CX287975

Overview
NameCX287975
Unique NameCX287975
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length668
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287975 vs. ExPASy Swiss-Prot
Match: GDL67_ARATH (GDSL esterase/lipase At4g28780 OS=Arabidopsis thaliana GN=At4g28780 PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.382e-52
Identity = 107/177 (60.45%), Postives = 122/177 (68.93%), Query Frame = 3
Query:  138 FFVFGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFISWVLLIDRILNLCVVCYIYM*FFFIV**LD*L*HINICVRICAGQHIGSEPTLPYLSPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILI 668
            FFVFGDSLVD+GNNNYL TTARADSPPYGIDYPT RPTGRFSNGLN+PD IS                                           + IGSEPTLP LSPELTG +LL+GANFASAGIGILNDTG+QF+NI+R+ RQFE FQEYQ RV+ +IG  +T+QLVNGAL+L+
Sbjct:   32 FFVFGDSLVDSGNNNYLVTTARADSPPYGIDYPTGRPTGRFSNGLNLPDIIS-------------------------------------------EQIGSEPTLPILSPELTGEKLLIGANFASAGIGILNDTGVQFLNILRIGRQFELFQEYQERVSEIIGSDKTQQLVNGALVLM 165          
BLAST of CX287975 vs. ExPASy Swiss-Prot
Match: LTL1_ARATH (GDSL esterase/lipase LTL1 OS=Arabidopsis thaliana GN=LTL1 PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.294e-50
Identity = 108/177 (61.02%), Postives = 119/177 (67.23%), Query Frame = 3
Query:  138 FFVFGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFISWVLLIDRILNLCVVCYIYM*FFFIV**LD*L*HINICVRICAGQHIGSEPTLPYLSPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILI 668
            FFVFGDSLVDNGNN+YL TTARAD+ PYGIDYPTRRPTGRFSNGLNIPD IS                                           + IG   TLPYLSP LTG  LLVGANFASAGIGILNDTGIQFVNIIR+ +Q EYF++YQ RV+ALIGP+ T+QLVN AL+LI
Sbjct:   30 FFVFGDSLVDNGNNDYLVTTARADNYPYGIDYPTRRPTGRFSNGLNIPDIIS-------------------------------------------EAIGMPSTLPYLSPHLTGENLLVGANFASAGIGILNDTGIQFVNIIRISKQMEYFEQYQLRVSALIGPEATQQLVNQALVLI 163          
BLAST of CX287975 vs. ExPASy Swiss-Prot
Match: GDL77_ARATH (GDSL esterase/lipase At5g18430 OS=Arabidopsis thaliana GN=At5g18430 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.697e-48
Identity = 104/178 (58.43%), Postives = 119/178 (66.85%), Query Frame = 3
Query:  138 FFVFGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFISWVLLIDRILNLCVVCYIYM*FFFIV**LD*L*HINICVRICAGQHIGSE-PTLPYLSPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILI 668
            FFVFGDSLVD+GNNNYL TTARADSPPYGID+PTRRPTGRFSNGLNIPD IS                                           + IG+E P LPYLSPEL G  LL GANFASAGIGILNDTG QF+NIIRM++Q +YFQ+YQ RV+ LIG  +T++LV+ AL+LI
Sbjct:   29 FFVFGDSLVDSGNNNYLVTTARADSPPYGIDFPTRRPTGRFSNGLNIPDLIS-------------------------------------------EAIGNEEPPLPYLSPELRGRSLLNGANFASAGIGILNDTGFQFINIIRMYQQLDYFQQYQQRVSRLIGKPQTQRLVSQALVLI 163          
BLAST of CX287975 vs. ExPASy Swiss-Prot
Match: GDL79_ARATH (GDSL esterase/lipase At5g33370 OS=Arabidopsis thaliana GN=At5g33370 PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.061e-44
Identity = 95/177 (53.67%), Postives = 114/177 (64.41%), Query Frame = 3
Query:  138 FFVFGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFISWVLLIDRILNLCVVCYIYM*FFFIV**LD*L*HINICVRICAGQHIGSEPTLPYLSPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILI 668
            F VFGDSLVDNGNN++LATTARAD+ PYGID+PT RPTGRFSNGLNIPD IS                                           +H+G E  +PYLSP L   +LL GANFASAGIGILNDTGIQF+NIIR+ +Q EYF++Y+ RV+ L+G +   +LVNGAL+LI
Sbjct:   31 FLVFGDSLVDNGNNDFLATTARADNYPYGIDFPTHRPTGRFSNGLNIPDLIS-------------------------------------------EHLGQESPMPYLSPMLKKDKLLRGANFASAGIGILNDTGIQFLNIIRITKQLEYFEQYKVRVSGLVGEEEMNRLVNGALVLI 164          
