CX287963

Overview
NameCX287963
Unique NameCX287963
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig87 contig Ccv1_Contig87:1..721. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX287963 vs. ExPASy Swiss-Prot
Match: MAOX_VITVI (NADP-dependent malic enzyme OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 380.178 bits (975), Expect = 6.155e-105
Identity = 191/235 (81.28%), Postives = 204/235 (86.81%), Query Frame = 1
Query:   16 IGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY 720
            IGL+QRRATG+EY+E L EFMS VKQNYGEKVLIQFEDFANHNAF+LLAKYGTTHL FNDDIQ                   TLA+H+FLFLGAGEAGTGIAELIALE+SKQTK P+EETRKKI LVDSKGLIV SRKDSLQ FKKPWAHEHEPV +LLDAVKVIKPT+LIGSSGVG+ FTKEVIEAMAS NEKPLILALSNPTSQSECTAEEAYTW++GRAIFASGSPFDP EY
Sbjct:  246 IGLKQRRATGKEYSEFLQEFMSPVKQNYGEKVLIQFEDFANHNAFDLLAKYGTTHLAFNDDIQGTASVVLAGIVSALRLLGGTLADHKFLFLGAGEAGTGIAELIALEMSKQTKCPIEETRKKIWLVDSKGLIVGSRKDSLQQFKKPWAHEHEPVKDLLDAVKVIKPTVLIGSSGVGKAFTKEVIEAMASCNEKPLILALSNPTSQSECTAEEAYTWTQGRAIFASGSPFDPVEY 480          
BLAST of CX287963 vs. ExPASy Swiss-Prot
Match: MAOX_POPTR (NADP-dependent malic enzyme OS=Populus trichocarpa PE=2 SV=3)

HSP 1 Score: 375.941 bits (964), Expect = 1.161e-103
Identity = 187/235 (79.57%), Postives = 205/235 (87.23%), Query Frame = 1
Query:   16 IGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY 720
            IGLRQRRATGQEY+ELL EFM+AVKQNYGEKVLIQFEDFANHNAF+LLAKYGTTHLVFNDDIQ                   +LA+H FLFLGAGEAGTGIAELIALE+S+++K P+EETRKKI L DSKGLIVSSRK+SLQHFKKPWAHEHEPV  LL+ VK IKP +LIG+SGVG+TFTKEVIEAMASFNEKPLILALSNPTSQSECTA+EAYTW+KG+AIFASGSPFDP EY
Sbjct:  246 IGLRQRRATGQEYSELLHEFMTAVKQNYGEKVLIQFEDFANHNAFDLLAKYGTTHLVFNDDIQGTAAVVLAGLISALKLLGGSLADHTFLFLGAGEAGTGIAELIALEMSRRSKTPLEETRKKIWLTDSKGLIVSSRKESLQHFKKPWAHEHEPVKGLLEVVKAIKPIVLIGTSGVGKTFTKEVIEAMASFNEKPLILALSNPTSQSECTAQEAYTWTKGKAIFASGSPFDPVEY 480          
BLAST of CX287963 vs. ExPASy Swiss-Prot
Match: MAOX_PHAVU (NADP-dependent malic enzyme OS=Phaseolus vulgaris GN=ME1 PE=2 SV=1)

HSP 1 Score: 374.015 bits (959), Expect = 4.411e-103
Identity = 188/235 (80.00%), Postives = 200/235 (85.11%), Query Frame = 1
Query:   16 IGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY 720
            IGLRQRRATGQEYA  LDEFM AVKQNYGEKVL+QFEDFANHNAF+LL KY ++HLVFNDDIQ                   TLA+H FLFLGAGEAGTGIAELIA+E+SKQTKAPVEETRKKI LVDSKGLIVSSR +SLQ FKKPWAHEHEPV  LL+AVK IKPT+LIGSSG G+TFTKEV+E MAS NEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDP EY
Sbjct:  244 IGLRQRRATGQEYATFLDEFMRAVKQNYGEKVLVQFEDFANHNAFDLLEKYSSSHLVFNDDIQGTASVVLAGLLASLKLVGGTLADHTFLFLGAGEAGTGIAELIAVEVSKQTKAPVEETRKKIWLVDSKGLIVSSRLESLQQFKKPWAHEHEPVKGLLEAVKAIKPTVLIGSSGAGKTFTKEVVETMASLNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPVEY 478          
BLAST of CX287963 vs. ExPASy Swiss-Prot
Match: MAOC_FLAPR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria pringlei GN=MODA PE=2 SV=1)

