endo-1,3-beta-glucosidase OS=Glycine max PE... [more]
E13H_TOBAC6.290e-7664.38Glucan endo-1,3-beta-glucosidase, acidic isoform P... [more]
GUB_NICPL1.227e-7161.79Lichenase OS=Nicotiana plumbaginifolia GN=GN1 PE=2... [more]
E133_SOLTU5.157e-7058.85Glucan endo-1,3-beta-glucosidase, basic isoform 3 ... [more]
E131_SOLTU6.735e-7058.41Glucan endo-1,3-beta-glucosidase, basic isoform 1 ... [more]
E132_SOLTU2.559e-6957.96Glucan endo-1,3-beta-glucosidase, basic isoform 2 ... [more]
E13B_TOBAC7.447e-6961.61Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E13B_SOLLC9.726e-6960.09Glucan endo-1,3-beta-glucosidase B OS=Solanum lyco... [more]
E13B_NICPL9.726e-6961.14Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]

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Properties
Property NameValue
Genbank descriptionC01015B03SK Veg1 Citrus clementina cDNA clone C01015B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287945 ID=CX287945; Name=CX287945; organism=Citrus clementina; type=EST; length=738bp
AATTCGGCACGAGGCTTCGCTCAGTACCTTGTTCCCGCCATGAGAAACAT
ACAAAACGCCATCAACGGAGCCGGCCTTGGAAACCAAATCAAGGTTTCCA
CTGCCATCGAAACTGGAGCTCTTGGCGAATCTTTCCCTCCGTCAAGAGGC
TCATTTAAACAAGATTACAGACCCATTCTTGATCCCCTCATTCGCTTCCT
CAACGAAAACAGATCCCCCTTGCTTGTCAACCTGTACCCTTACTTCGCAA
TTGCTGGTAACCGCCAAATATCTCTGGATTATGCACTTTTTAGGTCACAA
CAGACGGTCGTTTCCGACGGATCGTTAAGTTACCGAAGTCTTTTTGACGC
CATCTTGGATGCTGTTTACGCCGCGCTGGAGAAAACCGGCGGGGGGTCGC
TGGACATCGTGATATCAGAGAGTGGGTGGCCGACGGCTGGTGGTGACGGA
GCGTTGACGAATGTTGATAATGCAAGGACTTATAATAATAACTTGATACA
ACATGTGAAGCGAGGGTCACCAAAGAAGCCTGGAAGGCCTATTGAGACTT
ACATATTTGCTATGTTTGATGAGAATGGCAAAACGGGACCTGAGATTGAG
AGGCATTGGGGACTTTTTGCTCCAACTAGGCAGCCTAGATACCAGATTAA
TTTTAATTAATTAACTAAGCTAAAGCAGCTGCATGCACCAACAGGATCCC
GACGGATATTTATACTGGGATAAATTCTACCATATGTA
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