CX287947

Overview
NameCX287947
Unique NameCX287947
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length729
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15452 contig Ccv1_Contig15452:74..802. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX287947 vs. ExPASy Swiss-Prot
Match: CATA_AVIMR (Catalase OS=Avicennia marina PE=2 SV=1)

HSP 1 Score: 425.246 bits (1092), Expect = 1.695e-118
Identity = 194/237 (81.86%), Postives = 216/237 (91.14%), Query Frame = 3
Query:   18 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWEPTCGVKVLID 728
            MDPYK  PS++ N P  TTN G PV+NDN SLTVG+RGPVLLEDY L++KLAHF RERIPERVVHARGA+AKGFFE THD+SHLTCAD  RAPGVQTP+IVRFSTVIHERGSPETLRDPRGFAVKFYTREGN+D++GN+ PVFFIRDAIKFPDVIHAFKPNPKSHIQE WRILDFCSH PESL TF+WF+DDVGIPQDYRHMEGFGV ++TL+NK GKV+YVKFHW+PTCGVK L++
Sbjct:    1 MDPYKYCPSSSFNTPHTTTNGGHPVYNDNSSLTVGTRGPVLLEDYQLIDKLAHFTRERIPERVVHARGATAKGFFEVTHDVSHLTCADFLRAPGVQTPLIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDIVGNNFPVFFIRDAIKFPDVIHAFKPNPKSHIQESWRILDFCSHFPESLLTFAWFYDDVGIPQDYRHMEGFGVHSYTLINKAGKVNYVKFHWKPTCGVKCLME 237          
BLAST of CX287947 vs. ExPASy Swiss-Prot
Match: CATA2_RICCO (Catalase isozyme 2 OS=Ricinus communis GN=CAT2 PE=2 SV=1)

HSP 1 Score: 419.468 bits (1077), Expect = 9.301e-117
Identity = 191/237 (80.59%), Postives = 213/237 (89.87%), Query Frame = 3
Query:   18 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWEPTCGVKVLID 728
            MDPYK  PS++++ PF TTNAG PV N+N S+TVG RGP+LLEDYH++EKLA+F RERIPERVVHARG SAKGFFE THD++ LTCAD  RAPGVQTPVIVRFSTVIHERGSPETLRDPRGFA KFYTREGN+D++GN+ PVFFIRD IKFPDV+HAFKPNPKSHIQEYWRI DFCSH PESLSTF+WFFDDVGIPQDYRHMEGFGV T+ L+NK GKV YVKFHW+PTCGVK L+D
Sbjct:    1 MDPYKFRPSSSNDTPFWTTNAGDPVSNNNSSMTVGPRGPILLEDYHMIEKLANFTRERIPERVVHARGMSAKGFFEVTHDVTDLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFATKFYTREGNFDIVGNNFPVFFIRDGIKFPDVVHAFKPNPKSHIQEYWRIFDFCSHHPESLSTFAWFFDDVGIPQDYRHMEGFGVHTYCLINKAGKVTYVKFHWKPTCGVKCLMD 237          
BLAST of CX287947 vs. ExPASy Swiss-Prot
Match: CATA_IPOBA (Catalase OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 415.231 bits (1066), Expect = 1.754e-115
Identity = 188/237 (79.32%), Postives = 212/237 (89.45%), Query Frame = 3
Query:   18 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWEPTCGVKVLID 728
            MDP K  PS++ N PF TTN+GAPVWN+  +LTVGSRGP+LLEDYHLVEK+ +F RERIPERVVHARGASAKGFFE THDI+HLTCAD  RAPGVQTP+IVRFSTVIHERGSPET+RDPRGFAVK YTR GNWDL+GN+ PVFFIRD  +FPDVIHAFKPNPKSHIQE WRILD+ SHLPESL+TF+WF+DDVGIP DYRHMEGFGV TFT++NK GK +YVKFHW+PTCGVK L++
Sbjct:    1 MDPSKYRPSSSFNTPFCTTNSGAPVWNNTCALTVGSRGPILLEDYHLVEKIQNFTRERIPERVVHARGASAKGFFEVTHDITHLTCADFLRAPGVQTPLIVRFSTVIHERGSPETIRDPRGFAVKMYTRGGNWDLVGNNFPVFFIRDGTQFPDVIHAFKPNPKSHIQENWRILDYLSHLPESLNTFAWFYDDVGIPTDYRHMEGFGVHTFTMINKEGKANYVKFHWKPTCGVKCLLE 237          
BLAST of CX287947 vs. ExPASy Swiss-Prot
Match: CATA3_MAIZE (Catalase isozyme 3 OS=Zea mays GN=CAT3 PE=2 SV=2)