HSP 1 Score: 372.859 bits (956), Expect = 9.827e-103
Identity = 186/235 (79.15%), Postives = 203/235 (86.38%), Query Frame = 1
Query:   16 IGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY 720
            IGLRQRRA+G+EYAEL++EFMSAVKQNYGEKVLIQFEDFANHNAF+LL KY TTHLVFNDDIQ                   +LA+H+FLFLGAGEAGTGIAELIALEISKQT AP+EETRKKI LVDSKGLIV SR DSLQHFKKPWAH+HEPVN  LDAVK IKPT+LIGSSG G+TFTKEV+EAM+SFNEKP+ILALSNPTSQSECTAE+AYTWS+GR IFASGSPF P EY
Sbjct:  302 IGLRQRRASGKEYAELMNEFMSAVKQNYGEKVLIQFEDFANHNAFDLLEKYRTTHLVFNDDIQGTASVVLAGLISALKLVGGSLADHKFLFLGAGEAGTGIAELIALEISKQTNAPLEETRKKIWLVDSKGLIVRSRLDSLQHFKKPWAHDHEPVNKFLDAVKAIKPTVLIGSSGAGQTFTKEVVEAMSSFNEKPIILALSNPTSQSECTAEQAYTWSEGRTIFASGSPFAPVEY 536          
BLAST of CX287963 vs. ExPASy Swiss-Prot
Match: MAOC_SOLLC (NADP-dependent malic enzyme, chloroplastic (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 363.614 bits (932), Expect = 5.962e-100
Identity = 181/235 (77.02%), Postives = 200/235 (85.11%), Query Frame = 1
Query:   16 IGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY 720
            IGLRQRRATGQEY+ELLDEFM AVKQNYGEKVLIQFEDFANHNAF LLAKYGT+HLVFNDDIQ                   +L+EH FLFLGAGEAGTGIAELIALE+SKQT  P+EETRKKI +VDSKGLIV SR + LQHFK+PWAH+HEPV  L++AVK IKPT+LIGSSG GRTFTKEV++AMA+FNEKP+I ALSNPTSQSECTAEEAY+WS+GRAIFASGSPF P EY
Sbjct:  229 IGLRQRRATGQEYSELLDEFMYAVKQNYGEKVLIQFEDFANHNAFNLLAKYGTSHLVFNDDIQGTASVVLAGLMAALNLVGGSLSEHTFLFLGAGEAGTGIAELIALEMSKQTGIPLEETRKKIWMVDSKGLIVKSRMEMLQHFKRPWAHDHEPVQELVNAVKSIKPTVLIGSSGAGRTFTKEVVQAMATFNEKPIIFALSNPTSQSECTAEEAYSWSEGRAIFASGSPFAPVEY 463          
BLAST of CX287963 vs. ExPASy Swiss-Prot
Match: MAOC_ORYSJ (NADP-dependent malic enzyme, chloroplastic OS=Oryza sativa subsp. japonica GN=ME6 PE=2 SV=2)

HSP 1 Score: 362.844 bits (930), Expect = 1.017e-99
Identity = 181/235 (77.02%), Postives = 201/235 (85.53%), Query Frame = 1
Query:   16 IGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY 720
            IGLRQRRATG+EY EL++EFMSAVKQ YGEKVLIQFEDFANHNAF+LLAKY  +HLVFNDDIQ                   TLAEH +LFLGAGEAGTGIAELIALEISKQTKAP+EE RKK+ L+DSKGLIV+SRK+SLQ FKKPWAHEHEPV  LLDAV+ IKPT+LIG+SGVG+TFTKEVIEAMASFNE+P+I +LSNPTS SECTAEEAY WS+GRA+FASGSPFDP EY
Sbjct:  294 IGLRQRRATGKEYHELMEEFMSAVKQIYGEKVLIQFEDFANHNAFDLLAKYSKSHLVFNDDIQGTASVVLAGLLSSLKVVGGTLAEHTYLFLGAGEAGTGIAELIALEISKQTKAPIEECRKKVWLLDSKGLIVNSRKESLQAFKKPWAHEHEPVTTLLDAVQSIKPTVLIGTSGVGKTFTKEVIEAMASFNERPVIFSLSNPTSHSECTAEEAYNWSQGRAVFASGSPFDPVEY 528          
BLAST of CX287963 vs. ExPASy Swiss-Prot
Match: MAOX_MESCR (NADP-dependent malic enzyme OS=Mesembryanthemum crystallinum GN=MOD1 PE=2 SV=1)

