CX287992

Overview
NameCX287992
Unique NameCX287992
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287992 vs. ExPASy Swiss-Prot
Match: PARK7_MESAU (Protein DJ-1 OS=Mesocricetus auratus GN=PARK7 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.813e-30
Identity = 77/186 (41.40%), Postives = 115/186 (61.83%), Query Frame = 2
Query:   83 KRVLVPVANGSEPIESVITIDVLRRSGADVTVASVEKQLRVDACHGVKIVADALVSDCR-DAVFDLIALPGGMPGATNLKESEVLESIVKKQASAGRLYAAVCASPAVALGSWGLLKDLKATCYPSFMEQLAPACAATV-ESRIQQDGKVVTSCGPGTTMEFAVALVEQLYGKEKADEVSGPLVMR 634
            KR LV +A G+E +E+VI +D++RR+G  VTVA +  +  V     V I  D  + D +    +D++ LPGG  GA NL ES V++ I+K+Q S   L AA+CA P  AL +  +    K T +P   +++      +  ESR+++DG ++TS GPGT+ EFA+A+VE L GKE AD+V  PLV++
Sbjct:    4 KRALVILAKGAEEMETVIPVDIMRRAGIKVTVAGLAGKDPVQCSRDVMICPDTSLEDAKKQGPYDVVVLPGGNLGAQNLSESPVVKEILKEQESRKGLIAAICAGPT-ALLAHEIGFGSKVTTHPGAKDKMMNGSHYSYSESRVEKDGLILTSRGPGTSFEFALAIVEALSGKEAADQVKAPLVLK 188          
BLAST of CX287992 vs. ExPASy Swiss-Prot
Match: PARK7_CHICK (Protein DJ-1 OS=Gallus gallus GN=PARK7 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.449e-29
Identity = 79/188 (42.02%), Postives = 115/188 (61.17%), Query Frame = 2
Query:   83 KRVLVPVANGSEPIESVITIDVLRRSGADVTVASVEKQLRVDACHGVKIVADALVSDCR-DAVFDLIALPGGMPGATNLKESEVLESIVKKQASAGRLYAAVCASPAVALGSWGLLKDLKATCYPSFMEQL---APACAATVESRIQQDGKVVTSCGPGTTMEFAVALVEQLYGKEKADEVSGPLVMR 634
            KR LV +A G+E +E+VI  DV+RR+G  VTVA +  +  V     V I  DA + D R +  +D+I LPGG  GA NL ES  ++ I+K Q S   L AA+CA P  AL + G+    K   +P   +++   A  C +  ESR+++DG ++TS GPGT+ EF +A+VE L GKE A++V  PL+++
Sbjct:    4 KRALVILAKGAEEMETVIPTDVMRRAGIKVTVAGLTGKEPVQCSRDVLICPDASLEDARKEGPYDVIVLPGGNLGAQNLSESAAVKDILKDQESRKGLIAAICAGPT-ALLAHGIGFGSKVITHPLAKDKMMNGAHYCYS--ESRVEKDGNILTSRGPGTSFEFGLAIVEALMGKEVAEQVKAPLILK 188          
BLAST of CX287992 vs. ExPASy Swiss-Prot
Match: PARK7_MOUSE (Protein DJ-1 OS=Mus musculus GN=Park7 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.191e-29
Identity = 75/186 (40.32%), Postives = 115/186 (61.83%), Query Frame = 2
Query:   83 KRVLVPVANGSEPIESVITIDVLRRSGADVTVASVEKQLRVDACHGVKIVADALVSDCR-DAVFDLIALPGGMPGATNLKESEVLESIVKKQASAGRLYAAVCASPAVALGSWGLLKDLKATCYPSFMEQLAPACAATV-ESRIQQDGKVVTSCGPGTTMEFAVALVEQLYGKEKADEVSGPLVMR 634
            KR LV +A G+E +E+VI +DV+RR+G  VTVA +  +  V     V I  D  + D +    +D++ LPGG  GA NL ES +++ I+K+Q S   L AA+CA P  AL +  +    K T +P   +++      +  ESR+++DG ++TS GPGT+ EFA+A+VE L GK+ A++V  PLV++
Sbjct:    4 KRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVMICPDTSLEDAKTQGPYDVVVLPGGNLGAQNLSESPMVKEILKEQESRKGLIAAICAGPT-ALLAHEVGFGCKVTTHPLAKDKMMNGSHYSYSESRVEKDGLILTSRGPGTSFEFALAIVEALVGKDMANQVKAPLVLK 188          