HSP 1 Score: 415.231 bits (1066), Expect = 1.754e-115
Identity = 186/236 (78.81%), Postives = 209/236 (88.56%), Query Frame = 3
Query:   18 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWEPTCGVKVLI 725
            MDP K  PS++H+    TTNAGAPVWNDN +LTVG RGP+LLEDYHL+EK+AHFARERIPERVVHARGASAKGFFECTHD++ LTCAD  RAPGV+TPVIVRFSTVIHERGSPET+RDPRGFAVKFYTREGNWDLLGN+ PVFFIRD IKFPDVIHAFKPNP+SH+QEYWR+ DF SHLPESL TF + FDDVG+P DYRHMEGFGV T+T V+  GK  YVKFHW+PTCGV+ ++
Sbjct:    3 MDPTKFRPSSSHDTTVTTTNAGAPVWNDNEALTVGPRGPILLEDYHLIEKVAHFARERIPERVVHARGASAKGFFECTHDVTSLTCADFLRAPGVRTPVIVRFSTVIHERGSPETIRDPRGFAVKFYTREGNWDLLGNNFPVFFIRDGIKFPDVIHAFKPNPRSHVQEYWRVFDFLSHLPESLHTFFFLFDDVGVPSDYRHMEGFGVNTYTFVSAAGKAQYVKFHWKPTCGVRCIL 238          
BLAST of CX287947 vs. ExPASy Swiss-Prot
Match: CATA1_RICCO (Catalase isozyme 1 OS=Ricinus communis GN=CAT1 PE=2 SV=2)

HSP 1 Score: 413.305 bits (1061), Expect = 6.665e-115
Identity = 189/237 (79.75%), Postives = 212/237 (89.45%), Query Frame = 3
Query:   18 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWEPTCGVKVLID 728
            MDPY+  PS+  N PF TTN+GAPVWN+N SLTVGSRGP+LLEDYHL+EKLA+F RERIPERVVHARGASAKGFFE THD+SHLTCAD  RAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGN+DL+GN+ PVFFIRD +KFPDV+HAFKPNPKSH+QE WRI DF SH+PESL   ++  DD+GIPQDYRHMEG GV T+TL+NK GKVHYVKFHW+PTCGVK L++
Sbjct:    1 MDPYRNRPSSGFNTPFWTTNSGAPVWNNNSSLTVGSRGPILLEDYHLIEKLANFDRERIPERVVHARGASAKGFFEVTHDVSHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFIRDGMKFPDVVHAFKPNPKSHLQENWRIFDFLSHVPESLHMLTFLLDDLGIPQDYRHMEGSGVNTYTLINKAGKVHYVKFHWKPTCGVKCLLE 237          
BLAST of CX287947 vs. ExPASy Swiss-Prot
Match: CATA3_NICPL (Catalase isozyme 3 OS=Nicotiana plumbaginifolia GN=CAT3 PE=2 SV=1)

HSP 1 Score: 412.92 bits (1060), Expect = 8.705e-115
Identity = 188/237 (79.32%), Postives = 213/237 (89.87%), Query Frame = 3
Query:   18 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWEPTCGVKVLID 728
            MDPYK  PS+ +N+PF TTN+GAPVWN+N S+TVG+RGP+LLEDYHLVEKLA+F RERIPERVVHARGASAKGFFE THDI+HLTCAD  RAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGN+DL+GN+ PVFF+RD +KFPD++HA KPNPKSHIQE WRILDF SH PESL  FS+ FDD+G+PQDYRHMEG GV T+ L+NK GK HYVKFHW+PTCGVK L++
Sbjct:    1 MDPYKYRPSSANNSPFWTTNSGAPVWNNNSSMTVGTRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDITHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRILDFFSHHPESLHMFSFLFDDLGVPQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLE 237          
BLAST of CX287947 vs. ExPASy Swiss-Prot
Match: CATA3_SOYBN (Catalase-3 OS=Glycine max GN=CAT3 PE=2 SV=1)