HSP 1 Score: 358.607 bits (919), Expect = 1.918e-98
Identity = 176/235 (74.89%), Postives = 199/235 (84.68%), Query Frame = 1
Query:   16 IGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY 720
            IGL+Q+RATG+EYAE + EFMSAVKQNYGEK+L+QFEDFANHNAFELL KY TTHLVFNDDIQ                   TLA+H+FLFLGAGEAGTGIAELIALE+SK+TKAPVE+ RKKI LVDSKGL+VSSRK++LQ FK PWAHEHEP+  L+DAV+ IKPT+LIG+SG G+ FTKEV+EAMA+ N KPLILALSNPTSQSECTAEEAYTWS+G AIFASGSPFDP EY
Sbjct:  240 IGLKQKRATGEEYAEFVQEFMSAVKQNYGEKILVQFEDFANHNAFELLEKYRTTHLVFNDDIQGTASVVLAGLIASLKLLGGTLADHKFLFLGAGEAGTGIAELIALEMSKKTKAPVEQMRKKIWLVDSKGLVVSSRKETLQQFKLPWAHEHEPITTLIDAVQAIKPTVLIGTSGKGKQFTKEVVEAMANINAKPLILALSNPTSQSECTAEEAYTWSQGHAIFASGSPFDPVEY 474          
BLAST of CX287963 vs. ExPASy Swiss-Prot
Match: MAOC_FLATR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria trinervia GN=MOD1 PE=2 SV=1)

HSP 1 Score: 358.221 bits (918), Expect = 2.505e-98
Identity = 176/235 (74.89%), Postives = 198/235 (84.26%), Query Frame = 1
Query:   16 IGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY 720
            IGL+Q+RA GQEYAEL++EFMSAVKQNYGE +LIQFEDFANHNAF+LL KY TTHLVFNDDIQ                   +LA+ +FLFLGAGEAGTGIAELIALEISKQT  P+EE+RKK+ LVDSKGLIV SR DSLQHFKKPWAH+HEPVN  LDA+K I+PT+LIGSSG G+TFTKEV+E M+S NEKP+ILALSNPTSQSECTAE+AYTWS+GRAIFASGSPF P EY
Sbjct:  303 IGLKQKRAAGQEYAELMNEFMSAVKQNYGENLLIQFEDFANHNAFDLLEKYRTTHLVFNDDIQGTASVVLGGLISALKLVGGSLADQKFLFLGAGEAGTGIAELIALEISKQTNIPLEESRKKVWLVDSKGLIVRSRLDSLQHFKKPWAHDHEPVNEFLDAIKTIRPTVLIGSSGTGQTFTKEVVETMSSLNEKPIILALSNPTSQSECTAEQAYTWSEGRAIFASGSPFKPVEY 537          
BLAST of CX287963 vs. ExPASy Swiss-Prot
Match: MAOC_MAIZE (NADP-dependent malic enzyme, chloroplastic OS=Zea mays GN=MOD1 PE=1 SV=1)