BLAST of CX287975 vs. ExPASy Swiss-Prot
Match: GDL58_ARATH (GDSL esterase/lipase At3g50400 OS=Arabidopsis thaliana GN=At3g50400 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.262e-21
Identity = 64/172 (37.21%), Postives = 85/172 (49.42%), Query Frame = 3
Query:  141 FVFGDSLVDNGNNNYLATTARADSPPYGIDY-PTR-RPTGRFSNGLNIPDFISWVLLIDRILNLCVVCYIYM*FFFIV**LD*L*HINICVRICAGQHIGSEP-TLPYLSPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLV 647
            FVFGDSLVD GNNNYL T +RA+SPP GID+ P+R  PTGRF+NG  I D +                                           G+ +G +   +PYL+P  +G  LL G N+AS G GILN TG  FVN + M  Q +YF   + +   L+G  + +  +
Sbjct:   36 FVFGDSLVDAGNNNYLQTLSRANSPPNGIDFKPSRGNPTGRFTNGRTIADIV-------------------------------------------GEKLGQQSYAVPYLAPNASGEALLNGVNYASGGGGILNATGSVFVNRLGMDIQVDYFTNTRKQFDKLLGQDKARDYI 164          
BLAST of CX287975 vs. ExPASy Swiss-Prot
Match: GDL81_ARATH (GDSL esterase/lipase At5g41890 OS=Arabidopsis thaliana GN=At5g41890 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.436e-19
Identity = 57/179 (31.84%), Postives = 86/179 (48.04%), Query Frame = 3
Query:  141 FVFGDSLVDNGNNNYLATTARADSPPYGIDY--PTRRPTGRFSNGLNIPDFISWVLLIDRILNLCVVCYIYM*FFFIV**LD*L*HINICVRICAGQHIGSE-PTLPYLSPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILI 668
            F+FGDSLVD GNNNY+ T ++ADS PYGID+     +PTGRF+NG  I D +                                           G+ +G++ P  PYL P    + +  G N+AS   GIL+DTG+ F+  + +  Q   F++ +  +  +IG   TK+++  A+  I
Sbjct:   27 FIFGDSLVDVGNNNYIFTLSKADSSPYGIDFAPSNGQPTGRFTNGRTISDIV-------------------------------------------GEALGAKSPPPPYLEPNTEANTIRNGINYASGAAGILDDTGLLFIGRVPLREQVSNFEKSREYMVRVIGENGTKEMLKNAMFTI 162          
BLAST of CX287975 vs. ExPASy Swiss-Prot
Match: GDL64_ARATH (GDSL esterase/lipase At4g16230 OS=Arabidopsis thaliana GN=At4g16230 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.462e-17
Identity = 61/176 (34.66%), Postives = 80/176 (45.45%), Query Frame = 3
Query:  141 FVFGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFISWVLLIDRILNLCVVCYIYM*FFFIV**LD*L*HINICVRICAGQHIGSEPTLPYLSPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILI 668
            FVFGDSLVD GNNNYLAT ++A+  P GID+ +  PTGRF+NG  I D +   L  D                                          E T PYL+P  +GS +L G N+AS G GILN TG  F   I +  Q + F   +  + + IG     +L   A+  +
Sbjct:   32 FVFGDSLVDAGNNNYLATLSKANYVPNGIDFGS--PTGRFTNGRTIVDIVYQALGSD------------------------------------------ELTPPYLAPTTSGSLILNGVNYASGGSGILNSTGKLFGERINVDAQLDNFATTRQDIISWIGESEAAKLFRSAIFSV 163          
BLAST of CX287975 vs. ExPASy Swiss-Prot
Match: GDL1_ARATH (GDSL esterase/lipase At1g06990 OS=Arabidopsis thaliana GN=At1g06990 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 4.200e-17
Identity = 53/175 (30.29%), Postives = 84/175 (48.00%), Query Frame = 3
Query:  144 VFGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFISWVLLIDRILNLCVVCYIYM*FFFIV**LD*L*HINICVRICAGQHIGSEPTLPYLSPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILI 668
            VFGDS +D GNNNY+ T  RA+ PPYG ++P    TGRFSNG  IPDFI+ ++ I                                           +   P+L P L+ S ++ G  FASAG G  N T  +  + + + +Q +  + Y  R++ ++G ++   +V+ AL+++
Sbjct:   40 VFGDSTIDTGNNNYIKTYIRANFPPYGCNFPGHNATGRFSNGKLIPDFIASLMGI------------------------------------------KDTVPPFLDPHLSDSDIITGVCFASAGSGYDNLTD-RATSTLSVDKQADMLRSYVERLSQIVGDEKAASIVSEALVIV 171          
BLAST of CX287975 vs. ExPASy Swiss-Prot
Match: GDL34_ARATH (GDSL esterase/lipase At2g04570 OS=Arabidopsis thaliana GN=At2g04570 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.596e-16
