CX287959
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287959 vs. ExPASy Swiss-Prot
Match: RH8_ARATH (DEAD-box ATP-dependent RNA helicase 8 OS=Arabidopsis thaliana GN=RH8 PE=2 SV=1) HSP 1 Score: 388.652 bits (997), Expect = 1.813e-107 Identity = 186/194 (95.88%), Postives = 192/194 (98.97%), Query Frame = 2 Query: 2 ATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIYCR 583 ATFPVTVKDFKD++L PYVINLMDELTLKGITQ+YAFVEERQK+HCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKN+ETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIYC+ Sbjct: 312 ATFPVTVKDFKDRFLTNPYVINLMDELTLKGITQFYAFVEERQKIHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIYCQ 505
BLAST of CX287959 vs. ExPASy Swiss-Prot
Match: RH8_ORYSJ (DEAD-box ATP-dependent RNA helicase 8 OS=Oryza sativa subsp. japonica GN=Os02g0641800 PE=2 SV=2) HSP 1 Score: 384.415 bits (986), Expect = 3.419e-106 Identity = 186/194 (95.88%), Postives = 190/194 (97.94%), Query Frame = 2 Query: 2 ATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIYCR 583 ATFPVTVK+FKDKYL KPYVINLMDELTLKGITQ+YAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPK +ETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIK IPP IDQAIYC+ Sbjct: 315 ATFPVTVKEFKDKYLPKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKPIPPQIDQAIYCQ 508
BLAST of CX287959 vs. ExPASy Swiss-Prot
Match: RH6_ORYSJ (DEAD-box ATP-dependent RNA helicase 6 OS=Oryza sativa subsp. japonica GN=Os04g0533000 PE=2 SV=1) HSP 1 Score: 383.259 bits (983), Expect = 7.617e-106 Identity = 185/194 (95.36%), Postives = 191/194 (98.45%), Query Frame = 2 Query: 2 ATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIYCR 583 ATFPVTVK+FKDKYL KPYVINLMDELTLKGITQ+YAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPK++ETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIK IPP ID+AIYC+ Sbjct: 305 ATFPVTVKEFKDKYLPKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKSAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKPIPPQIDRAIYCQ 498
BLAST of CX287959 vs. ExPASy Swiss-Prot
Match: RH12_ORYSJ (DEAD-box ATP-dependent RNA helicase 12 OS=Oryza sativa subsp. japonica GN=Os10g0503700 PE=2 SV=2) HSP 1 Score: 382.874 bits (982), Expect = 9.949e-106 Identity = 185/194 (95.36%), Postives = 189/194 (97.42%), Query Frame = 2 Query: 2 ATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIYCR 583 ATFPVTVKDFK+KYL +PYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPK SETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIK IPP ID A+YC+ Sbjct: 328 ATFPVTVKDFKEKYLPRPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKTSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKTIPPQIDLAVYCQ 521
BLAST of CX287959 vs. ExPASy Swiss-Prot
Match: RH6_ARATH (DEAD-box ATP-dependent RNA helicase 6 OS=Arabidopsis thaliana GN=RH6 PE=2 SV=2) HSP 1 Score: 365.155 bits (936), Expect = 2.147e-100 Identity = 173/194 (89.18%), Postives = 186/194 (95.88%), Query Frame = 2 Query: 2 ATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIYCR 583 ATFPVTVK FKD+YL+KPY+INLMD+LTL G+TQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKM+QDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFP+ SE+YLHRVGRSGRFGHLGLAVNL+TYEDRF +Y+ EQELGTEIK IP ID+AIYC+ Sbjct: 335 ATFPVTVKSFKDRYLKKPYIINLMDQLTLMGVTQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMYQTEQELGTEIKPIPSLIDKAIYCQ 528
BLAST of CX287959 vs. ExPASy Swiss-Prot