HSP 1 Score: 348.591 bits (893), Expect = 1.985e-95
Identity = 174/235 (74.04%), Postives = 195/235 (82.98%), Query Frame = 1
Query:   16 IGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY 720
            IGLRQ+RATG+EY EL++EFMSAVKQ YGEKVLIQFEDFANHNAF+LL KY  +HLVFNDDIQ                   TLAE  +LFLGAGEAGTGIAELIALEISKQT AP+EE RKK+ LVDSKGLIV SRK SLQ FKKPWAHEHEP+  L DAV+ IKPT+LIG+SGVGRTFTKE+IEAM+SFNE+P+I +LSNPTS SECTAE+AYTWS+GR+IFASGSPF P EY
Sbjct:  291 IGLRQKRATGEEYDELIEEFMSAVKQFYGEKVLIQFEDFANHNAFDLLEKYSKSHLVFNDDIQGTASVVLAGLLAALKMVGGTLAEQTYLFLGAGEAGTGIAELIALEISKQTNAPIEECRKKVWLVDSKGLIVDSRKGSLQPFKKPWAHEHEPLKTLYDAVQSIKPTVLIGTSGVGRTFTKEIIEAMSSFNERPIIFSLSNPTSHSECTAEQAYTWSQGRSIFASGSPFAPVEY 525          
BLAST of CX287963 vs. ExPASy Swiss-Prot
Match: MAOX_PIG (NADP-dependent malic enzyme (Fragment) OS=Sus scrofa GN=ME1 PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.138e-58
Identity = 123/232 (53.02%), Postives = 152/232 (65.52%), Query Frame = 1
Query:   16 IGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDP 711
            IGLRQRR  G EY + LDEFM AV   YG   LIQFEDFAN NAF LL KY   +  FNDDIQ                    L++   LF GAGEA  GIA LI + + K+   P E+  KKI LVDSKGLIV  R  +L + K+ +AHEHE + NL   V+ IKPT LIG + +G  F++++++ MA+FNE+P+I ALSNPTS++ECTAE  YT ++GRAIFASGSPFDP
Sbjct:  195 IGLRQRRVRGPEYDDFLDEFMEAVSSKYGMNCLIQFEDFANINAFRLLKKYQNQYCTFNDDIQGTASVAVAGILAALRITKNKLSDQTILFQGAGEAALGIAHLIVMAMEKEG-VPKEKAIKKIWLVDSKGLIVKGRA-ALTNEKEEFAHEHEEMKNLEAIVQDIKPTALIGVAAIGGAFSEQILKDMAAFNERPIIFALSNPTSKAECTAERGYTLTQGRAIFASGSPFDP 424          
The following BLAST results are available for this feature:
BLAST of CX287963 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAOX_VITVI6.155e-10581.28NADP-dependent malic enzyme OS=Vitis vinifera PE=2... [more]
MAOX_POPTR1.161e-10379.57NADP-dependent malic enzyme OS=Populus trichocarpa... [more]
MAOX_PHAVU4.411e-10380.00NADP-dependent malic enzyme OS=Phaseolus vulgaris ... [more]
MAOC_FLAPR9.827e-10379.15NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOC_SOLLC5.962e-10077.02NADP-dependent malic enzyme, chloroplastic (Fragme... [more]
MAOC_ORYSJ1.017e-9977.02NADP-dependent malic enzyme, chloroplastic OS=Oryz... [more]
MAOX_MESCR1.918e-9874.89NADP-dependent malic enzyme OS=Mesembryanthemum cr... [more]
MAOC_FLATR2.505e-9874.89NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOC_MAIZE1.985e-9574.04NADP-dependent malic enzyme, chloroplastic OS=Zea ... [more]
MAOX_PIG1.138e-5853.02NADP-dependent malic enzyme (Fragment) OS=Sus scro... [more]

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Properties
Property NameValue
Genbank descriptionC01015C09SK Veg1 Citrus clementina cDNA clone C01015C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287963 ID=CX287963; Name=CX287963; organism=Citrus clementina; type=EST; length=721bp
AATTCGGCACGAGGCATTGGTCTACGACAGAGGAGGGCAACCGGACAGGA
ATATGCTGAACTTCTAGATGAATTCATGAGTGCTGTCAAGCAAAATTATG
GAGAAAAAGTTCTTATACAGTTTGAGGATTTCGCAAACCACAATGCTTTT
GAGTTGCTTGCAAAATATGGCACAACTCATCTTGTCTTCAATGATGATAT
ACAGGGTACAGCGTCTGTTGTTCTTGCTGGGGTAGTTGCAGCACTGAAGT
TGATTGGTGGCACACTGGCCGAGCATAGATTTTTGTTTCTTGGAGCTGGG
GAGGCTGGGACTGGTATAGCTGAACTTATTGCGCTTGAGATATCAAAGCA
GACTAAAGCTCCTGTGGAAGAGACCCGGAAGAAGATATGTCTTGTAGACT
CAAAGGGACTGATAGTCAGCTCCCGGAAAGATTCACTTCAACACTTCAAG
AAGCCTTGGGCTCATGAACATGAGCCTGTCAACAATCTCTTAGATGCTGT
CAAGGTAATCAAGCCAACAATTTTGATTGGATCATCTGGAGTTGGAAGAA
CTTTTACAAAAGAAGTAATCGAGGCCATGGCCTCCTTCAATGAGAAACCT
CTCATCCTGGCTCTCTCCAACCCAACCTCACAGTCAGAATGTACAGCTGA
AGAAGCTTACACTTGGAGTAAGGGTCGTGCAATTTTCGCTAGTGGAAGTC
CATTTGATCCTTTTGAATACA
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