BLAST of CX287992 vs. ExPASy Swiss-Prot
Match: PARK7_HUMAN (Protein DJ-1 OS=Homo sapiens GN=PARK7 PE=1 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.227e-28
Identity = 76/186 (40.86%), Postives = 115/186 (61.83%), Query Frame = 2
Query:   83 KRVLVPVANGSEPIESVITIDVLRRSGADVTVASVEKQLRVDACHGVKIVADALVSDCR-DAVFDLIALPGGMPGATNLKESEVLESIVKKQASAGRLYAAVCASPAVALGSWGLLKDLKATCYPSFMEQLAPACAATV-ESRIQQDGKVVTSCGPGTTMEFAVALVEQLYGKEKADEVSGPLVMR 634
            KR LV +A G+E +E+VI +DV+RR+G  VTVA +  +  V     V I  DA + D + +  +D++ LPGG  GA NL ES  ++ I+K+Q +   L AA+CA P  AL +  +    K T +P   +++      T  E+R+++DG ++TS GPGT+ EFA+A+VE L GKE A +V  PLV++
Sbjct:    4 KRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAKKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGPT-ALLAHEIGFGSKVTTHPLAKDKMMNGGHYTYSENRVEKDGLILTSRGPGTSFEFALAIVEALNGKEVAAQVKAPLVLK 188          
BLAST of CX287992 vs. ExPASy Swiss-Prot
Match: PARK7_BOVIN (Protein DJ-1 OS=Bos taurus GN=PARK7 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.227e-28
Identity = 75/186 (40.32%), Postives = 114/186 (61.29%), Query Frame = 2
Query:   83 KRVLVPVANGSEPIESVITIDVLRRSGADVTVASVEKQLRVDACHGVKIVADALVSDCR-DAVFDLIALPGGMPGATNLKESEVLESIVKKQASAGRLYAAVCASPAVALGSWGLLKDLKATCYPSFMEQLAPACAATV-ESRIQQDGKVVTSCGPGTTMEFAVALVEQLYGKEKADEVSGPLVMR 634
            KR LV +A G+E +E+VI +DV+RR+G  VTVA +  +  V     V I  DA + D + +  +D++ LPGG  GA NL ES  ++ I+K+Q     L AA+CA P  AL +  +    K T +P   +++      +  E+R+++DG ++TS GPGT+ EFA+ +VE L GKE AD+V  PLV++
Sbjct:    4 KRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAKKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQEKRKGLIAAICAGPT-ALLAHEIGFGSKVTTHPLAKDKMMNGSHYSYSENRVEKDGLILTSRGPGTSFEFALKIVEVLVGKEVADQVKAPLVLK 188          
BLAST of CX287992 vs. ExPASy Swiss-Prot
Match: PARK7_DANRE (Protein DJ-1 OS=Danio rerio GN=park7 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.602e-28
Identity = 73/186 (39.25%), Postives = 112/186 (60.22%), Query Frame = 2
Query:   83 KRVLVPVANGSEPIESVITIDVLRRSGADVTVASVEKQLRVDACHGVKIVADALVSDC-RDAVFDLIALPGGMPGATNLKESEVLESIVKKQASAGRLYAAVCASPAVALGSWGLLKDLKATCYPSFMEQL-APACAATVESRIQQDGKVVTSCGPGTTMEFAVALVEQLYGKEKADEVSGPLVMR 634
            KR LV +A G+E +E+VI +DV+RR+G  VTVA +  +  V     V I  D+ + D  +   +D++ LPGG+ GA NL ES  ++ ++K Q     L AA+CA P  AL + G+      T +P   +++ A       E+R+Q+DG V+TS GPGT+ EFA+ +VE+L G E A +V  PL+++
Sbjct:    4 KRALVILAKGAEEMETVIPVDVMRRAGIAVTVAGLAGKEPVQCSREVMICPDSSLEDAHKQGPYDVVLLPGGLLGAQNLSESPAVKEVLKDQEGRKGLIAAICAGPT-ALLAHGIAYGSTVTTHPGAKDKMMAGDHYKYSEARVQKDGNVITSRGPGTSFEFALTIVEELMGAEVAAQVKAPLILK 188          
BLAST of CX287992 vs. ExPASy Swiss-Prot
Match: PARK7_CERAE (Protein DJ-1 OS=Cercopithecus aethiops GN=PARK7 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.602e-28