Identity = 56/176 (31.82%), Postives = 80/176 (45.45%), Query Frame = 3
Query:  144 VFGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFISWVLLIDRILNLCVVCYIYM*FFFIV**LD*L*HINICVRICAGQHIGSEPTLP-YLSPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILI 668
            VFGDS VD GNNNY+ T AR++  PYG D+   +PTGRF NG    DF+S                                           + +G +P +P YL P    S    G  FASA  G  N T    ++++ +++Q EY++EYQ ++ A  G  R  + +  +L LI
Sbjct:   31 VFGDSSVDAGNNNYIPTVARSNFEPYGRDFVGGKPTGRFCNGKIATDFMS-------------------------------------------EALGLKPIIPAYLDPSYNISDFATGVTFASAATGYDNATS-DVLSVLPLWKQLEYYKEYQTKLKAYQGKDRGTETIESSLYLI 162          
BLAST of CX287975 vs. ExPASy Swiss-Prot
Match: GDL75_ARATH (GDSL esterase/lipase At5g08460 OS=Arabidopsis thaliana GN=At5g08460 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.010e-15
Identity = 55/176 (31.25%), Postives = 80/176 (45.45%), Query Frame = 3
Query:  141 FVFGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFISWVLLIDRILNLCVVCYIYM*FFFIV**LD*L*HINICVRICAGQHIGSEPTLPYLSPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILI 668
            FVFGDSLVDNGNNN+L + AR++  PYGID+   +PTGRFSNG  I DFI                                           G+ +G      ++     G  +L G N+ASA  GIL +TG        M RQ E F++    ++  +  +  K+ +  +L+++
Sbjct:   51 FVFGDSLVDNGNNNHLNSLARSNYLPYGIDFAGNQPTGRFSNGKTIVDFI-------------------------------------------GELLGLPEIPAFMDTVDGGVDILHGVNYASAAGGILEETGRHLGERFSMGRQVENFEKTLMEISRSMRKESVKEYMAKSLVVV 183          
The following BLAST results are available for this feature:
BLAST of CX287975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
GDL67_ARATH1.382e-5260.45GDSL esterase/lipase At4g28780 OS=Arabidopsis thal... [more]
LTL1_ARATH1.294e-5061.02GDSL esterase/lipase LTL1 OS=Arabidopsis thaliana ... [more]
GDL77_ARATH2.697e-4858.43GDSL esterase/lipase At5g18430 OS=Arabidopsis thal... [more]
GDL79_ARATH1.061e-4453.67GDSL esterase/lipase At5g33370 OS=Arabidopsis thal... [more]
GDL58_ARATH6.262e-2137.21GDSL esterase/lipase At3g50400 OS=Arabidopsis thal... [more]
GDL81_ARATH3.436e-1931.84GDSL esterase/lipase At5g41890 OS=Arabidopsis thal... [more]
GDL64_ARATH2.462e-1734.66GDSL esterase/lipase At4g16230 OS=Arabidopsis thal... [more]
GDL1_ARATH4.200e-1730.29GDSL esterase/lipase At1g06990 OS=Arabidopsis thal... [more]
GDL34_ARATH1.596e-1631.82GDSL esterase/lipase At2g04570 OS=Arabidopsis thal... [more]
GDL75_ARATH3.010e-1531.25GDSL esterase/lipase At5g08460 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC01015D10SK Veg1 Citrus clementina cDNA clone C01015D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287975 ID=CX287975; Name=CX287975; organism=Citrus clementina; type=EST; length=668bp
GCAAGCTTAGATTTTCTAGGATTCGCGTTAAATATAATACAATGGCAAGC
TCATTTGTTTTTGGTGTACGGACAATTTTAGGTCTTGTGATGGCATTGGG
AGCTTTGGCTCCTCAAGCTGCGGAGGCCGCTCGTGCTTTCTTTGTGTTTG
GTGATTCACTTGTTGACAATGGCAACAATAACTACTTGGCCACCACTGCT
CGGGCTGATTCTCCACCGTACGGCATTGATTATCCGACTCGCCGACCCAC
AGGAAGATTCTCCAATGGCCTAAACATTCCTGATTTCATCAGTTGGGTTC
TTTTAATTGATCGTATTCTTAATCTTTGTGTTGTTTGTTATATATATATG
TGATTTTTTTTTATTGTATAGTAACTTGACTAGCTATAACACATTAATAT
ATGTGTCCGTATATGTGCAGGTCAGCACATTGGTTCGGAGCCCACATTGC
CGTATTTGAGTCCAGAGCTCACTGGGTCTAGACTACTTGTTGGAGCCAAT
TTTGCTTCTGCTGGAATTGGAATACTCAATGACACCGGAATTCAATTTGT
AAACATAATTAGAATGTTCAGGCAATTCGAATACTTCCAAGAATATCAGA
ACCGGGTTACAGCTTTAATCGGACCGCAGCGGACTAAGCAACTTGTTAAT
GGAGCACTCATCCTCATC
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