Match: RH12_ARATH (DEAD-box ATP-dependent RNA helicase 12 OS=Arabidopsis thaliana GN=RH12 PE=2 SV=1) HSP 1 Score: 364.385 bits (934), Expect = 3.662e-100 Identity = 173/194 (89.18%), Postives = 187/194 (96.39%), Query Frame = 2 Query: 2 ATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIYCR 583 ATFPVTVK FKD++L+KPYVINLMD+LTL G+TQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKM+QDHRNRVFH+FRNGACRNLVCTDLFTRGIDIQAVNVVINFDFP+ SE+YLHRVGRSGRFGHLGLAVNL+TYEDRF +Y+ EQELGTEIK IP +IDQAIYC+ Sbjct: 305 ATFPVTVKAFKDRHLRKPYVINLMDQLTLMGVTQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMYQTEQELGTEIKPIPSNIDQAIYCQ 498
BLAST of CX287959 vs. ExPASy Swiss-Prot
Match: DDX6_DICDI (Probable ATP-dependent RNA helicase ddx6 OS=Dictyostelium discoideum GN=ddx6 PE=3 SV=1) HSP 1 Score: 348.591 bits (893), Expect = 2.079e-95 Identity = 166/192 (86.46%), Postives = 183/192 (95.31%), Query Frame = 2 Query: 2 ATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIY 577 ATFPVTVK FK+ YLQ+ + INLM+ELTLKG+TQYYAFVEERQK+HCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCF+IHAKM+Q HRNRVFHDFRNGACRNLV +DLFTRGIDIQ VNVVINFDFPK+SETYLHR+GRSGRFGHLGLA+NLITYEDRF+LY+IEQELGTEIK IPP ID+++Y Sbjct: 230 ATFPVTVKSFKEHYLQQAFEINLMEELTLKGVTQYYAFVEERQKIHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFFIHAKMVQAHRNRVFHDFRNGACRNLVSSDLFTRGIDIQDVNVVINFDFPKHSETYLHRIGRSGRFGHLGLAINLITYEDRFSLYKIEQELGTEIKPIPPVIDKSLY 421
BLAST of CX287959 vs. ExPASy Swiss-Prot
Match: DHH1_ASPNC (ATP-dependent RNA helicase dhh1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=dhh1 PE=3 SV=1) HSP 1 Score: 344.739 bits (883), Expect = 3.002e-94 Identity = 162/192 (84.38%), Postives = 179/192 (93.23%), Query Frame = 2 Query: 2 ATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIY 577 ATFP+ VK FKDK+++ PY INLMDELTL+GITQYYAFVEE+QKVHCLNTLFSKLQINQSIIFCNS NRVELLAKKITELGYSCFY HA+MLQ HRNRVFHDFRNG CRNLVC+DL TRGIDIQAVNVVINFDFPKN+ETYLHR+GRSGRFGHLGLA+NLI +EDRFNLY+IEQELGTEI+ IP +ID+ +Y Sbjct: 228 ATFPLIVKSFKDKHMRNPYEINLMDELTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMLQQHRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLINWEDRFNLYKIEQELGTEIQPIPQNIDKKLY 419
BLAST of CX287959 vs. ExPASy Swiss-Prot
Match: DHH1_ASPCL (ATP-dependent RNA helicase dhh1 OS=Aspergillus clavatus GN=dhh1 PE=3 SV=1) HSP 1 Score: 344.739 bits (883), Expect = 3.002e-94 Identity = 162/192 (84.38%), Postives = 179/192 (93.23%), Query Frame = 2 Query: 2 ATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIY 577 ATFP+ VK FKDK+++ PY INLMDELTL+GITQYYAFVEE+QKVHCLNTLFSKLQINQSIIFCNS NRVELLAKKITELGYSCFY HA+MLQ HRNRVFHDFRNG CRNLVC+DL TRGIDIQAVNVVINFDFPKN+ETYLHR+GRSGRFGHLGLA+NLI +EDRFNLY+IEQELGTEI+ IP +ID+ +Y Sbjct: 228 ATFPLIVKSFKDKHMRNPYEINLMDELTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMLQQHRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLINWEDRFNLYKIEQELGTEIQPIPQNIDKKLY 419
BLAST of CX287959 vs. ExPASy Swiss-Prot
Match: DHH1_NEOFI (ATP-dependent RNA helicase dhh1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dhh1 PE=3 SV=1) HSP 1 Score: 343.584 bits (880), Expect = 6.689e-94 Identity = 161/192 (83.85%), Postives = 179/192 (93.23%), Query Frame = 2 Query: 2 ATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIY 577 ATFP+ VK FKDK+++ PY INLMDELTL+GITQYYAFVEE+QKVHCLNTLFSKLQINQSIIFCNS NRVELLAKKITELGYSCFY HA+MLQ HRNRVFHDFRNG CRNLVC+DL TRGIDIQAVNVVINFDFPKN+ETYLHR+GRSGRFGHLGLA+NLI ++DRFNLY+IEQELGTEI+ IP +ID+ +Y Sbjct: 228 ATFPLIVKSFKDKHMRNPYEINLMDELTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMLQQHRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLINWDDRFNLYKIEQELGTEIQPIPQNIDKKLY 419 The following BLAST results are available for this feature:
BLAST of CX287959 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287959 ID=CX287959; Name=CX287959; organism=Citrus clementina; type=EST; length=740bpback to top |