HSP 1 Score: 410.994 bits (1055), Expect = 3.308e-114
Identity = 190/237 (80.17%), Postives = 211/237 (89.03%), Query Frame = 3
Query:   18 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWEPTCGVKVLID 728
            MDPYK  PS+  N+PF TTN+GAP+WN+N SLTVGSRGP+LLEDYHLVEKLA+F RERIPERVVHARGASAKGFFE THDISHLTCAD  RAPGVQTP+IVRFSTVIHERGSPETLRDPRGFAVKFYTREGN+DL+GN+ PVFF+RD +KFPD++HA KPNPKSHIQE WRILDF SH PESL  FS+ FDDVGIPQDYRHM+GFGV T+TL+NK GK  YVKFHW+ TCG K L+D
Sbjct:    1 MDPYKNRPSSAFNSPFWTTNSGAPIWNNNSSLTVGSRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPLIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGLKFPDMVHALKPNPKSHIQENWRILDFFSHHPESLHMFSFLFDDVGIPQDYRHMDGFGVNTYTLINKAGKAVYVKFHWKTTCGEKCLLD 237          
BLAST of CX287947 vs. ExPASy Swiss-Prot
Match: CATA2_ARATH (Catalase-2 OS=Arabidopsis thaliana GN=CAT2 PE=1 SV=3)

HSP 1 Score: 410.223 bits (1053), Expect = 5.643e-114
Identity = 187/237 (78.90%), Postives = 214/237 (90.30%), Query Frame = 3
Query:   18 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWEPTCGVKVLID 728
            MDPYK  P++++N+PF TTN+GAPVWN+N S+TVG RGP+LLEDYHLVEKLA+F RERIPERVVHARGASAKGFFE THDIS+LTCAD  RAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGN+DL+GN+ PVFFIRD +KFPD++HA KPNPKSHIQE WRILDF SH PESL+ F++ FDD+GIPQDYRHM+G GV T+ L+NK GK HYVKFHW+PTCGVK L++
Sbjct:    1 MDPYKYRPASSYNSPFFTTNSGAPVWNNNSSMTVGPRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFIRDGMKFPDMVHALKPNPKSHIQENWRILDFFSHHPESLNMFTFLFDDIGIPQDYRHMDGSGVNTYMLINKAGKAHYVKFHWKPTCGVKSLLE 237          
BLAST of CX287947 vs. ExPASy Swiss-Prot
Match: CATA2_HORVU (Catalase isozyme 2 OS=Hordeum vulgare GN=CAT2 PE=2 SV=1)

HSP 1 Score: 409.453 bits (1051), Expect = 9.625e-114
Identity = 186/237 (78.48%), Postives = 206/237 (86.92%), Query Frame = 3
Query:   18 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWEPTCGVKVLID 728
            MDP K  PS++ +    TTNAG PVWNDN +LTVG RGP+LLEDYHL+EK+AHFARERIPERVVHARGASAKGFFECTHD++ LTCAD  RAPG +TPVIVRFSTVIHERGSPET+RDPRGFAVKFYTREGNWDLLGN+ PVFFIRD IKFPDVIHAFKPNPKSH+QEYWR+ DF SH PESL TF + FDDVGIP DYRHM+GFGV T+T V++ GK HYVKFHW PTCGV  L+D
Sbjct:    1 MDPCKFRPSSSFDTKTTTTNAGQPVWNDNEALTVGPRGPILLEDYHLLEKIAHFARERIPERVVHARGASAKGFFECTHDVTGLTCADFLRAPGARTPVIVRFSTVIHERGSPETIRDPRGFAVKFYTREGNWDLLGNNFPVFFIRDGIKFPDVIHAFKPNPKSHVQEYWRVFDFLSHHPESLHTFFFLFDDVGIPTDYRHMDGFGVNTYTFVSRAGKSHYVKFHWRPTCGVSCLMD 237          
BLAST of CX287947 vs. ExPASy Swiss-Prot
Match: CATA1_GOSHI (Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 PE=2 SV=2)