Identity = 75/186 (40.32%), Postives = 115/186 (61.83%), Query Frame = 2
Query:   83 KRVLVPVANGSEPIESVITIDVLRRSGADVTVASVEKQLRVDACHGVKIVADALVSDCR-DAVFDLIALPGGMPGATNLKESEVLESIVKKQASAGRLYAAVCASPAVALGSWGLLKDLKATCYPSFMEQLAPACAATV-ESRIQQDGKVVTSCGPGTTMEFAVALVEQLYGKEKADEVSGPLVMR 634
            KR LV +A G+E +E+VI +DV+RR+G  VT+A +  +  V     V I  DA + D + +  +D++ LPGG  GA NL ES  ++ I+K+Q +   L AA+CA P  AL +  +    K T +P   +++      T  E+R+++DG ++TS GPGT+ EFA+A+VE L GKE A +V  PLV++
Sbjct:    4 KRALVILAKGAEEMETVIPVDVMRRAGIKVTIAGLAGKDPVQCSRDVVICPDASLEDAKKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGPT-ALLAHEIGFGSKVTTHPLAKDKMMNGGHYTYSENRVEKDGLILTSRGPGTSFEFALAIVEALNGKEVAAQVKAPLVLK 188          
BLAST of CX287992 vs. ExPASy Swiss-Prot
Match: PARK7_RAT (Protein DJ-1 OS=Rattus norvegicus GN=Park7 PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.038e-27
Identity = 72/186 (38.71%), Postives = 115/186 (61.83%), Query Frame = 2
Query:   83 KRVLVPVANGSEPIESVITIDVLRRSGADVTVASVEKQLRVDACHGVKIVADALVSDCR-DAVFDLIALPGGMPGATNLKESEVLESIVKKQASAGRLYAAVCASPAVALGSWGLLKDLKATCYPSFMEQLAPACAATV-ESRIQQDGKVVTSCGPGTTMEFAVALVEQLYGKEKADEVSGPLVMR 634
            KR LV +A G+E +E+VI +D++RR+G  VTVA +  +  V     V I  D  + + +    +D++ LPGG  GA NL ES +++ I+K+Q +   L AA+CA P  AL +  +    K T +P   +++      +  ESR+++DG ++TS GPGT+ EFA+A+VE L GK+ A++V  PLV++
Sbjct:    4 KRALVILAKGAEEMETVIPVDIMRRAGIKVTVAGLAGKDPVQCSRDVVICPDTSLEEAKTQGPYDVVVLPGGNLGAQNLSESALVKEILKEQENRKGLIAAICAGPT-ALLAHEVGFGCKVTSHPLAKDKMMNGSHYSYSESRVEKDGLILTSRGPGTSFEFALAIVEALSGKDMANQVKAPLVLK 188          
BLAST of CX287992 vs. ExPASy Swiss-Prot
Match: THIJ_ECOLI (Protein thiJ OS=Escherichia coli (strain K12) GN=thiJ PE=1 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 4.363e-26
Identity = 73/186 (39.25%), Postives = 112/186 (60.22%), Query Frame = 2
Query:   92 LVPVANGSEPIESVITIDVLRRSGADVTVASV--EKQLRVDACHGVKIVADALVSDCRDAVFDLIALPGGMPGATNLKESEVLESIVKKQASAGRLYAAVCASPAVALGSWGLLKDLKATCYPSFMEQLAPACAATVESRIQQDG--KVVTSCGPGTTMEFAVALVEQLYGKEKADEVSGPLVMRA 637
            LV +A GSE  E+V TID+L R G  VT ASV  +  L +    GVK++ADA + +  D  +D+I LPGG+ GA   ++S +L   VK+   +GR+ AA+CA+PA  L    +      T +P+  +++ PA    ++ R+  D   K++TS GPGT ++F + +++ L G+EKA EV+  LVM A
Sbjct:    6 LVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIGNMTGFPTLKDKI-PA-EQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLVGREKAHEVASQLVMAA 189          
BLAST of CX287992 vs. ExPASy Swiss-Prot
Match: THIJ_SALTY (Protein thiJ OS=Salmonella typhimurium GN=thiJ PE=3 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 6.300e-25
Identity = 72/188 (38.30%), Postives = 112/188 (59.57%), Query Frame = 2
Query:   86 RVLVPVANGSEPIESVITIDVLRRSGADVTVASV--EKQLRVDACHGVKIVADALVSDCRDAVFDLIALPGGMPGATNLKESEVLESIVKKQASAGRLYAAVCASPAVALGSWGLLKDLKATCYPSFMEQLAPACAATVESRIQQDG--KVVTSCGPGTTMEFAVALVEQLYGKEKADEVSGPLVMRA 637
            + LV +A GSE  E+V TID+L R G  VT ASV  +  L +    GVK++ADA + +  D  +D+I LPGG+ GA   ++S +L   VK+   +GR+ AA+CA+ A  L    +      T +P+  +++ PA    ++ R+  D   K++TS GPGT ++F + +++ L G+EKA EV+  LVM A
Sbjct:    4 QALVCLAPGSEETEAVTTIDLLVRGGIHVTTASVASDGNLTIVCSRGVKLLADAPLVEVADGDYDIIVLPGGIKGAECFRDSPLLVETVKQFHRSGRIVAAICAAAATVLVPHDIFPIGNMTGFPALKDKI-PA-EQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLAGREKAHEVASQLVMAA 189          
The following BLAST results are available for this feature:
BLAST of CX287992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
PARK7_MESAU3.813e-3041.40Protein DJ-1 OS=Mesocricetus auratus GN=PARK7 PE=1... [more]
PARK7_CHICK1.449e-2942.02Protein DJ-1 OS=Gallus gallus GN=PARK7 PE=2 SV=1[more]
PARK7_MOUSE7.191e-2940.32Protein DJ-1 OS=Mus musculus GN=Park7 PE=1 SV=1[more]
PARK7_HUMAN1.227e-2840.86Protein DJ-1 OS=Homo sapiens GN=PARK7 PE=1 SV=2[more]
PARK7_BOVIN1.227e-2840.32Protein DJ-1 OS=Bos taurus GN=PARK7 PE=2 SV=1[more]
PARK7_DANRE1.602e-2839.25Protein DJ-1 OS=Danio rerio GN=park7 PE=2 SV=1[more]
PARK7_CERAE1.602e-2840.32Protein DJ-1 OS=Cercopithecus aethiops GN=PARK7 PE... [more]
PARK7_RAT1.038e-2738.71Protein DJ-1 OS=Rattus norvegicus GN=Park7 PE=1 SV... [more]
THIJ_ECOLI4.363e-2639.25Protein thiJ OS=Escherichia coli (strain K12) GN=t... [more]
THIJ_SALTY6.300e-2538.30Protein thiJ OS=Salmonella typhimurium GN=thiJ PE=... [more]
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Properties
Property NameValue
Genbank descriptionC01015F04SK Veg1 Citrus clementina cDNA clone C01015F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287992 ID=CX287992; Name=CX287992; organism=Citrus clementina; type=EST; length=723bp
AACATTTTCTCCCAAACAAATTCCTTCTTTGAAATATCGCATTTTCTCCT
TCACAGCAGCAGCTACAACGTCTTCAACTTCCAAAAGGGTTTTGGTGCCT
GTTGCGAACGGGAGTGAGCCGATTGAGTCCGTGATAACGATCGATGTTTT
GAGAAGGTCTGGAGCTGACGTCACGGTTGCGTCTGTGGAGAAACAGCTTC
GGGTCGACGCGTGTCATGGTGTCAAGATTGTCGCTGATGCTCTCGTGTCT
GACTGCCGCGACGCCGTTTTTGATCTTATAGCTCTTCCCGGTGGCATGCC
TGGTGCTACCAATCTGAAAGAATCTGAAGTATTAGAAAGCATTGTGAAGA
AGCAGGCCTCAGCTGGGCGTCTTTATGCTGCTGTCTGTGCTTCACCTGCA
GTGGCATTAGGGTCTTGGGGTCTGTTGAAGGATTTGAAGGCTACTTGTTA
TCCGTCATTTATGGAGCAATTAGCTCCTGCTTGTGCAGCAACTGTTGAAT
CAAGAATACAGCAGGATGGTAAAGTTGTTACGAGTTGTGGACCGGGCACT
ACCATGGAGTTTGCCGTTGCACTTGTTGAGCAGTTGTATGGGAAAGAGAA
AGCTGATGAAGTTTCTGGGCCACTGGTAATGCGTGCAAATCGTGGAGATG
AATACACTATTGCTGAGTTCAATCCAATTCAGTGGACATTTGACAATTCT
CCTCAGAAAAGCTTGCTCGTCTC
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