HSP 1 Score: 409.453 bits (1051), Expect = 9.625e-114
Identity = 190/237 (80.17%), Postives = 210/237 (88.61%), Query Frame = 3
Query:   18 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWEPTCGVKVLID 728
            MDPYK  PS+  N+PF TTN+GAPVWN+N SLTVG RG  LLEDYHLVEKLA+F RERIPERVVHARGASAKGFFE THDISHLTCAD  RAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGN+DL+GN+ PVFFIRD +KFPD++HA KPNPKSHIQE WRILDF SH PESL  F++ FDD+G+PQDYRHMEG GV T+TL+NK GK HYVKFHW+PTCGVK L++
Sbjct:    1 MDPYKHRPSSAFNSPFWTTNSGAPVWNNNSSLTVGPRGQYLLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFIRDGMKFPDMVHALKPNPKSHIQENWRILDFFSHHPESLHMFTFLFDDLGVPQDYRHMEGSGVNTYTLINKAGKAHYVKFHWKPTCGVKCLLE 237          
The following BLAST results are available for this feature:
BLAST of CX287947 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CATA_AVIMR1.695e-11881.86Catalase OS=Avicennia marina PE=2 SV=1[more]
CATA2_RICCO9.301e-11780.59Catalase isozyme 2 OS=Ricinus communis GN=CAT2 PE=... [more]
CATA_IPOBA1.754e-11579.32Catalase OS=Ipomoea batatas PE=2 SV=1[more]
CATA3_MAIZE1.754e-11578.81Catalase isozyme 3 OS=Zea mays GN=CAT3 PE=2 SV=2[more]
CATA1_RICCO6.665e-11579.75Catalase isozyme 1 OS=Ricinus communis GN=CAT1 PE=... [more]
CATA3_NICPL8.705e-11579.32Catalase isozyme 3 OS=Nicotiana plumbaginifolia GN... [more]
CATA3_SOYBN3.308e-11480.17Catalase-3 OS=Glycine max GN=CAT3 PE=2 SV=1[more]
CATA2_ARATH5.643e-11478.90Catalase-2 OS=Arabidopsis thaliana GN=CAT2 PE=1 SV... [more]
CATA2_HORVU9.625e-11478.48Catalase isozyme 2 OS=Hordeum vulgare GN=CAT2 PE=2... [more]
CATA1_GOSHI9.625e-11480.17Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 P... [more]

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Properties
Property NameValue
Genbank descriptionC01015B05SK Veg1 Citrus clementina cDNA clone C01015B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287947 ID=CX287947; Name=CX287947; organism=Citrus clementina; type=EST; length=729bp
AATTCGGCACGAGGGCCATGGATCCCTACAAATTGCTTCCGTCAACTACT
CACAATGCCCCCTTTATGACTACAAATGCCGGCGCTCCTGTCTGGAACGA
CAATCACTCCTTGACTGTTGGAAGTAGAGGTCCTGTCCTTCTTGAGGATT
ATCATCTGGTGGAGAAACTAGCTCATTTTGCCAGGGAGAGGATTCCAGAA
CGTGTCGTCCATGCTAGGGGAGCCAGTGCTAAGGGTTTCTTTGAGTGCAC
CCATGATATTTCTCACCTTACTTGTGCTGATCTTTTTCGAGCTCCAGGGG
TTCAGACACCTGTCATTGTTCGCTTCTCCACTGTTATCCATGAGCGGGGC
AGCCCTGAGACACTCAGGGATCCTCGAGGATTTGCAGTCAAGTTTTACAC
CAGAGAGGGTAATTGGGATCTTCTGGGTAACAGTATCCCTGTTTTTTTCA
TCCGTGATGCAATCAAATTCCCAGATGTGATCCATGCTTTTAAACCTAAT
CCAAAGTCTCACATCCAAGAGTACTGGAGGATCCTCGACTTCTGCTCCCA
CCTTCCTGAAAGCTTGTCCACATTTTCCTGGTTCTTTGATGATGTGGGTA
TTCCACAAGATTACAGGCACATGGAAGGCTTCGGTGTTCAAACTTTTACA
CTGGTCAATAAGAATGGGAAAGTGCACTATGTGAAATTCCACTGGGAACC
AACTTGTGGAGTTAAAGTGTTGATAGATG
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